CF417257

Overview
NameCF417257
Unique NameCF417257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: YAJO_ECOLI (Uncharacterized oxidoreductase yajO OS=Escherichia coli (strain K12) GN=yajO PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.300e-20
Identity = 61/173 (35.26%), Postives = 92/173 (53.18%), Query Frame = 3
Query:   45 LELRPLGNTGLRLS-----CVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKCGRYVDGF--DFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFTYMLD 542
            ++  PLG T LR+S     C+ FG    GN    + E  +   ++ A   GINFFDT+  Y    SE+++G+AL+     R + +V+TK    V       S  ++ RSID+SL RL +DYVDILQ H  ++ +    + ET+ AL    +AGK R+IG + +    F   L+
Sbjct:    1 MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDF-ARREDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNT---PIEETLEALNDVVKAGKARYIGASSMHASQFAQALE 169          

HSP 2 Score: 26.5646 bits (57), Expect = 1.300e-20
Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 1
Query:  616 DLLPYLKSKGVGVISASPLAMGLLT 690
            ++LP    +GV VI  SPLA G LT
Sbjct:  196 EMLPLCYQEGVAVIPWSPLARGRLT 220          
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase yqkF OS=Bacillus subtilis GN=yqkF PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.476e-18
Identity = 54/159 (33.96%), Postives = 92/159 (57.86%), Query Frame = 3
Query:   54 RPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKCG-RYVDG-----FDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGL 512
            R LG + L +S VG G   LG       +N A++ + EA  LGIN+ DT+  Y    +E+++G A++     R++ I++TK G R+ DG     +D S   +  ++ +SL RL+ DY+D+ Q H    G+++  ++ETI A ++ K+ G IR+ GI+ +
Sbjct:    4 RKLGTSDLDISEVGLGCMSLGT-----EKNKALSILDEAIELGINYLDTADLYDRGRNEEIVGDAIQNR---RHDIILATKAGNRWDDGSEGWYWDPSKAYIKEAVKKSLTRLKTDYIDLYQLHG---GTIEDNIDETIEAFEELKQEGVIRYYGISSI 151          

HSP 2 Score: 27.335 bits (59), Expect = 1.476e-18
Identity = 11/27 (40.74%), Postives = 18/27 (66.67%), Query Frame = 1
Query:  613 EDLLPYLKSKGVGVISASPLAMGLLTD 693
            E+ LP L+   + V++  P+A GLLT+
Sbjct:  180 EEWLPLLEEHQISVVARGPVAKGLLTE 206          
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: ARA2_YEAST (D-arabinose 1-dehydrogenase OS=Saccharomyces cerevisiae GN=ARA2 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18
Identity = 56/162 (34.57%), Postives = 89/162 (54.94%), Query Frame = 3
Query:  159 VREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAG--VPRNEYIVSTKCGRY-VDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFTYMLDRVPP-----GAVDVILSYCHYSINDSTLGGF 620
            ++ AF  GIN  DTSPYYG   SE + G+AL       PR+ Y + TK GR   + F++S + V  S+  S  RL   Y+D++  HD+EF     I+ E +  L+  K  G I+  GI+G P++  T++ +         G++D +LSYC+ ++ ++ L  F
Sbjct:   41 IKYAFSHGINAIDTSPYYGP--SEVLYGRALSNLRNEFPRDTYFICTKVGRIGAEEFNYSRDFVRFSVHRSCERLHTTYLDLVYLHDVEFVKFPDIL-EALKELRTLKNKGVIKNFGISGYPIDFITWLAEYCSTEESDIGSLDAVLSYCNLNLQNNKLLNF 199          
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.649e-17
Identity = 58/177 (32.77%), Postives = 94/177 (53.11%), Query Frame = 3
Query:   60 LGNTGLRLSCVGFGASPLG--NVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKCGRYVDG----FDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFTYMLDRVPPGAVDVI 572
            LG + L++  +G G + +G  N++  ++E      VREA R G+   DT+  YG   SE+++G+ L+     R + +++TK      G    FD S + + +S+DESL RL  DY+D+   H   F       +E + AL + K+AGKIR IG++   LE    + +    G VDV+
Sbjct:    6 LGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFN--REDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIH---FPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLE---QLKEANKDGLVDVL 174          

