CF417264

Overview
NameCF417264
Unique NameCF417264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417264 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.806e-28
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 3
Query:   12 VIALSGGHTLGRCHKERSGFEGPWTXNPLIFDNSYFTE 125
            ++ALSGGHTLGRCHKERSGFEG WT NPLIFDNSYFTE
Sbjct:  157 IVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNSYFTE 194          

HSP 2 Score: 66.2402 bits (160), Expect = 1.806e-28
Identity = 34/56 (60.71%), Postives = 38/56 (67.86%), Query Frame = 1
Query:  127 LLTGXKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAE 294
            L++G K+GLLQLPSDKAL+ DP FRPLVEK               HLKLSELGFAE
Sbjct:  195 LVSGEKEGLLQLPSDKALMADPAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250          
BLAST of CF417264 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.986e-28
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 3
Query:   12 VIALSGGHTLGRCHKERSGFEGPWTXNPLIFDNSYFTETL 131
            ++ALSG HTLGRCHK+RSGFEG WT NPLIFDNSYF E L
Sbjct:  156 IVALSGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELL 195          

HSP 2 Score: 69.707 bits (169), Expect = 3.986e-28
Identity = 36/59 (61.02%), Postives = 41/59 (69.49%), Query Frame = 1
Query:  121 RRLLTGXKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAEA 297
            + LL+G K+GLLQL SDKALLDDPVFRPLVEK               H+KLSELGFA+A
Sbjct:  192 KELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFADA 250          
BLAST of CF417264 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 8.796e-28
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 3
Query:   12 VIALSGGHTLGRCHKERSGFEGPWTXNPLIFDNSYFTETL 131
            ++ALSGGHTLGRCHKERSGFEG WT NPLIFDNSYF E L
Sbjct:  156 IVALSGGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEIL 195          

HSP 2 Score: 65.0846 bits (157), Expect = 8.796e-28
Identity = 32/58 (55.17%), Postives = 39/58 (67.24%), Query Frame = 1
Query:  121 RRLLTGXKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAE 294
            + +L+G K+GLLQLP+DKALLDDP+F P VEK               HLKLSELGFA+
Sbjct:  192 KEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFAD 249          
BLAST of CF417264 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.157e-19
Identity = 30/40 (75.00%), Postives = 32/40 (80.00%), Query Frame = 3
Query:   12 VIALSGGHTLGRCHKERSGFEGPWTXNPLIFDNSYFTETL 131
            ++ALSGGHTLGR H ERSGFEG WT  PL FDNSYF E L
Sbjct:  153 IVALSGGHTLGRAHPERSGFEGAWTQEPLKFDNSYFLELL 192          

HSP 2 Score: 48.521 bits (114), Expect = 1.157e-19
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 1
Query:  127 LLTGXKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGF 288
            LL G  +GLL+LP+DKALL+DP FR  V+                H KLSELGF
Sbjct:  191 LLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELGF 244          
BLAST of CF417264 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.701e-17
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 3
Query:   12 VIALSGGHTLGRCHKERSGFEGPWTXNPLIFDNSYFTETL 131
            ++ALSGGHTLG+   ERSGF+G WT +PL FDNSYF E L
Sbjct:  154 IVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELL 193          

HSP 2 Score: 46.2098 bits (108), Expect = 1.701e-17
Identity = 25/54 (46.30%), Postives = 30/54 (55.56%), Query Frame = 1
Query:  127 LLTGXKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGF 288
            LL    +GLL+LP+DKAL++DP FR  VE                H KLSELGF
Sbjct:  192 LLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
BLAST of CF417264 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.701e-17
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 3
Query:   12 VIALSGGHTLGRCHKERSGFEGPWTXNPLIFDNSYFTETL 131
            ++ALSGGHTLG+   ERSGF+G WT +PL FDNSYF E L
Sbjct:  154 IVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELL 193          

HSP 2 Score: 46.2098 bits (108), Expect = 1.701e-17
Identity = 25/54 (46.30%), Postives = 30/54 (55.56%), Query Frame = 1
Query:  127 LLTGXKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGF 288
            LL    +GLL+LP+DKAL++DP FR  VE                H KLSELGF
Sbjct:  192 LLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
BLAST of CF417264 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.634e-15
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 3
Query:   12 VIALSGGHTLGRCHKERSGFEGPWTXNPLIFDNSYFTETL 131
            ++ALSGGHTLGRCHKERSGFEGPWT NPL FDNSYFTE L
Sbjct:  156 IVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELL 195          

