CF417165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGS2_VICFA (Glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic OS=Vicia faba GN=AGPP PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 7.067e-90 Identity = 138/156 (88.46%), Postives = 146/156 (93.59%), Query Frame = 2 Query: 116 LAFSSSQLSGDKIFSKAVTGDRRSERRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 L+F+SS LSGDKIF+ + R S R P +VSP+AVSDSKNSQTCLDP+ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASN+GGYKNEGFVEVLAAQQSPENPNWFQGTADA Sbjct: 29 LSFTSSHLSGDKIFTLSGRTRRTSGRNPFIVSPKAVSDSKNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNLGGYKNEGFVEVLAAQQSPENPNWFQGTADA 184 HSP 2 Score: 75.8702 bits (185), Expect = 7.067e-90 Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQA 689 VRQYLWLFEEHNVLE+LVLAGDHLYRMDYERFIQA Sbjct: 185 VRQYLWLFEEHNVLEYLVLAGDHLYRMDYERFIQA 219
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGS_BETVU (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic (Fragment) OS=Beta vulgaris GN=AGPB1 PE=2 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.569e-89 Identity = 143/159 (89.94%), Postives = 146/159 (91.82%), Query Frame = 2 Query: 116 LAFSSSQLSGDKIFSKAVTGDRR---SERRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 LAFSSS LSGDKI + + R S R PIVVSP+AVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA Sbjct: 15 LAFSSSSLSGDKIQTTSFLNRRYCRISSRAPIVVSPKAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 173 HSP 2 Score: 75.0998 bits (183), Expect = 1.569e-89 Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQA 689 VRQYLWLFEEHNVLE+L+LAGDHLYRMDYERF+QA Sbjct: 174 VRQYLWLFEEHNVLEYLILAGDHLYRMDYERFVQA 208
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGS_BRANA (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Brassica napus GN=AGPS1 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.052e-86 Identity = 145/199 (72.86%), Postives = 155/199 (77.89%), Query Frame = 2 Query: 8 MASMASIGSLXXXXXXXXXXXXXXXXXXXXXXXXXXLAFSSSQLSGDK-------IFSKAVTGDRRSERRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 MA+MA+IGSL L+FSSS L+G+K I S G+ R R P +VSP+AVSDS+NSQTCLDP+ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA Sbjct: 1 MATMAAIGSLKVPSSSSNHTRRLSSSSQRKT-----LSFSSSSLTGEKLNPTQEIIISNLPRGNER--RTPSIVSPKAVSDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 192 HSP 2 Score: 75.8702 bits (185), Expect = 2.052e-86 Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQA 689 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYE+FIQA Sbjct: 193 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYEKFIQA 227
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGS_SOLTU (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 265.003 bits (676), Expect = 2.927e-85 Identity = 137/160 (85.62%), Postives = 147/160 (91.88%), Query Frame = 2 Query: 116 LAFSSSQLSGDKIF---SKAVTGDRRSERR-PIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 L+FSSS L+GDK+ S G R + RR P++VSP+AVSDS+NSQTCLDP+ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENP+WFQGTADA Sbjct: 34 LSFSSSHLAGDKLMPVSSLRSQGVRFNVRRSPMIVSPKAVSDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPDWFQGTADA 193 HSP 2 Score: 72.0182 bits (175), Expect = 2.927e-85 Identity = 31/35 (88.57%), Postives = 34/35 (97.14%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQA 689 VRQYLWLFEEH VLE+L+LAGDHLYRMDYE+FIQA Sbjct: 194 VRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQA 228
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGS_SOLLC (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 3.819e-85 Identity = 136/160 (85.00%), Postives = 146/160 (91.25%), Query Frame = 2 Query: 116 LAFSSSQLSGDKIF---SKAVTGDRRSERR-PIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 L+FSSS L+GDK+ S G R + RR P++VSP+AVSDS+NSQTCLDP+ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMG YKNEGFVEVLAAQQSPENP+WFQGTADA Sbjct: 34 LSFSSSHLAGDKLMPVSSLRSQGVRFNVRRSPLIVSPKAVSDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGEYKNEGFVEVLAAQQSPENPDWFQGTADA 193 HSP 2 Score: 74.3294 bits (181), Expect = 3.819e-85 Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQA 689 VRQYLWLFEEHNVLE+L+LAGDHLYRMDYE+FIQA Sbjct: 194 VRQYLWLFEEHNVLEYLILAGDHLYRMDYEKFIQA 228