HSP 2 Score: 20.7866 bits (42), Expect = 2.649e-17
Identity = 9/21 (42.86%), Postives = 10/21 (47.62%), Query Frame = 1
Query:  625 PYLKSKGVGVISASPLAMGLL 687
            PY K   +  I   PL  GLL
Sbjct:  191 PYTKEHNISFIPYFPLVSGLL 211          
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase ydjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.805e-16
Identity = 63/202 (31.19%), Postives = 94/202 (46.53%), Query Frame = 3
Query:   57 PLGNTGLRLSCVGFGASPLGNV---FGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKCG----RYVDGF----------DFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTL 611
            PLG T + LS +G G   +G      G +     + ++ EA R GIN  DT+P Y    SE ++G+ALK   +PR + +V TKCG    R    F          + S E +   +  SL RL +DY+DI   H          + ET+  L + K  GKIR IG   +  +   ++ + +  G +D+I     YSI D  +
Sbjct:    5 PLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKK--LPREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSEGKIRAIGAANVDAD---HIREYLQYGELDII--QAKYSILDRAM 199          

HSP 2 Score: 25.0238 bits (53), Expect = 2.805e-16
Identity = 12/25 (48.00%), Postives = 15/25 (60.00%), Query Frame = 1
Query:  616 DLLPYLKSKGVGVISASPLAMGLLT 690
            +LLP  +  G+ V   SPL  GLLT
Sbjct:  202 ELLPLCRDNGIVVQVYSPLEQGLLT 226          
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.084e-16
Identity = 64/197 (32.49%), Postives = 101/197 (51.27%), Query Frame = 3
Query:   48 ELRPLGNTGLRLSCVGFGASPLG--NVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTK-CGRYVDG---FDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLP------------LEIFTYMLDRVPPGAVDVILSYC 584
            + R LG T L++  +GFGA+ +G  N+F  +++      VR A   G+NF DT+  YG   SE+++G+ ++  GV RNE I++TK   + VDG    D S E +   +++SL RL+ DY+D+   H   F      + E    L++ K+ GKI+ IG + L             LE+F      +   A   +L YC
Sbjct:    3 QTRTLGKTKLKVKRIGFGANAVGGHNLFPNLNDETGKDLVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGV-RNELIIATKGAHKEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVH---FPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYC 195          
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 6.156e-16
Identity = 50/164 (30.49%), Postives = 86/164 (52.44%), Query Frame = 3
Query:   45 LELRPLGNTGLRLSCVGFGASPLGN-VFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKCGRYVDGFDF----SAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLE 521
            +E   + +TG+  S +G G   +G  ++G   E  ++ ++R A   GI   DT+P YG   SE+++GKA+K  G  R++ I++TK              +  R+   ++ SL RLQ DY+D+ Q H   +      + ET   +++  +AGKIR IG++   +E
Sbjct:    1 MEYTSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYG-KRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVH---WPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIE 160          

HSP 2 Score: 22.7126 bits (47), Expect = 6.156e-16
Identity = 11/33 (33.33%), Postives = 15/33 (45.45%), Query Frame = 1
Query:  613 EDLLPYLKSKGVGVISASPLAMGLLTDNGPPEW 711
            E +LPY K   +  +    L  GLLT     E+
Sbjct:  187 ESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEY 219          
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: YGHZ_ECO57 (Uncharacterized protein yghZ OS=Escherichia coli O157:H7 GN=yghZ PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.003e-15
Identity = 58/204 (28.43%), Postives = 105/204 (51.47%), Query Frame = 3
Query:   15 LIQMAFPLR--KLELRPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASV-REAFRLGINFFDTSPYYGGT--LSEKMLGKALKAA-GVPRNEYIVSTKCGRYV----DGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSI 596
            ++ +A P R  +++ R  G +GLRL  +  G   L + FG V+  ++  ++ R+AF LGI  FD +  YG     +E+  G+ L+      R+E I+STK G  +     G   S + +  S+D+SL R+ L+YVDI   H ++  +    + ET  AL    ++GK  ++GI+    E    M++ +    + +++    Y++
Sbjct:    1 MVWLANPERYGQMQYRYCGKSGLRLPALSLG---LWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENT---PMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNL 198          

HSP 2 Score: 33.4982 bits (75), Expect = 5.003e-15
Identity = 20/43 (46.51%), Postives = 26/43 (60.47%), Query Frame = 1
Query:  598 MIQHWED---LLPYLKSKGVGVISASPLAMGLLTD---NGPPE 708
            ++  W D   LL  L++ GVG I+ +PLA GLLT    NG PE
Sbjct:  198 LLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPE 240          
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: YGHZ_ECOLI (Uncharacterized protein yghZ OS=Escherichia coli (strain K12) GN=yghZ PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.098e-14
Identity = 58/204 (28.43%), Postives = 105/204 (51.47%), Query Frame = 3
Query:   15 LIQMAFPLR--KLELRPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASV-REAFRLGINFFDTSPYYGGT--LSEKMLGKALKAA-GVPRNEYIVSTKCGRYV----DGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSI 596
            ++ +A P R  +++ R  G +GLRL  +  G   L + FG V+  ++  ++ R+AF LGI  FD +  YG     +E+  G+ L+      R+E I+STK G  +     G   S + +  S+D+SL R+ L+YVDI   H ++  +    + ET  AL    ++GK  ++GI+    E    M++ +    + +++    Y++
Sbjct:    1 MVWLANPERYGQMQYRYCGKSGLRLPALSLG---LWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENT---PMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNL 198          

