CF417228
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417228 vs. ExPASy Swiss-Prot
Match: TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.246e-17 Identity = 39/113 (34.51%), Postives = 60/113 (53.10%), Query Frame = 2 Query: 20 IKELFNAYAICSTMVDQXXXXXXXXXXXXXNDSRDKLKGFDKFLHETSQ-SQNAASDLDKYLEEPIFPRNCEFNILNWWKVHTPRYPILSMMARDVLGTPMSTVVPESPFSTG 355 I++L+ Y+ CS + ++ D F +LHE Q +++LDKY+ EP+ + +F+IL+WW+ YPIL+ +ARDVL +STV ES FS G Sbjct: 584 IRKLYQFYSSCSPSAPKTKTTTNDSMDDTLMENEDD--EFQNYLHELKDYDQVESNELDKYMSEPLLKHSGQFDILSWWRGRVAEYPILTQIARDVLAIQVSTVASESAFSAG 694 HSP 2 Score: 33.113 bits (74), Expect = 4.246e-17 Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 3 Query: 354 GGRLLDSCQSSLNPDTRQALICARDWVA 437 GGR++D ++ L + +ALIC +DWVA Sbjct: 694 GGRVVDPYRNRLGSEIVEALICTKDWVA 721
BLAST of CF417228 vs. ExPASy Swiss-Prot
Match: TRA1_MAIZE (Putative AC transposase OS=Zea mays PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 4.249e-17 Identity = 39/113 (34.51%), Postives = 60/113 (53.10%), Query Frame = 2 Query: 20 IKELFNAYAICSTMVDQXXXXXXXXXXXXXNDSRDKLKGFDKFLHETSQ-SQNAASDLDKYLEEPIFPRNCEFNILNWWKVHTPRYPILSMMARDVLGTPMSTVVPESPFSTG 355 I++L+ Y+ CS + ++ D F +LHE Q +++LDKY+ EP+ + +F+IL+WW+ YPIL+ +ARDVL +STV ES FS G Sbjct: 615 IRKLYQFYSSCSPSAPKTKTTTNDSMDDTLMENEDD--EFQNYLHELKDYDQVESNELDKYMSEPLLKHSGQFDILSWWRGRVAEYPILTQIARDVLAIQVSTVASESAFSAG 725 HSP 2 Score: 33.113 bits (74), Expect = 4.249e-17 Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 3 Query: 354 GGRLLDSCQSSLNPDTRQALICARDWVA 437 GGR++D ++ L + +ALIC +DWVA Sbjct: 725 GGRVVDPYRNRLGSEIVEALICTKDWVA 752 The following BLAST results are available for this feature:
BLAST of CF417228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417228 ID=CF417228; Name=CF417228; organism=Citrus sinensis; type=EST; length=727bpback to top |