CF417223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417223 vs. ExPASy Swiss-Prot
Match: HIBCH_DANRE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio GN=hibch PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.242e-23 Identity = 58/136 (42.65%), Postives = 85/136 (62.50%), Query Frame = 3 Query: 93 VLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLXVVYRM-YWLCHHIHTYKKTQVALAHGITMGGGASLMVPLKFSVVTEKTVFSTPEASIG 494 VL E++G ++TLNRP+ LN ++ ++ + L+KW+KD +VI+KG G +AF AGGD++ + + + V +R Y L + I TY+K VAL +GITMGGG L V +F V TEKT+F+ PE IG Sbjct: 34 VLFEKVGKAGVITLNRPKALNALTLNMIRHIYPQLKKWDKDSETDIVIIKGAGEKAFCAGGDIRAIAEAGKAGNLLSQVFFREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQFRVATEKTLFAMPETGIG 169
BLAST of CF417223 vs. ExPASy Swiss-Prot
Match: HIBCH_BOVIN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus GN=HIBCH PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.242e-23 Identity = 61/162 (37.65%), Postives = 98/162 (60.49%), Query Frame = 3 Query: 15 FLSFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLXVVYRM-YWLCHHIHTYKKTQVALAHGITMGGGASLMVPLKFSVVTEKTVFSTPEASIG 494 F S++ N+++ + + +V+L E G ++TLNRPR LN ++ ++ + L+KWE+D + L+I+KG G +AF AGGD++ + RN+ L ++R Y L + I + +K +AL HGITMGGG + V +F V TEK+VF+ PE +IG Sbjct: 13 FNSYKRTNIILQHLKMSNHTDAAAEVLL-ERKGCAGVITLNRPRFLNTLTLGMIRQIYAQLKKWEQDPKTFLIIIKGAGEKAFCAGGDIRALSEARNTNQKMLQDLFREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVATEKSVFAMPETAIG 173
BLAST of CF417223 vs. ExPASy Swiss-Prot
Match: HIBCH_HUMAN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 60/162 (37.04%), Postives = 96/162 (59.26%), Query Frame = 3 Query: 15 FLSFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLXVVYRM-YWLCHHIHTYKKTQVALAHGITMGGGASLMVPLKFSVVTEKTVFSTPEASIG 494 F +F+ N ++ + + E+V+L E+ G ++TLNRP+ LN ++ ++ + L+KWE+D L+I+KG G +AF AGGD+++ + +K V +R Y L + + + +K VAL HGITMGGG L V +F V TEK +F+ PE +IG Sbjct: 13 FNAFKRTNTILHHLRMSKHTDAAEEVLL-EKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIG 173
BLAST of CF417223 vs. ExPASy Swiss-Prot
Match: HIBCH_CHICK (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.366e-21 Identity = 59/136 (43.38%), Postives = 82/136 (60.29%), Query Frame = 3 Query: 93 VLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLXVVYRM-YWLCHHIHTYKKTQVALAHGITMGGGASLMVPLKFSVVTEKTVFSTPEASIG 494 VL ++ G ++TLNRP+ LN +S K++ + ++ WE+D L+I+KG G +AF AGGD++ D + D+ +R Y L + I T KK VAL GITMGGG L V F V TEKTVF+ PE +IG Sbjct: 37 VLLQKQGGAGIITLNRPKVLNALSFKMIQQIYPQIKAWEQDPETFLIIIKGTGEKAFCAGGDVRAIADAGKAGDTMTRDYFREEYRLDNAIGTCKKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIG 172 HSP 2 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 1 Query: 445 QLSRKKLFFPLQKQVLGFILXCGFSFIHSRLPGHLGEFLALTGARLNGKELVAAGLATHFVPSEKLPELEKRLIGLNT 678 +++ +K F + + +G G + RL G +G LALTG RL G++++ AG+ATHFV S KLPELEK LI L + Sbjct: 156 RVATEKTVFAMPETAIGLFPDVGGGYFLPRLSGKIGHLLALTGFRLKGRDVLKAGIATHFVESGKLPELEKDLIALKS 233
BLAST of CF417223 vs. ExPASy Swiss-Prot
Match: HIBCH_SCHPO (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Schizosaccharomyces pombe GN=ehd3 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.576e-20 Identity = 61/173 (35.26%), Postives = 95/173 (54.91%), Query Frame = 3 Query: 15 FLSFESANLLID*MAQGVVKNP------DEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVGRAFSAGGDLKM----FYDGRNSKDSCLXVVYRMYWLCHHIHTYKKTQVALAHGITMGGGASLMVPLKFSVVTEKTVFSTPEASIGFHT 503 FLS +++ M++ ++NP VL E R+ TLNRP+ LN I+ ++ + L E+ + AK++I+KG GR+FS+GGD+K DG+ + + Y L H + TY+K VAL +GITMGGG+ L + + F + E T+F+ PE IG+ T Sbjct: 30 FLSLNASST----MSRAFIRNPKFYSTSSNDTVLYESKNGARIFTLNRPKVLNAINVDMIDSILPKLVSLEESNLAKVIILKGNGRSFSSGGDIKAAALSIQDGKLPE--VRHAFAQEYRLSHTLATYQKPVVALMNGITMGGGSGLAMHVPFRIACEDTMFAMPETGIGYFT 196
