CF417166

Overview
NameCF417166
Unique NameCF417166
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1884 contig Csv1_Contig1884:294..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417166 vs. ExPASy Swiss-Prot
Match: MLO1_ARATH (MLO-like protein 1 OS=Arabidopsis thaliana GN=MLO1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.994e-30
Identity = 64/82 (78.05%), Postives = 72/82 (87.80%), Query Frame = 3
Query:    3 CIMGQVCYIVPRLIIGVFIQVLCSYSTLPLYAIVTQMGSSFKKAIFEENVQVGIVGWAEKVRRKKDPKAAKDGSTQSSSHQG 248
            CIMGQV YIVPRL+IGVFIQVLCSYSTLPLYAIV+QMGSSFKKAIFEENVQVG+VGWA+KV++K+D KAA     + SS  G
Sbjct:  400 CIMGQVRYIVPRLVIGVFIQVLCSYSTLPLYAIVSQMGSSFKKAIFEENVQVGLVGWAQKVKQKRDLKAAASNGDEGSSQAG 481          
BLAST of CF417166 vs. ExPASy Swiss-Prot
Match: MLO15_ARATH (MLO-like protein 15 OS=Arabidopsis thaliana GN=MLO15 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.168e-20
Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 3
Query:    3 CIMGQVCYIVPRLIIGVFIQVLCSYSTLPLYAIVTQMGSSFKKAIFEENVQVGIVGWAEKVRRKKDPKAAKDGSTQ--SSSHQGVQLGRAFRKSSTPEEIQP 302
            CIM  V +++PRL+IGV IQ+LCSYSTLPLYA+VTQMGSSFK AIF E  Q  +VGWA+  +R     A + G++   +S    +QL     K S+ +   P
Sbjct:  385 CIMDHVKFVIPRLVIGVIIQLLCSYSTLPLYALVTQMGSSFKGAIFNEQTQEHLVGWAKMAKRGVKKGATQVGTSHDATSPRPSIQLNSLLGKGSSQQNQNP 486          
BLAST of CF417166 vs. ExPASy Swiss-Prot
Match: MLO13_ARATH (MLO-like protein 13 OS=Arabidopsis thaliana GN=MLO13 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.303e-17
Identity = 42/81 (51.85%), Postives = 56/81 (69.14%), Query Frame = 3
Query:    3 CIMGQVCYIVPRLIIGVFIQVLCSYSTLPLYAIVTQMGSSFKKAIFEENVQVGIVGWAEKVRRKKDPKAAKDGSTQSSSHQ 245
            CIM ++ Y++PRL++GV +QVLCSYSTLPLYA+VTQMGS FKK IF+  VQ  + GW E  R +        G + S +H+
Sbjct:  388 CIMEKLGYLIPRLVMGVLVQVLCSYSTLPLYALVTQMGSKFKKGIFDNVVQSTLEGWLEDTRNR--------GESTSEAHR 460          
BLAST of CF417166 vs. ExPASy Swiss-Prot
Match: MLOH1_ORYSJ (MLO protein homolog 1 OS=Oryza sativa subsp. japonica GN=MLO1 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.588e-11
Identity = 31/70 (44.29%), Postives = 43/70 (61.43%), Query Frame = 3
Query:    3 CIMGQVCYIVPRLIIGVFIQVLCSYSTLPLYAIVTQMGSSFKKAIFEENVQVGIVGWAEKVRRKKDPKAA 212
            C    +   +  +I+G+ +QVLCSY T PLYA+VTQMGS+ KK IFEE     ++ W +K   KK  + A
Sbjct:  379 CFHENIWLSIVEVIVGISLQVLCSYITFPLYALVTQMGSNMKKTIFEEQTMKALMNWRKKAMEKKKVRDA 448          
BLAST of CF417166 vs. ExPASy Swiss-Prot
Match: MLOH1_ORYSI (MLO protein homolog 1 OS=Oryza sativa subsp. indica GN=MLO1 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.588e-11
Identity = 31/70 (44.29%), Postives = 43/70 (61.43%), Query Frame = 3
Query:    3 CIMGQVCYIVPRLIIGVFIQVLCSYSTLPLYAIVTQMGSSFKKAIFEENVQVGIVGWAEKVRRKKDPKAA 212
            C    +   +  +I+G+ +QVLCSY T PLYA+VTQMGS+ KK IFEE     ++ W +K   KK  + A
