CF417147 | Citrus Genome Database

Overview


Name	CF417147
Unique Name	CF417147
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	694

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.9593 bits (206), Expect = 9.498e-24
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 46.9802 bits (110), Expect = 9.498e-24
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TLADYNIQKESTLHLVLRLRGG
Sbjct:   55 TLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVESSDTIDNVKAKIQ    GIPPDQ +        LEDGRTLADYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.9593 bits (206), Expect = 9.498e-24
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 46.9802 bits (110), Expect = 9.498e-24
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TLADYNIQKESTLHLVLRLRGG
Sbjct:   55 TLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVESSDTIDNVKAKIQ    GIPPDQ +        LEDGRTLADYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.9593 bits (206), Expect = 9.498e-24
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 46.9802 bits (110), Expect = 9.498e-24
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TLADYNIQKESTLHLVLRLRGG
Sbjct:   55 TLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVESSDTIDNVKAKIQ    GIPPDQ +        LEDGRTLADYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.9593 bits (206), Expect = 9.498e-24
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 46.9802 bits (110), Expect = 9.498e-24
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TLADYNIQKESTLHLVLRLRGG
Sbjct:   55 TLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVESSDTIDNVKAKIQ    GIPPDQ +        LEDGRTLADYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.9593 bits (206), Expect = 9.498e-24
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 46.9802 bits (110), Expect = 9.498e-24
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TLADYNIQKESTLHLVLRLRGG
Sbjct:   55 TLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVESSDTIDNVKAKIQ    GIPPDQ +        LEDGRTLADYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.9593 bits (206), Expect = 9.498e-24
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 46.9802 bits (110), Expect = 9.498e-24
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TLADYNIQKESTLHLVLRLRGG
Sbjct:   55 TLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVESSDTIDNVKAKIQ    GIPPDQ +        LEDGRTLADYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.9593 bits (206), Expect = 9.498e-24
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 46.9802 bits (110), Expect = 9.498e-24
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TLADYNIQKESTLHLVLRLRGG
Sbjct:   55 TLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVESSDTIDNVKAKIQ    GIPPDQ +        LEDGRTLADYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.9593 bits (206), Expect = 9.498e-24
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 46.9802 bits (110), Expect = 9.498e-24
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TLADYNIQKESTLHLVLRLRGG
Sbjct:   55 TLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVESSDTIDNVKAKIQ    GIPPDQ +        LEDGRTLADYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_MAIZE (Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.9593 bits (206), Expect = 9.498e-24
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 46.9802 bits (110), Expect = 9.498e-24
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TLADYNIQKESTLHLVLRLRGG
Sbjct:   55 TLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVESSDTIDNVKAKIQ    GIPPDQ +        LEDGRTLADYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CF417147 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query:    1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 225
            QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 83.9593 bits (206), Expect = 9.498e-24
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 2

Query:  257 KQLLLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388
            K + LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct:   11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 3 Score: 46.9802 bits (110), Expect = 9.498e-24
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3

Query:  390 TLADYNIQKESTLHLVLRLRGG 455
            TLADYNIQKESTLHLVLRLRGG
Sbjct:   55 TLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 1

Query:  484 GKPSTLEVESSDTIDNVKAKIQX*XRGIPPDQPEG*SLLENNLEDGRTLADYNIQKESTLHLVLR 678
            GK  TLEVESSDTIDNVKAKIQ    GIPPDQ +        LEDGRTLADYNIQKESTLHLVLR
Sbjct:   10 GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ-QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

The following BLAST results are available for this feature:

BLAST of CF417147 vs. ExPASy Swiss-Prot

BLAST of CF417147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92


Match Name	E-value	Identity	Description
UBIQ_WHEAT	2.835e-35	100.00	Ubiquitin OS=Triticum aestivum PE=3 SV=1	[more]
UBIQ_SOYBN	2.835e-35	100.00	Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1	[more]
UBIQ_SOLTU	2.835e-35	100.00	Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1	[more]
UBIQ_SOLLC	2.835e-35	100.00	Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=...	[more]
UBIQ_PETCR	2.835e-35	100.00	Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3...	[more]
UBIQ_PEA	2.835e-35	100.00	Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1	[more]
UBIQ_ORYSJ	2.835e-35	100.00	Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 ...	[more]
UBIQ_NICSY	2.835e-35	100.00	Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE...	[more]
UBIQ_MAIZE	2.835e-35	100.00	Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1	[more]
UBIQ_LUPPO	2.835e-35	100.00	Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_115000-077 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_H10 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417147 ID=CF417147; Name=CF417147; organism=Citrus sinensis; type=EST; length=694bp
CAGATTTTTGTGAAAACCCTGACTGGTAAGACTATAACTTTGGAGGTTGA
AAGCTCTGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGG
GCATCCCACCTGATCAACAGAGGTTAATCTTTGCCGGCAAACAACTTGAA
GATGGTCGTACTCTTGCTGACTACAACATCCAGAAGGAGTCAACCCTCCA
TTTGGTGCTTCGTCTCCGTGGTGGCATGCAGATCTTTGTGAAAACCCTCA
CCGGAAAAACAATTACTCTTGGAGGTTGAAAGTTCTGACACCATCGACAA
CGTGAAAGCAAAAATTCAAGACAAGGAGGGTATCCCACCAGATCAGCAGA
GGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGGACTCTTGCAGA
CTATAACATCCAGAAAGAATCCACTCTTCACTTGGTTCTTCGCCTCCGTG
GTGGTATGCAGATTTTTGTGAAGACACTCACTGGGAAAACCATCCACATT
GGAGGTTGAGAGTTCGGACACAATTGACAATGTGAAGGCTAAGATCCAGN
GATAANGGAGGGGGATTCCCCCAGACCAGCCAGAAGGTTGATCTTTGCTG
GAAAACAACTTGGAGGATGGAAGGACTCTTGCTGATTACAACATCCAGAA
GGAGTCCACTCTGCATCTTGTGCTCCGTCCTCCCGTGGGAGGTT