BLAST of CF417223 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20 Identity = 57/130 (43.85%), Postives = 77/130 (59.23%), Query Frame = 3 Query: 111 GNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLXVVYRM-YWLCHHIHTYKKTQVALAHGITMGGGASLMVPLKFSVVTEKTVFSTPEASIG 494 G ++TLNRP+ LN ++ ++ L+ L WE+D LVI+KGVG +AF AGGD++ D + D +R Y L + I TYKK VAL GITMGGG L V F V +E T+F+ PE +IG Sbjct: 43 GCAGVITLNRPKALNALNLGMIRLIYPQLGLWEEDPETYLVIIKGVGGKAFCAGGDIRAVTDAGKAGDRLAQDFFREEYILNNAIGTYKKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIG 172
BLAST of CF417223 vs. ExPASy Swiss-Prot
Match: HIBCH_RAT (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20 Identity = 59/162 (36.42%), Postives = 93/162 (57.41%), Query Frame = 3 Query: 15 FLSFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGV-GRAFSAGGDLKMFYDGRNSKDSCLXVVYR-MYWLCHHIHTYKKTQVALAHGITMGGGASLMVPLKFSVVTEKTVFSTPEASIG 494 F S A++++ + K+ + VL E G ++TLNRP+ LN +S ++ + L+KWE+D L+I+KG G+AF AGGD+K + + + + ++R Y L + I + +K VAL GITMGGG L V +F V TE+++F+ PE IG Sbjct: 13 FSSIRRASVILQHLRMS--KHTETAEVLLERRGCAGVITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAGQTLSQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIG 172
BLAST of CF417223 vs. ExPASy Swiss-Prot
Match: HIBCH_MOUSE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.345e-19 Identity = 58/160 (36.25%), Postives = 92/160 (57.50%), Query Frame = 3 Query: 21 SFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLXVVYRM-YWLCHHIHTYKKTQVALAHGITMGGGASLMVPLKFSVVTEKTVFSTPEASIG 494 SF A++++ + + E VL E G ++TLNRP+ LN +S ++ + L+ WE+D L+I+KG G +AF AGGD+K + + ++ + ++R Y L + I + +K VAL GITMGGG L V +F V TE+++F+ PE IG Sbjct: 15 SFRRASVILQHLRMSMHTEAAE--VLLERRGCGGVITLNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKARQNLTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIG 172
BLAST of CF417223 vs. ExPASy Swiss-Prot
Match: HIBCH_YEAST (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Saccharomyces cerevisiae GN=EHD3 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.042e-18 Identity = 46/130 (35.38%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 120 RLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVGR--AFSAGGDLKMFYDGRNSKDSCLXVVYRM--YWLCHHIHTYKKTQVALAHGITMGGGASLMVPLKFSVVTEKTVFSTPEASIGF 497 R++TLNRP++LN +++++ + + L ++ K D LVI+K R +F AGGD+ +K+ + + Y L I TY K V GITMGGG L + F + TE T ++ PE IGF Sbjct: 48 RVITLNRPKKLNALNAEMSESMFKTLNEYAKSDTTNLVILKSSNRPRSFCAGGDVATVAIFNFNKEFAKSIKFFTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFRIATENTKWAMPEMDIGF 177 HSP 2 Score: 36.965 bits (84), Expect = 1.042e-18 Identity = 22/64 (34.38%), Postives = 32/64 (50.00%), Query Frame = 1 Query: 490 LGFILXCGFSFIHSRLP------GHLGEFLALTGARLNGKELVAAGLATHFVPSEKLPELEKRL 663 +GF G +F R+ + +L LTG + G + GLA+H+V SE L L+KRL Sbjct: 175 IGFFPDVGSTFALPRIVTLANSNSQMALYLCLTGEVVTGADAYMLGLASHYVSSENLDALQKRL 238
BLAST of CF417223 vs. ExPASy Swiss-Prot
Match: HIBCH_XENLA (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 54/130 (41.54%), Postives = 75/130 (57.69%), Query Frame = 3 Query: 111 GNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLXVVYRM-YWLCHHIHTYKKTQVALAHGITMGGGASLMVPLKFSVVTEKTVFSTPEASIG 494 G ++TLNRP+ LN ++ ++ + L+ WE+D LVI+KG G +AF AGGD++ D D +R Y L + I T KK VA+ GITMGGG L V F V +EKT+F+ PE +IG Sbjct: 43 GCAGVITLNRPKALNALNLGMIRQIYPQLKLWEEDPETYLVIIKGAGGKAFCAGGDIRAVTDAGKVGDRLAQDFFREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAMPETAIG 172 The following BLAST results are available for this feature:
BLAST of CF417223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417223 ID=CF417223; Name=CF417223; organism=Citrus sinensis; type=EST; length=695bpback to top |