Sbjct:  379 CFHENIWLSIVEVIVGISLQVLCSYITFPLYALVTQMGSNMKKTIFEEQTMKALMNWRKKAMEKKKVRDA 448          
BLAST of CF417166 vs. ExPASy Swiss-Prot
Match: MLO3_ARATH (MLO-like protein 3 OS=Arabidopsis thaliana GN=MLO3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.879e-11
Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 3
Query:   27 IVPRLIIGVFIQVLCSYSTLPLYAIVTQMGSSFKKAIFEENVQVGIVGWAEKVRRKKDPKAAKDGSTQSSSHQG 248
            I+ RL++ V +Q L SY TLPLYAIVTQMGSS+K+AI EE +   +  W   VR KK      D    S+++ G
Sbjct:  397 IITRLVLAVTVQFLSSYITLPLYAIVTQMGSSYKRAILEEQLANVLRHWQGMVRDKKKTIQTPDTDNNSNNNNG 470          
BLAST of CF417166 vs. ExPASy Swiss-Prot
Match: MLO14_ARATH (MLO-like protein 14 OS=Arabidopsis thaliana GN=MLO14 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.879e-11
Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 3
Query:    3 CIMGQVCYIVPRLIIGVFIQVLCSYSTLPLYAIVTQMGSSFKKAIFEENVQVGIVGWAEKVRRKKDPKAAKDGST 227
            C +     +  RLI+G   Q LCSYSTLPLYA+VTQMG+++K A+  + V+  I GW +  RRK+      D ST
Sbjct:  394 CFLRNHLLVYLRLILGFSGQFLCSYSTLPLYALVTQMGTNYKAALLPQRVRETINGWGKATRRKRRHGLYGDDST 468          
The following BLAST results are available for this feature:
BLAST of CF417166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MLO1_ARATH1.994e-3078.05MLO-like protein 1 OS=Arabidopsis thaliana GN=MLO1... [more]
MLO15_ARATH4.168e-2049.02MLO-like protein 15 OS=Arabidopsis thaliana GN=MLO... [more]
MLO13_ARATH3.303e-1751.85MLO-like protein 13 OS=Arabidopsis thaliana GN=MLO... [more]
MLOH1_ORYSJ1.588e-1144.29MLO protein homolog 1 OS=Oryza sativa subsp. japon... [more]
MLOH1_ORYSI1.588e-1144.29MLO protein homolog 1 OS=Oryza sativa subsp. indic... [more]
MLO3_ARATH7.879e-1147.30MLO-like protein 3 OS=Arabidopsis thaliana GN=MLO3... [more]
MLO14_ARATH7.879e-1145.33MLO-like protein 14 OS=Arabidopsis thaliana GN=MLO... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-096 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_B9 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417166 ID=CF417166; Name=CF417166; organism=Citrus sinensis; type=EST; length=590bp
CCTGTATCATGGGACAAGTTTGTTATATTGTACCAAGGCTCATCATTGGG
GTGTTTATTCAAGTTCTCTGTAGCTACAGCACCCTTCCACTTTATGCCAT
TGTCACGCAGATGGGAAGCTCCTTCAAGAAGGCGATATTTGAAGAGAATG
TGCAAGTAGGCATTGTTGGTTGGGCCGAAAAGGTGAGGAGAAAGAAAGAT
CCAAAAGCAGCTAAAGATGGGTCTACCCAATCAAGTTCCCACCAAGGAGT
TCAGCTGGGAAGAGCTTTCCGCAAGTCATCTACTCCGGAGGAAATTCAGC
CTTCCACACATGGGATCCGAGGGTTCCAAATGAGCTGCTGTACCAACCCG
ACGAAAGCAGCAGGCTTAAGGCTTCTGGAAATTTTAGTTTTGTAGAAGTA
TATAAACTGGTTGGTTATAGCCACAGTTATACGTATATTGATGTAGGGCA
TATTTTAAACCCAAGAGAGCACGCAACTTAGGAATATCTTTTGGAGTTTG
TAACTGACATTGTAGTTGAGCAGGCGCGCTACCTGCTGTTGATGGATATA
TATTTCAAAAGGAAAATACTTGGGTTTTATATCACCATTT
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