CF417204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417204 vs. ExPASy Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.693e-42 Identity = 77/145 (53.10%), Postives = 98/145 (67.59%), Query Frame = 2 Query: 113 PEVDATRWIVGANQGWTNNVNYTIWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCYGGRKLAVRVENXXXXXXXXXIKEKSGTPSTLYRGQLVLP-AVFAIGAVWD 544 P V A ++ VG N+ W N+NYTIWA+ KHFY GDWL+FV+DRNQ N+LEVNKTDYE C +DHP+ NWT GAGRD+V LN T+HYY + GKG CYGG KL+V+VE +K Q ++P ++FA A+WD Sbjct: 22 PGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVEKLPPPPKSAPVKNIGSVSMVTGLAQFMIPVSLFAFPAMWD 166
BLAST of CF417204 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.063e-12 Identity = 40/104 (38.46%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 125 ATRWIVGANQGWTNNV--NYTIWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISG-KGFCYGGRKLAVRVE 427 AT VG + GWT V +Y WA F+ GD L F Y+ NVL+V++ ++SCNS P ++T+GA D +PL +YF+ G G C G+K+ ++V+ Sbjct: 1 ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGA--DSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 102
BLAST of CF417204 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.546e-11 Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 2 Query: 125 ATRWIVGANQGWTNNVNYTIWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISG-KGFCYGGRKLAVRVE 427 AT + VG GW +Y+ WA DK F GD L F Y V EV ++DY+SC S + + +TGA +PL +YFI G G GG KL+++V+ Sbjct: 24 ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSISTDSTGA--TTIPLKKAGKHYFICGVPGHSTGGMKLSIKVK 123 The following BLAST results are available for this feature:
BLAST of CF417204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417204 ID=CF417204; Name=CF417204; organism=Citrus sinensis; type=EST; length=669bpback to top |