CF417226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417226 vs. ExPASy Swiss-Prot
Match: FLA17_ARATH (Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana GN=FLA17 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.233e-43 Identity = 72/167 (43.11%), Postives = 87/167 (52.10%), Query Frame = 1 Query: 202 LVPRSVQEDFNRRRNLRSISAVLPQGAAGGGPQDSPFKETGPLRVPAGAPPILPIYDXXXXXXXXXXXXXXXXXXXXXXFQRREGRVKGFHSHAVAIYGGYNEMADILVELDVVSDGNGXVWVSEGTVLDGAGPERTRRWRSLTTDQLERTGGRRNRLFITTFIPEY 702 L+PRSVQEDFNRRR+L+SISAVLP+GA P+ + K+ VPAG+PP LPI F E +VK F H + YGGYNEMADILV L ++ G + VSEG VL P LTTDQL G ++ IPEY Sbjct: 184 LIPRSVQEDFNRRRSLQSISAVLPEGAPEVDPRTNRLKKPA-APVPAGSPPALPIQSAMAPGPSLAPAPAPGPGGKQHHFD-GEAQVKDF-IHTLLHYGGYNEMADILVNLTSLATEMGRL-VSEGYVLTVLAP-NDEAMAKLTTDQLSEPGAPEQIVYY-HIIPEY 344 HSP 2 Score: 95.5153 bits (236), Expect = 3.233e-43 Identity = 42/69 (60.87%), Postives = 53/69 (76.81%), Query Frame = 3 Query: 3 FHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLFSP 209 FHI+P+R+GS WP E+SG KH+TL ND V LS+ K+++ AEI RPDD+TRPDG+IHGIERL P Sbjct: 118 FHIIPNRVGSNQWPSEESGRVKHHTLGNDQVRLSNGQGKKMVDLAEIIRPDDLTRPDGLIHGIERLLIP 186
BLAST of CF417226 vs. ExPASy Swiss-Prot
Match: FLA18_ARATH (Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana GN=FLA18 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.909e-41 Identity = 73/168 (43.45%), Postives = 90/168 (53.57%), Query Frame = 1 Query: 202 LVPRSVQEDFNRRRNLRSISAVLPQGAAGGGPQDSPFKETG-PLRVPAGAPPILPIYDXXXXXXXXXXXXXXXXXXXXXXFQRREGRVKGFHSHAVAIYGGYNEMADILVELDVVSDGNGXVWVSEGTVLDGAGPERTRRWRSLTTDQLERTGGRRNRLFITTFIPEY 702 L+PRSVQEDFNRRRNLRSISAVLP+GA P+ + K++ + VPAG+PP+LPI F + +VK F H + YGGYNEMADILV L ++ G + VSEG VL P LTTDQL G ++ IPEY Sbjct: 185 LIPRSVQEDFNRRRNLRSISAVLPEGAPEIDPRTNRLKKSATAVSVPAGSPPVLPIESAMAPGPSLAPAPAPGPGGAHKHF-NGDAQVKDF-IHTLLHYGGYNEMADILVNLTSLATEMGRL-VSEGYVLTVLAP-NDEAMGKLTTDQLSEPGAPEQIMYY-HIIPEY 347 HSP 2 Score: 84.3445 bits (207), Expect = 2.909e-41 Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 6 HILPSRIGSRNWPDEKSGSRKHNTLWNDFV-HLSS---KSSKRLIGSAEIFRPDDITRPDGVIHGIERLFSP 209 HI+P R+GS WP+E SG KH TL +D V HLS + KRL+ SA I RPDD+TRPDG+IHGIERL P Sbjct: 116 HIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTNGKRLVNSAVITRPDDLTRPDGLIHGIERLLIP 187
BLAST of CF417226 vs. ExPASy Swiss-Prot
Match: FLA16_ARATH (Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana GN=FLA16 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.438e-41 Identity = 75/167 (44.91%), Postives = 90/167 (53.89%), Query Frame = 1 Query: 202 LVPRSVQEDFNRRRNLRSISAVLPQGAAGGGPQDSPFKETGPLRVPAGAPPILPIYDXXXXXXXXXXXXXXXXXXXXXXFQRREGRVKGFHSHAVAIYGGYNEMADILVELDVVSDGNGXVWVSEGTVLDGAGPERTRRWRSLTTDQLERTGGRRNRLFITTFIPEY 702 L+PRSVQEDFNRRR+LRSISAV+P+GA P+ K+ P VPAGAPP+LPIYD F + +VK F H + YGGYNEMADILV L ++ G + VSEG VL P LTTDQL G ++ IPEY Sbjct: 173 LIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRLKKPSP-AVPAGAPPVLPIYDAMSPGPSLAPAPAPGPGGPRGHF-NGDAQVKDF-IHTLLHYGGYNEMADILVNLTSLATEMGRL-VSEGYVLTVLAP-NDEAMAKLTTDQLSEPGAPEQIMYY-HIIPEY 333 HSP 2 Score: 77.0258 bits (188), Expect = 6.438e-41 Identity = 39/69 (56.52%), Postives = 45/69 (65.22%), Query Frame = 3 Query: 3 FHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLFSP 209 FHILP RI S WP S S H TL ND +HL+ + + SAEI RPDD+ RPDG+IHGIERL P Sbjct: 110 FHILPKRITSPQWP---SLSHHHRTLSNDHLHLTVDVNTLKVDSAEIIRPDDVIRPDGIIHGIERLLIP 175
BLAST of CF417226 vs. ExPASy Swiss-Prot
Match: FLA15_ARATH (Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana GN=FLA15 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.062e-37 Identity = 74/167 (44.31%), Postives = 90/167 (53.89%), Query Frame = 1 Query: 202 LVPRSVQEDFNRRRNLRSISAVLPQGAAGGGPQDSPFKETGPLRVPAGAPPILPIYDXXXXXXXXXXXXXXXXXXXXXXFQRREGRVKGFHSHAVAIYGGYNEMADILVELDVVSDGNGXVWVSEGTVLDGAGPERTRRWRSLTTDQLERTGGRRNRLFITTFIPEY 702 L+PRSVQEDFNRRR+LRSI+AVLP+GA P+ K+ P +PAGAPP+LP+YD F E +VK F H + YGGYNEMADILV L ++ G + VSEG VL P LTTDQL G ++ IPEY Sbjct: 165 LIPRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRLKKK-PAPIPAGAPPVLPVYDAMSPGPSLAPAPAPGPGGPRHHF-NGEAQVKDF-IHTLLHYGGYNEMADILVNLTSLATEMGRL-VSEGYVLTVLAP-NDEAMAKLTTDQLSEPGAPEQIMYY-HIIPEY 325 HSP 2 Score: 67.0106 bits (162), Expect = 1.062e-37 Identity = 36/69 (52.17%), Postives = 43/69 (62.32%), Query Frame = 3 Query: 3 FHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLFSP 209 FHILP RI S P S H TL ND +H ++ + SAEI +PDD+TRPDG+IHGIERL P Sbjct: 106 FHILPKRITS---PQFSSAVVSHRTLSNDHLHFTNGK----VNSAEITKPDDLTRPDGIIHGIERLLIP 167 The following BLAST results are available for this feature:
BLAST of CF417226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417226 ID=CF417226; Name=CF417226; organism=Citrus sinensis; type=EST; length=709bpback to top |