CF417236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417236 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 65/198 (32.83%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 27 AGIAGFGRSSESLPSQLGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSAFGEFYYVGLRQIIVGSKHVKI-PYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLRPCFDI-SGKKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLIL 614 AG+ G GR SLPSQL + KFSYC+ + SNL+L + S + +P + SS FYY+ L + VGS + I P ++ + ++G GG+I+DSG+T T+ +++V +EFI Q+ + SG CF S ++ +P ++ F GG + LP ENYF N ++CL + Sbjct: 216 AGLVGMGRGPLSLPSQLDVTKFSYCMTPI---GSSTPSNLLLGSLANSVTAGSPNTTLI--------QSSQIPTFYYITLNGLSVGSTRLPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQI---NLPVVNGSSSGFDLCFQTPSDPSNLQIPTFVMHFDGG-DLELPSENYFISPSNGLICLAM 398
BLAST of CF417236 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.618e-18 Identity = 65/204 (31.86%), Postives = 98/204 (48.04%), Query Frame = 3 Query: 27 AGIAGFGRSSESLPSQLGLKKFSYCLLSRKFDDAPVSSNLVLDTGPGSGDSKTPGLSYTPFYKNPVGSSSAFGEFYYVGLRQIIVGSKHVKIPYSYLVPGSDGNGGVIVDSGSTFTFMEGPLFEAVAKEFIRQMGNYSRAADVEKKSGLRPCF-DISGKKSVYLPELILKFKGGAKMALPPENYFALVGNEVLCLILFTDNAAG 635 AG+ G G SLPSQLG+ +FSYC+ S + S L L + +P + NP +YY+ L+ I VG ++ IP S DG GG+I+DSG+T T++ + AVA+ F Q+ + E SGL CF S +V +PE+ ++F GG + L +N V+CL + + + G Sbjct: 217 AGLIGMGWGPLSLPSQLGVGQFSYCMTSY---GSSSPSTLALGSAASGVPEGSPSTTLIHSSLNPT--------YYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQI---NLPTVDESSSGLSTCFQQPSDGSTVQVPEISMQFDGGV-LNLGEQNILISPAEGVICLAMGSSSQLG 405 The following BLAST results are available for this feature:
BLAST of CF417236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417236 ID=CF417236; Name=CF417236; organism=Citrus sinensis; type=EST; length=676bpback to top |