CF417235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417235 vs. ExPASy Swiss-Prot
Match: RNZN_ARATH (Nuclear ribonuclease Z OS=Arabidopsis thaliana GN=NUZ PE=2 SV=3) HSP 1 Score: 191.43 bits (485), Expect = 2.048e-49 Identity = 87/118 (73.73%), Postives = 103/118 (87.29%), Query Frame = 1 Query: 283 RGMQLQGYKVEGLSIAGHETCIIFPSLDLAFDIGRCPSRALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEIHRRMDHSELNHTLVGLDVGGKVLHEK 636 + MQ++GY +EGLSI GHETCIIFPSL +AFDIGRCP RA+SQ+FLFISH+HMDHIGGLPMYVATRGLY+MKPPTIIVP+ IKE VE LFE+HR++D SEL H LVGLD+G + + K Sbjct: 5 KAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHIGGLPMYVATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFIIRK 122 HSP 2 Score: 25.409 bits (54), Expect = 2.048e-49 Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 614 GEKFCMRKDLFVKAF 658 GE+F +RKDL VKAF Sbjct: 115 GEEFIIRKDLKVKAF 129
BLAST of CF417235 vs. ExPASy Swiss-Prot
Match: RNZN_WHEAT (Nuclear ribonuclease Z (Fragment) OS=Triticum aestivum GN=ELAC PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.972e-45 Identity = 79/109 (72.48%), Postives = 98/109 (89.91%), Query Frame = 1 Query: 289 MQLQGYKVEGLSIAGHETCIIFPSLDLAFDIGRCPSRALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEIHRRMDHSELNHTLVGLDVG 615 ++++GY VEG+SI GHETC+IFP+L LAFDIGRCP RA++Q+FLFISHAH+DHIGGLPMYVATRGLYR++PPTI VP ++E VE+LF++HR MD SELNHTLV LD+G Sbjct: 7 LEIEGYPVEGISIGGHETCVIFPTLSLAFDIGRCPQRAVAQDFLFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLRELVERLFDVHRAMDQSELNHTLVPLDIG 115
BLAST of CF417235 vs. ExPASy Swiss-Prot
Match: RNZC_ARATH (Ribonuclease Z, chloroplastic OS=Arabidopsis thaliana GN=CPZ PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.237e-38 Identity = 71/111 (63.96%), Postives = 87/111 (78.38%), Query Frame = 1 Query: 283 RGMQLQGYKVEGLSIAGHETCIIFPSLDLAFDIGRCPSRALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEIHRRMDHSELNHTLVGLDVG 615 +G++L+ Y +EG+S+ GHETC+I P L FDIGRCPSRA+ Q FLFI+HAH+DHIGGLPMYVA+RGLY ++PP I VP IKEDVE+L EIHR M ELN L+ L VG Sbjct: 74 KGVELESYAIEGISVGGHETCVIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGLPMYVASRGLYNLEPPKIFVPPSIKEDVEKLLEIHRTMGQVELNVELIPLAVG 184 The following BLAST results are available for this feature:
BLAST of CF417235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417235 ID=CF417235; Name=CF417235; organism=Citrus sinensis; type=EST; length=660bpback to top |