CF417240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.204e-49 Identity = 69/86 (80.23%), Postives = 79/86 (91.86%), Query Frame = -3 Query: 272 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 529 PMAAPKVRF+TKIYHPN+DKL RI LDI KDKWSPALQIRTVLLSIQALL+APNPDDPL+ ++ + WKTNEA+A+ETA+ WTRLYA Sbjct: 64 PMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQAIETARAWTRLYA 149 HSP 2 Score: 66.6254 bits (161), Expect = 1.204e-49 Identity = 33/57 (57.89%), Postives = 39/57 (68.42%), Query Frame = -2 Query: 513 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQ-SPYEGGVFKLELFLPEEYXNGCSK 680 QRLL+EP PGI A P E N RYF+V+I G ++ SP+EGG FK EL L EEY K Sbjct: 13 QRLLAEPVPGIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPK 69
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.180e-45 Identity = 61/86 (70.93%), Postives = 69/86 (80.23%), Query Frame = -3 Query: 272 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 529 PM P VRFLTKIYHPN+DKLGRICL K WSPALQIRTVLLSIQAL+ APNPDDPL ++AK WK NE +A+ A+EWT+ YA Sbjct: 62 PMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYA 147 HSP 2 Score: 68.9366 bits (167), Expect = 2.180e-45 Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = -2 Query: 531 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 680 + L +P PGI A+P+EDN+RYF + + GP QS YEGG F LELFLP+EY Sbjct: 12 ETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEY 61
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.779e-45 Identity = 88/95 (92.63%), Postives = 90/95 (94.74%), Query Frame = -3 Query: 263 FCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 547 F + PMAAPKVRFLTKIYHPNIDKLGRICLDI KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+NEAEAVETAKEWTRLYASGA Sbjct: 59 FLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 153 HSP 2 Score: 103.99 bits (258), Expect = 7.668e-22 Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = -2 Query: 513 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXNGCSK 680 QRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFLPEEY K Sbjct: 15 QRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPK 70
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.419e-45 Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = -3 Query: 263 FCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 547 F + PMAAPKVRFLTKIYHPNIDKLGRICLDI KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+NEAEAV+TAKEWTRLYASGA Sbjct: 59 FLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLYASGA 153 HSP 2 Score: 105.531 bits (262), Expect = 2.635e-22 Identity = 51/56 (91.07%), Postives = 51/56 (91.07%), Query Frame = -2 Query: 513 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXNGCSK 680 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY K Sbjct: 15 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPK 70
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.065e-39 Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = -3 Query: 272 GCSNWNYFCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 568 G N F + PM+APKVRFLTKIYHPNIDKLGRICLDI KDKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+HWKTNE EA+ A+EWTRLYA Sbjct: 50 GVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEKEAMARAREWTRLYA 148 HSP 2 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = -2 Query: 513 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXNGCSK 680 QRL++EPAPGISA+P+ DN RYF V I GP SP+EGGVF LELFL ++Y K Sbjct: 13 QRLMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPK 68
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.047e-39 Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = -3 Query: 272 FCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 547 F + PMAAPKVRF+TKIYHPN+DKLGRICLDI KDKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+ WKTNEA+A+ETA+ WTRLYA Sbjct: 57 FLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYA 148 HSP 2 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = -2 Query: 513 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXNGCSK 680 QRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEY K Sbjct: 13 QRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPK 68
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.047e-39 Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = -3 Query: 272 FCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 547 F + PMAAPKVRF+TKIYHPN+DKLGRICLDI KDKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+ WKTNEA+A+ETA+ WTRLYA Sbjct: 57 FLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYA 148 HSP 2 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = -2 Query: 513 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXNGCSK 680 QRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEY K Sbjct: 13 QRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPK 68
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.047e-39 Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = -3 Query: 272 FCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 547 F + PMAAPKVRF+TKIYHPN+DKLGRICLDI KDKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+ WKTNEA+A+ETA+ WTRLYA Sbjct: 57 FLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYA 148 HSP 2 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = -2 Query: 513 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXNGCSK 680 QRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEY K Sbjct: 13 QRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPK 68
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.047e-39 Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = -3 Query: 272 FCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 547 F + PMAAPKVRF+TKIYHPN+DKLGRICLDI KDKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+ WKTNEA+A+ETA+ WTRLYA Sbjct: 57 FLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYA 148 HSP 2 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = -2 Query: 513 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXNGCSK 680 QRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEY K Sbjct: 13 QRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPK 68
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.178e-38 Identity = 73/92 (79.35%), Postives = 84/92 (91.30%), Query Frame = -3 Query: 272 FCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 547 F + PMAAPKVRF+TKIYHPN+DKLGRICLDI KDKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+ WK+NEA+A+ETA+ WTRLYA Sbjct: 57 FLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQAIETARAWTRLYA 148 HSP 2 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = -2 Query: 513 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXNGCSK 680 QRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEY K Sbjct: 13 QRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPK 68 The following BLAST results are available for this feature:
BLAST of CF417240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417240 ID=CF417240; Name=CF417240; organism=Citrus sinensis; type=EST; length=681bpback to top |