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGS_ARATH (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Arabidopsis thaliana GN=APS1 PE=2 SV=2) HSP 1 Score: 260.766 bits (665), Expect = 1.106e-84 Identity = 135/160 (84.38%), Postives = 141/160 (88.12%), Query Frame = 2 Query: 116 LAFSSSQLSGDKIFSKAVTGDRRSE----RRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 L+FSSS S D S T R + R PI+VSP+AVSDS+NSQTCLDP+AS SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA Sbjct: 33 LSFSSSVTSSDDKISLKSTVSRLCKSVVRRNPIIVSPKAVSDSQNSQTCLDPDASSSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 192 HSP 2 Score: 74.3294 bits (181), Expect = 1.106e-84 Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQA 689 VRQYLWLFEEHNVLE+L+LAGDHLYRMDYE+FIQA Sbjct: 193 VRQYLWLFEEHNVLEYLILAGDHLYRMDYEKFIQA 227
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGS1_VICFA (Glucose-1-phosphate adenylyltransferase small subunit 1, chloroplastic OS=Vicia faba GN=AGPC PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 4.175e-84 Identity = 131/155 (84.52%), Postives = 142/155 (91.61%), Query Frame = 2 Query: 125 SSSQLSGDKIFSKAVTGDRRSE--RRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 SSSQLSG+KI + + G R + + ++P+AVSDS+NSQTCLDP+ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASN+GGYKNEGFVEVLAAQQSPENPNWFQGTADA Sbjct: 26 SSSQLSGNKILTVSGNGAPRGRCTLKHVFLTPKAVSDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNLGGYKNEGFVEVLAAQQSPENPNWFQGTADA 180 HSP 2 Score: 74.3294 bits (181), Expect = 4.175e-84 Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQA 689 VRQYLWLFEEHNVLE+L+LAGDHLYRMDYE+FIQA Sbjct: 181 VRQYLWLFEEHNVLEYLILAGDHLYRMDYEKFIQA 215
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGS_ORYSJ (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=AGPS PE=2 SV=4) HSP 1 Score: 248.825 bits (634), Expect = 3.204e-81 Identity = 121/131 (92.37%), Postives = 128/131 (97.71%), Query Frame = 2 Query: 191 RRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 RRP+V SP+AVSDSK+SQTCLDP+AS SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY +N+GGYKNEGFVEVLAAQQSP+NPNWFQGTADA Sbjct: 56 RRPLVFSPRAVSDSKSSQTCLDPDASTSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYGNNIGGYKNEGFVEVLAAQQSPDNPNWFQGTADA 186 HSP 2 Score: 74.7146 bits (182), Expect = 3.204e-81 Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQA 689 VRQYLWLFEEHNV+EFL+LAGDHLYRMDYE+FIQA Sbjct: 187 VRQYLWLFEEHNVMEFLILAGDHLYRMDYEKFIQA 221
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGS_HORVU (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 7.770e-80 Identity = 120/131 (91.60%), Postives = 126/131 (96.18%), Query Frame = 2 Query: 191 RRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 RRP SP+AVSDSK+SQTCLDP+AS SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY SN+GGYKNEGFVEVLAAQQSP+NP+WFQGTADA Sbjct: 55 RRPFFFSPRAVSDSKSSQTCLDPDASTSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYGSNIGGYKNEGFVEVLAAQQSPDNPDWFQGTADA 185 HSP 2 Score: 73.559 bits (179), Expect = 7.770e-80 Identity = 31/35 (88.57%), Postives = 35/35 (100.00%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQA 689 VRQYLWLFEEHNV+E+L+LAGDHLYRMDYE+FIQA Sbjct: 186 VRQYLWLFEEHNVMEYLILAGDHLYRMDYEKFIQA 220
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGS_WHEAT (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Triticum aestivum GN=AGP-S PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 1.565e-68 Identity = 102/118 (86.44%), Postives = 107/118 (90.68%), Query Frame = 2 Query: 230 SKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 S + L+P SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYV TQFNSASLNRHLSRAY SN+GGYKNEGFVEVLAAQQSP+NP+WFQGTADA Sbjct: 28 SSSKHADLNPHVDDSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVRTQFNSASLNRHLSRAYGSNIGGYKNEGFVEVLAAQQSPDNPDWFQGTADA 145 HSP 2 Score: 73.559 bits (179), Expect = 1.565e-68 Identity = 31/35 (88.57%), Postives = 35/35 (100.00%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQA 689 VRQYLWLFEEHNV+E+L+LAGDHLYRMDYE+FIQA Sbjct: 146 VRQYLWLFEEHNVMEYLILAGDHLYRMDYEKFIQA 180 The following BLAST results are available for this feature:
BLAST of CF417165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417165 ID=CF417165; Name=CF417165; organism=Citrus sinensis; type=EST; length=690bpback to top |