HSP 2 Score: 32.3426 bits (72), Expect = 1.098e-14
Identity = 19/43 (44.19%), Postives = 26/43 (60.47%), Query Frame = 1
Query:  598 MIQHWED---LLPYLKSKGVGVISASPLAMGLLTD---NGPPE 708
            ++  W D   LL  L++ GVG I+ +PLA GLLT    NG P+
Sbjct:  198 LLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQ 240          
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 4.297e-13
Identity = 51/160 (31.87%), Postives = 78/160 (48.75%), Query Frame = 3
Query:   60 LGNTGLRLSCVGFGASPLGNVFGAVS-ENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKCGRYVDGFDFSAE----------RVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGIT 506
            LG+ GL +S  G G   +   +G    E D +  +  A   GI   DTS  YG   +E +LGKALK  G  R   +++TK G  V G +  AE           V  + + SL RL +D +D+   H ++     +I   T+  L+K  E GK+++IG++
Sbjct:   13 LGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALK--GGTRERVVLATKFG-IVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEI---TVGELKKLVEEGKLKYIGLS 166          

HSP 2 Score: 28.4906 bits (62), Expect = 4.297e-13
Identity = 11/30 (36.67%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  613 EDLLPYLKSKGVGVISASPLAMGLLTDNGP 702
            E+++P  +  G+G+++ SPL  G L+ +GP
Sbjct:  198 EEIIPTCRELGIGIVAYSPLGRGFLS-SGP 226          
The following BLAST results are available for this feature:
BLAST of CF417257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
YAJO_ECOLI1.300e-2035.26Uncharacterized oxidoreductase yajO OS=Escherichia... [more]
YQKF_BACSU1.476e-1833.96Uncharacterized oxidoreductase yqkF OS=Bacillus su... [more]
ARA2_YEAST3.295e-1834.57D-arabinose 1-dehydrogenase OS=Saccharomyces cerev... [more]
IOLS_BACSU2.649e-1732.77Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
YDJG_ECOLI2.805e-1631.19Uncharacterized oxidoreductase ydjG OS=Escherichia... [more]
YCCK_BACSU3.084e-1632.49Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
GS69_BACSU6.156e-1630.49General stress protein 69 OS=Bacillus subtilis GN=... [more]
YGHZ_ECO575.003e-1528.43Uncharacterized protein yghZ OS=Escherichia coli O... [more]
YGHZ_ECOLI1.098e-1428.43Uncharacterized protein yghZ OS=Escherichia coli (... [more]
A115_TOBAC4.297e-1331.88Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-187 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-003_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417257 ID=CF417257; Name=CF417257; organism=Citrus sinensis; type=EST; length=718bp
CAGAAGCCCTAAACTTAATTCAAATGGCATTCCCACTTCGCAAATTAGAG
CTCCGACCATTGGGCAACACGGGCCTCCGCCTCAGTTGCGTCGGCTTCGG
CGCCTCGCCGCTCGGCAACGTTTTTGGGGCCGTCTCTGAAAACGACGCCG
TTGCCTCCGTCCGCGAAGCATTTCGCCTTGGCATCAACTTCTTTGACACT
TCTCCATATTATGGAGGGACATTGTCTGAGAAGATGCTTGGTAAGGCACT
GAAAGCTGCGGGCGTTCCGAGAAATGAGTATATTGTGTCAACAAAATGCG
GGCGGTATGTTGACGGTTTTGATTTTAGTGCTGAGAGAGTGACTAGGAGC
ATTGATGAGAGCTTGGCGAGGTTGCAGCTTGATTACGTCGATATACTGCA
GTGCCATGACATTGAATTTGGGTCTCTTGACCAGATTGTGAATGAGACCA
TTCCTGCCCTTCAGAAGCAGAAGGAAGCAGGGAAAATCCGTTTCATTGGT
ATTACCGGACTTCCCTTGGAAATTTTTACCTACATGCTTGATCGGGTGCC
ACCTGGTGCAGTTGATGTAATTCTTTCGTACTGCCATTACAGTATTAATG
ATTCAACATTGGGAGGATTTACTGCCTTACTTGAAGAGCAAGGGTGTAGG
CGTCATTAGTGCTTCCCCTCTTGCAATGGGGCTTCTTACAGATAATGGTC
CCCCAGAATGGCACCCAG
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