CF417268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417268 vs. ExPASy Swiss-Prot
Match: TMM93_BOVIN (Transmembrane protein 93 OS=Bos taurus GN=TMEM93 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.879e-17 Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 175 LQSNMKVIYYSRTFLSIIGGVIAGILGFTGLMGFVFYFLIMAITSVCLMAKAKFSVHSYFDSWNRILLDGFLGGLMSFVLFWTFAYDIVHIF 450 ++ N V+ Y RT +S + G AGILG TGL GF+FY L + S+ L+ KA+ + YF S + G +GGL ++VLFWTF Y +VH++ Sbjct: 19 VRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASILLSLLLILKARRRWNKYFKSRRPLFTGGLIGGLFTYVLFWTFLYGMVHVY 110
BLAST of CF417268 vs. ExPASy Swiss-Prot
Match: TMM93_MOUSE (Transmembrane protein 93 OS=Mus musculus GN=Tmem93 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.978e-16 Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 175 LQSNMKVIYYSRTFLSIIGGVIAGILGFTGLMGFVFYFLIMAITSVCLMAKAKFSVHSYFDSWNRILLDGFLGGLMSFVLFWTFAYDIVHIF 450 ++ N V+ Y RT +S + G AGILG TGL GF+FY L + S+ L+ KA + YF S + G +GGL ++VLFWTF Y +VH++ Sbjct: 19 VRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAGRRWNKYFKSRRPLFTGGLIGGLFTYVLFWTFLYGMVHVY 110
BLAST of CF417268 vs. ExPASy Swiss-Prot
Match: TMM93_HUMAN (Transmembrane protein 93 OS=Homo sapiens GN=TMEM93 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.978e-16 Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 175 LQSNMKVIYYSRTFLSIIGGVIAGILGFTGLMGFVFYFLIMAITSVCLMAKAKFSVHSYFDSWNRILLDGFLGGLMSFVLFWTFAYDIVHIF 450 ++ N V+ Y RT +S + G AGILG TGL GF+FY L + S+ L+ KA + YF S + G +GGL ++VLFWTF Y +VH++ Sbjct: 19 VRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAGRRWNKYFKSRRPLFTGGLIGGLFTYVLFWTFLYGMVHVY 110
BLAST of CF417268 vs. ExPASy Swiss-Prot
Match: TMM93_DANRE (Transmembrane protein 93 OS=Danio rerio GN=tmem93 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.583e-16 Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 112 SVAGKKSNDVSNDLQIFNAENLQSNMKVIYYSRTFLSIIGGVIAGILGFTGLMGFVFYFLIMAITSVCLMAKAKFSVHSYFDSWNRILLDGFLGGLMSFVLFWTFAYDIVHIF 450 SVA K+ Q + +++ N V+ Y RT +S + G AGILG TGL GFVFYFL + S+ L+ KA + F S + G +GGL ++VLFWTF Y +VH++ Sbjct: 3 SVAAKREGP-----QFISEVSVRGNGAVLDYCRTSVSALSGATAGILGLTGLYGFVFYFLASFLLSLLLILKAGRRWNKCFKSRRLLFTGGLVGGLFTYVLFWTFLYGMVHVY 110
BLAST of CF417268 vs. ExPASy Swiss-Prot
Match: TMM93_XENTR (Transmembrane protein 93 OS=Xenopus tropicalis GN=tmem93 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.374e-16 Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 154 QIFNAENLQSNMKVIYYSRTFLSIIGGVIAGILGFTGLMGFVFYFLIMAITSVCLMAKAKFSVHSYFDSWNRILLDGFLGGLMSFVLFWTFAYDIVHIF 450 Q + ++ N V+ Y RT +S + G AGILG T L GF+FYFL + S+ L+ K+ + YF S + G +GGL ++VLFWTF Y +VH++ Sbjct: 12 QFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTALYGFIFYFLASFLLSLLLVLKSGRKWNKYFKSRKPLFTGGLIGGLFTYVLFWTFLYGMVHVY 110
BLAST of CF417268 vs. ExPASy Swiss-Prot
Match: TMM93_XENLA (Transmembrane protein 93 OS=Xenopus laevis GN=tmem93 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.406e-16 Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 154 QIFNAENLQSNMKVIYYSRTFLSIIGGVIAGILGFTGLMGFVFYFLIMAITSVCLMAKAKFSVHSYFDSWNRILLDGFLGGLMSFVLFWTFAYDIVHIF 450 Q + ++ N V+ Y RT +S + G AGILG T L GF+FYFL + S+ L+ K+ + YF S + G +GGL ++VLFWTF Y +VH++ Sbjct: 12 QFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTSLYGFIFYFLASFLLSLLLVLKSGRKWNKYFKSRKPLFTGGLVGGLFTYVLFWTFLYGMVHVY 110
BLAST of CF417268 vs. ExPASy Swiss-Prot
Match: TMM93_DICDI (Transmembrane protein 93 homolog OS=Dictyostelium discoideum GN=tmem93 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.406e-16 Identity = 38/97 (39.18%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 160 FNAENLQSNMKVIYYSRTFLSIIGGVIAGILGFTGLMGFVFYFLIMAITSVCLMAKAKFSVHSYFDSWNRILLDGFLGGLMSFVLFWTFAYDIVHIF 450 + E +Q N K + + + +SI+GG IAG++GF+G+ GF+FYF I K ++H YF + I D GLM ++LFWTF Y+I+HI+ Sbjct: 27 YEMEYIQRNNKTVSFCQIPISILGGAIAGVIGFSGVYGFLFYFFIYITFCSLFTLKENKNLHLYFPNPRSIWFDSIGAGLMPYILFWTFLYNIIHIY 123 The following BLAST results are available for this feature:
BLAST of CF417268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417268 ID=CF417268; Name=CF417268; organism=Citrus sinensis; type=EST; length=647bpback to top |