CF417271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 4.087e-16 Identity = 26/59 (44.07%), Postives = 35/59 (59.32%), Query Frame = 3 Query: 441 TGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 +GGP +WG CY + +C + + PC PG Y+ RG + I +NYNYGA GEAI Sbjct: 164 SGGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAI 220 HSP 2 Score: 37.3502 bits (85), Expect = 4.087e-16 Identity = 23/69 (33.33%), Postives = 32/69 (46.38%), Query Frame = 2 Query: 236 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCG--IWG 436 QFE R+ A GF+ Y++F+ A + F TG + +E+ AFLA TS G WG Sbjct: 105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATSGGPYSWG 171 HSP 3 Score: 25.409 bits (54), Expect = 4.087e-16 Identity = 10/24 (41.67%), Postives = 17/24 (70.83%), Query Frame = 1 Query: 607 GKPLRADLLSHPEYIEPNATLAFE 678 G+ + ADLL +PE + + T+AF+ Sbjct: 217 GEAIGADLLGNPELVATDPTVAFK 240
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 4.087e-16 Identity = 26/59 (44.07%), Postives = 35/59 (59.32%), Query Frame = 3 Query: 441 TGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 +GGP +WG CY + +C + + PC PG Y+ RG + I +NYNYGA GEAI Sbjct: 164 SGGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAI 220 HSP 2 Score: 37.3502 bits (85), Expect = 4.087e-16 Identity = 23/69 (33.33%), Postives = 32/69 (46.38%), Query Frame = 2 Query: 236 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCG--IWG 436 QFE R+ A GF+ Y++F+ A + F TG + +E+ AFLA TS G WG Sbjct: 105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATSGGPYSWG 171 HSP 3 Score: 25.409 bits (54), Expect = 4.087e-16 Identity = 10/24 (41.67%), Postives = 17/24 (70.83%), Query Frame = 1 Query: 607 GKPLRADLLSHPEYIEPNATLAFE 678 G+ + ADLL +PE + + T+AF+ Sbjct: 217 GEAIGADLLGNPELVATDPTVAFK 240
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.079e-15 Identity = 37/82 (45.12%), Postives = 47/82 (57.32%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R R A FL + + A GP AWGLCY E++P SYCD + +PC PG Y+GRG I I WN+NYG G+A+ Sbjct: 100 RKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDAT-DKQWPCYPGKSYHGRGPIQISWNFNYGPAGQAL 180
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.595e-14 Identity = 32/82 (39.02%), Postives = 44/82 (53.66%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R + A F ++ + A GP +WG C+ E +P+ YC+ S T+PC G YYGRG + + WNYNYG G AI Sbjct: 137 RKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSA--TWPCASGKRYYGRGPMQLSWNYNYGLCGRAI 216 HSP 2 Score: 26.1794 bits (56), Expect = 1.595e-14 Identity = 10/27 (37.04%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 601 LLGKPLRADLLSHPEYIEPNATLAFEA 681 L G+ + DLL++P+ + +A +AF+A Sbjct: 211 LCGRAIGVDLLNNPDLVANDAVIAFKA 237
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 369 IR*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 +R R A FL ++ + A GP AWG C+ E +PS +YC S Y PC PG YYGRG + + WNYNYG GEA+ Sbjct: 52 VRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRY--PCAPGKSYYGRGPLQLSWNYNYGPCGEAL 132
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 38/83 (45.78%), Postives = 46/83 (55.42%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R R A FL ++ G A GP AWG CYN E++P SYC YPC PG +Y+GRG + + WNYNYG G AI Sbjct: 103 RKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDP--NYPCAPGKQYFGRGPMQLSWNYNYGQCGRAI 183
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 38/83 (45.78%), Postives = 46/83 (55.42%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R R A FL ++ G A GP AWG CYN E++P SYC YPC PG +Y+GRG + + WNYNYG G AI Sbjct: 125 RKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDP--NYPCAPGKQYFGRGPMQLSWNYNYGQCGRAI 205
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.294e-13 Identity = 33/82 (40.24%), Postives = 44/82 (53.66%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R R A FL ++ + A GP +WG C+ E +P YC S + PC PG +YYGRG I + +N+NYG G AI Sbjct: 140 RKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEW--PCAPGRKYYGRGPIQLSFNFNYGPAGRAI 219 HSP 2 Score: 25.409 bits (54), Expect = 1.294e-13 Identity = 9/24 (37.50%), Postives = 18/24 (75.00%), Query Frame = 1 Query: 607 GKPLRADLLSHPEYIEPNATLAFE 678 G+ + DLLS+P+ + +AT++F+ Sbjct: 216 GRAIGVDLLSNPDLVATDATVSFK 239
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.684e-13 Identity = 32/82 (39.02%), Postives = 43/82 (52.44%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R + A F ++ + A GP +WG C+ E +PS +YC S + PC G YYGRG + + WNYNYG G AI Sbjct: 122 RKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEW--PCASGKSYYGRGPMQLSWNYNYGQCGRAI 201 HSP 2 Score: 23.8682 bits (50), Expect = 1.684e-13 Identity = 8/25 (32.00%), Postives = 18/25 (72.00%), Query Frame = 1 Query: 607 GKPLRADLLSHPEYIEPNATLAFEA 681 G+ + +DLL++P+ + + +AF+A Sbjct: 198 GRAIGSDLLNNPDLVSNDPVIAFKA 222
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 38/82 (46.34%), Postives = 46/82 (56.10%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R R A FL ++ + A GP AWG C+ E +PS +YC S +PC PG +YYGRG I I WNYNYG G AI Sbjct: 127 RKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-TYC--SATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAI 205 The following BLAST results are available for this feature:
BLAST of CF417271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417271 ID=CF417271; Name=CF417271; organism=Citrus sinensis; type=EST; length=682bpback to top |