HSP 2 Score: 70.8626 bits (172), Expect = 6.073e-12
Identity = 41/74 (55.41%), Postives = 45/74 (60.81%), Query Frame = 1
Query:   82 GPXTLSFLTIPTS--RRLLTGXKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAEA 297
            GP T + L    S    LL+G K+GLLQLPSDKALL DP FRPLVEK               HLKLSELGFA+A
Sbjct:  177 GPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFRPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CF417264 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.634e-15
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 3
Query:   12 VIALSGGHTLGRCHKERSGFEGPWTXNPLIFDNSYFTETL 131
            ++ALSGGHTLGRCHKERSGFEGPWT NPL FDNSYFTE L
Sbjct:  156 IVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELL 195          

HSP 2 Score: 67.781 bits (164), Expect = 5.141e-11
Identity = 40/74 (54.05%), Postives = 44/74 (59.46%), Query Frame = 1
Query:   82 GPXTLSFLTIPTS--RRLLTGXKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAEA 297
            GP T + L    S    LL+G K+GLLQLPSDKALL DP F PLVEK               HLKLSELGFA+A
Sbjct:  177 GPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFCPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CF417264 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.804e-14
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = 3
Query:   12 VIALSGGHTLGRCHKERSGFEGPWTXNPLIFDNSYFTETL 131
            ++ALSGGHT+G  HKERSGFEGPWT NPLIFDNSYFTE L
Sbjct:  156 IVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELL 195          

HSP 2 Score: 73.1738 bits (178), Expect = 1.224e-12
Identity = 44/74 (59.46%), Postives = 45/74 (60.81%), Query Frame = 1
Query:   82 GPXTLSFLTIPTS--RRLLTGXKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAEA 297
            GP T + L    S    LLTG KDGLLQLPSDKALL D VFRPLVEK               HLKLSELGFAEA
Sbjct:  177 GPWTSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLKLSELGFAEA 250          
BLAST of CF417264 vs. ExPASy Swiss-Prot
Match: CCPR2_CRYNE (Putative heme-binding peroxidase OS=Cryptococcus neoformans GN=CNE03890 PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.756e-13
Identity = 23/36 (63.89%), Postives = 27/36 (75.00%), Query Frame = 3
Query:   12 VIALSGGHTLGRCHKERSGFEGPWTXNPLIFDNSYF 119
            ++ALSG H LGRCH +RSGF+GPW  NP  F N YF
Sbjct:  162 IVALSGAHNLGRCHADRSGFDGPWVVNPTRFSNQYF 197          

HSP 2 Score: 35.039 bits (79), Expect = 2.756e-13
Identity = 22/53 (41.51%), Postives = 27/53 (50.94%), Query Frame = 1
Query:  127 LLTGXKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELG 285
            LL G +  L+ LP+D AL++DP FRP VEK                 KL ELG
Sbjct:  200 LLPGTR--LMMLPTDMALIEDPSFRPWVEKYAADQNLFFKDFANAFGKLIELG 250          
The following BLAST results are available for this feature:
BLAST of CF417264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
APX2_ORYSJ1.806e-2889.47L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
APX1_ARATH3.986e-2880.00L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX2_ARATH8.796e-2885.00L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
APX4_ORYSJ1.157e-1975.00Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ORYSJ1.701e-1767.50Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI1.701e-1767.50Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX1_ORYSJ2.634e-1587.50L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI2.634e-1587.50L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_PEA3.804e-1482.50L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
CCPR2_CRYNE2.756e-1363.89Putative heme-binding peroxidase OS=Cryptococcus n... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-194 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-003_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417264 ID=CF417264; Name=CF417264; organism=Citrus sinensis; type=EST; length=623bp
GACAAGGATATGTGATTGCTCTCTCTGGTGGCCACACCCTGGGAAGGTGC
CACAAGGAGAGGTCTGGATTTGAGGGACCATGGACCCNCAACCCTCTCAT
TTTTGACAATTCCTACTTCACGGAGACTCTTGACTGGTGANAAGGATGGN
CTTCTGCAATTGCCATCCGACAAGGCCCTTCTGGATGACCCTGTTTTCCG
CCCTCTTGTTGAGAAATATGCTGCGGATGAGGACGCTTTCTTCGCTGATT
ATGCTGAGGCTCATCTCAAGCTCTCTGAGCTAGGATTTGCTGAAGCCTAA
ATTTACCTGAGTAAATAAATGGNTGGAATGATGCCAACAACAGTGTGCCT
CTATTTTATGTTTTTTGAATTCTCAGAAAATTCGAATTTCAANATGTTGN
TGGTGGAATTTTGNGGTTTTGTTTTGTTGCACATGGATGGATTGTGAAAA
GTTGGGTCGAATACTATGGTTACTATCATCCTTTAGAACTAATAATATCA
ACTGTTTTCAGACTANATGTGAATTATCCACCAAGTTTGGCTTANCTTTT
TCGCCGTATATGTGTCTGGNCACAAAATGCAGTATCGGTAGCATGATGTT
CAATGTTTGCTTGGTTTCTGTTG
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