CF417212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.075e-36 Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 3 Query: 126 GLKAGATPARVV--GSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 GLKAGA+ + V G++ K +A+ V +L++KA+LKDVG +EVLLGGDDG LA +P +FSV +GEKI N AGFPH+ FD DEIP+G Sbjct: 16 GLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATAVSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAG 120 HSP 2 Score: 77.0258 bits (188), Expect = 6.075e-36 Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 2 Query: 452 IXVSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 I +S EDLLN GETY+VTL+EKGTY+FYC PHQGAGMVG VTVN Sbjct: 126 ISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 6.564e-35 Identity = 53/103 (51.46%), Postives = 63/103 (61.17%), Query Frame = 3 Query: 126 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 GLKAG+ V ++ K SAS +P+LSIKA++KDVG I+VLLG DDG LA VPS FS+ GEKIV N AGFPH+ FD D IPSG Sbjct: 16 GLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAASAMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSG 118 HSP 2 Score: 69.707 bits (169), Expect = 6.564e-35 Identity = 32/45 (71.11%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 452 IXVSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 I +S EDLLN GET+ V L+ KG YSFYC PHQGAGMVG VTVN Sbjct: 124 ISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 6.564e-35 Identity = 51/107 (47.66%), Postives = 64/107 (59.81%), Query Frame = 3 Query: 126 GLKAGA----TPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 GLKA T A+++ +T +AVP+LS+KA+LK+VG +EVLLGG DG LA +P FSV SGE+IV N AGFPH+ FD DEIPSG Sbjct: 17 GLKASGSIKPTTAKIIPTT-----TAVPRLSVKASLKNVGAAVVATAAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSG 118 HSP 2 Score: 80.4925 bits (197), Expect = 6.564e-35 Identity = 37/45 (82.22%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 452 IXVSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 I +S EDLLN PGETY VTLTEKGTY FYC PHQGAGMVG VTVN Sbjct: 124 ISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 3.458e-33 Identity = 51/103 (49.51%), Postives = 63/103 (61.17%), Query Frame = 3 Query: 126 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 GLKA + V ++ K SAS +P+LSIKA+LK+VG ++VLLG DDG LA VPS FSV +GEKIV N AGFPH+ FD D +PSG Sbjct: 16 GLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAASAMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSG 118 HSP 2 Score: 67.0106 bits (162), Expect = 3.458e-33 Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 452 IXVSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 I +S EDLLN GET+ V L++KG Y+FYC PHQGAGMVG V VN Sbjct: 124 ISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_SILPR (Plastocyanin, chloroplastic OS=Silene pratensis GN=PETE PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.073e-31 Identity = 49/103 (47.57%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 126 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 GLKA +T +T+K A A P++SIKA+LKDVG EVLLG DG LA VPS S+ SGEKI N AGFPH+ FD DE+P+G Sbjct: 17 GLKASSTTR---AATVKV-AVATPRMSIKASLKDVGVVVAATAAAGILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAG 115 HSP 2 Score: 74.7146 bits (182), Expect = 1.073e-31 Identity = 34/45 (75.56%), Postives = 36/45 (80.00%), Query Frame = 2 Query: 452 IXVSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 I + EDLLN PGE Y+VTLTEKGTY FYC PH GAGMVG VTVN Sbjct: 121 ISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.085e-31 Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 126 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 GLKA + ++ +A A PKL++K++LK+ G IEVLLGG DG LA +P+ FS+ GEKIV N AG+PH+ FD DEIPSG Sbjct: 16 GLKASTIKSSAT-VRIQTAAVASPKLTVKSSLKNFGVAAVAAAASIALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSG 117 HSP 2 Score: 74.3294 bits (181), Expect = 3.085e-31 Identity = 34/45 (75.56%), Postives = 36/45 (80.00%), Query Frame = 2 Query: 452 IXVSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 I + +DLLNG GETY V LTE GTYSFYC PHQGAGMVG VTVN Sbjct: 123 ISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana GN=PETE PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 9.545e-30 Identity = 50/106 (47.17%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 126 GLKAGATPARVVGSTMKASASAV---PKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 GLK + ST+ S SA PKL++K++LKD G +EVLLG DDG LA VPS F+V GEKIV N AGFPH+ FD DEIPSG Sbjct: 16 GLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPSG 121 HSP 2 Score: 65.4698 bits (158), Expect = 9.545e-30 Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 473 LLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTV 583 LLNG GETY VTLTE G+Y FYC PHQGAGMVG +TV Sbjct: 134 LLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum GN=PETE PE=4 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.244e-29 Identity = 44/103 (42.72%), Postives = 54/103 (52.43%), Query Frame = 3 Query: 126 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 GLK A + + S S P+L ++A+LKD G +EVLLG DG LA VPSS V +GE IV N AGFPH+ FD DEIP+G Sbjct: 16 GLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAASAVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAG 118 HSP 2 Score: 72.4034 bits (176), Expect = 1.244e-29 Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 452 IXVSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 I + EDLLN PGETY+V L KGTY FYC PHQGAGMVG VTVN Sbjct: 124 ISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 168
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS2_TOBAC (Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.284e-29 Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 2 Query: 452 IXVSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 I +S EDLLNGPGETY+VTL+EKGTY+FYC PHQGAGMVG VTVN Sbjct: 55 ISMSEEDLLNGPGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99 HSP 2 Score: 68.5514 bits (166), Expect = 1.284e-29 Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 3 Query: 288 IEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 IEVLLG DDG LA VP +FSV +GEKI N AGFPH+ FD DEIP+G Sbjct: 1 IEVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAG 49
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_RUMOB (Plastocyanin OS=Rumex obtusifolius GN=PETE PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.672e-29 Identity = 37/44 (84.09%), Postives = 39/44 (88.64%), Query Frame = 2 Query: 452 IXVSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTV 583 I +S EDLLN PGETYAVTL+EKGTYSFYC PHQGAGMVG VTV Sbjct: 55 ISMSEEDLLNAPGETYAVTLSEKGTYSFYCSPHQGAGMVGKVTV 98 HSP 2 Score: 70.4774 bits (171), Expect = 1.672e-29 Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 288 IEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 IE+ LGGDDG LA VP SF+V +GEKIV N AGFPH+ FD DE+P+G Sbjct: 1 IEIKLGGDDGALAFVPGSFTVAAGEKIVFKNNAGFPHNIVFDEDEVPAG 49 The following BLAST results are available for this feature:
BLAST of CF417212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417212 ID=CF417212; Name=CF417212; organism=Citrus sinensis; type=EST; length=684bpback to top |