CF417333

Overview
NameCF417333
Unique NameCF417333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9338 contig Csv1_Contig9338:573..1290. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417333 vs. ExPASy Swiss-Prot
Match: MTAD_METS3 (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=mtaD PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.827e-20
Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 2
Query:    2 IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 418
            IWP E+N+T E  YI  LL  IELI SG T F++    ++ ++AKAVE  G+RA L    +D G+           +  I+    L+ K +  ADGRI+++FG      A+  LL + R +A E+ TGIH+HV+E   E
Sbjct:   89 IWPMEANLTSEYCYIGALLGAIELIKSGTTTFSDMYF-YMEDVAKAVEESGIRAVLSYGMIDFGDD-------EKREHEIKENIALFEKCNGMADGRIKVFFGPHSPYTASKDLLEDVRWLANEYNTGIHIHVSETQKE 219          

HSP 2 Score: 31.5722 bits (70), Expect = 2.827e-20
Identity = 11/25 (44.00%), Postives = 20/25 (80.00%), Query Frame = 3
Query:  468 FLDKIEFLQNNLLSAHTVWVNHTEL 542
            +LD I FL  ++++AH+VW++H E+
Sbjct:  234 YLDSIGFLGPDVVAAHSVWLSHNEI 258          
BLAST of CF417333 vs. ExPASy Swiss-Prot
Match: MTAD_METBF (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=mtaD PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 83/284 (29.23%), Postives = 112/284 (39.44%), Query Frame = 2
Query:    2 IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE----XXXXXXXXXXXXRDCYILGQDRIPAEQL--------AFGSYSLGQPH*V-DEMYLAS-------LINKGREVFAN-------------------------GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKAD 718
            IWP E+ +T ED Y  +LL  +E+I SG T FA+    ++ E AKAVE  GLRA L         GL   W        ++  K        AADGRI+  +G       ++  L + R+ A     GIH+H+ E   E                 D   LG D + A  +          G   +   H V   M LAS       ++ KG  V                             T  P ALPA  VL+M T+NGAK++    + G L+ G KAD
Sbjct:   88 IWPAEAKLTAEDVYKGSLLACLEMIRSGTTSFADM-YFYMDETAKAVEASGLRASLC-------HGLIELWNEEKGATDLKEGKRFVRAWQGAADGRIKTMYGPHAPNTCSEEFLAKVREEANRDGAGIHIHLLETEAELLAMKERYGKCSVHLLEDIGFLGPDVLAAHCVWLSDGDIEILGKRGVNVSHNVISNMKLASGIAPVYKMLEKGVNVSLGTDGCASNNNLDLFEEMKTAALLHKVNTFSPTALPARQVLQMGTVNGAKAL--GTETGMLKVGMKAD 361          
BLAST of CF417333 vs. ExPASy Swiss-Prot
Match: YDI4_SCHPO (Uncharacterized protein C1F8.04c OS=Schizosaccharomyces pombe GN=SPAC1F8.04c PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 83/295 (28.14%), Postives = 118/295 (40.00%), Query Frame = 2
Query:    2 IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA---GGQHVSEMAKAVELLGLRACLVQSTMD-----CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEXXXXXXXXXXXXRDCYILG----------------QDRIPAEQLAFGSYSLGQPH*VDEMYLASLINKGREVF--------------ANGTTD-----------PAAL-------PAETVLRMATINGAKSVLWDNDIGSLEAGKKAD 718
            +W  + N T+ED Y+++ L   E++ SG T F EA       +    KAV   G+R C+ +  MD        G+     +    + +    E ++K H   +GR+ IWFG R     ++ L  +   +AR    GI MH AE+  +              C  LG                QD    E+   G+     P  V    L S I   +E+                N T D           P AL       PAE ++ MATINGAK+ L  +D+GSLE GKKAD
Sbjct:   91 VWKMQGNFTQEDGYVASQLTIAEMLKSGTTTFVEALFAQRYGIEGAVKAVIESGIRGCIGKVVMDQPRYATQTGVSMHEGLIENSNSLNQAVESHSKFHGKGNGRVEIWFGARTPGGVSEELYRKMVKIARANNIGITMHCAEVKADREFFASKEHTPMTYCKDLGLLGPKTVLAHMVHLDTQDLEILEKHGNGTSVAHCP--VSNSKLGSGIAPLKEMLEKSIIVGIGCDGCPCNNTMDLLQEMKMASLLPKALHGDPSIVPAEKIVEMATINGAKA-LGRDDLGSLEVGKKAD 382          
BLAST of CF417333 vs. ExPASy Swiss-Prot
Match: MTAD_METAC (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanosarcina acetivorans GN=mtaD PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 83/284 (29.23%), Postives = 117/284 (41.20%), Query Frame = 2
Query:    2 IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV----AEIPYEXXXXXXXXXXXXRDCYILGQDRIPAE--QLAFGSYSLGQPH*VD-------EMYLAS-------LINKGREV-------FANGTTD------------------PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKAD 718
            IWP E+ +  ED Y  +LL  +E+I SG T FA+    ++ E AKAVE  GLRA L         GL   W     +  ++  K        AADGRI+  +G       ++  L + ++ A     G+H+HV    AE+                D    G D + A    L+ G   + +   V+        M LAS       ++ KG  V        +N   D                  P ALPA  VL MAT+NGAK++    + G L+ GKKAD
Sbjct:   88 IWPAEAQLKAEDVYKGSLLACLEMIKSGTTSFADM-YFYMDETAKAVEASGLRASL-------SHGLIELWNEEKGEADLKEGKRFVRAWQGAADGRIKTMYGPHAPNTCSEEFLTKVKEEAHRDGAGLHIHVLETEAELNAMKERYGKCSVHLLEDIGFFGPDVLAAHCVWLSDGDIEILRQREVNVSHNPISNMKLASGIAPVYKMLEKGVNVTLGTDGCASNNNLDLFEEIKTAALLHKVSTGNPTALPARQVLEMATVNGAKAL--GTETGMLKVGKKAD 361          
BLAST of CF417333 vs. ExPASy Swiss-Prot
Match: MTAD_THEPX (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter sp. (strain X514) GN=mtaD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14
Identity = 46/139 (33.09%), Postives = 74/139 (53.24%), Query Frame = 2
Query:    2 IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 418
            IWP ES ++ ED Y  +LL  IE+I+SG T F +     + E+AKA E +G+R  L +  ++  +            + ++  ++LY   H+ ADGRI++  G       +   L E  ++A+E  TGIH+HV+E   E
Sbjct:   88 IWPVESKLSAEDVYWGSLLSMIEMIYSGTTTFCDMYF-FMDEVAKATEEVGIRGVLTRGIIEESDA-------EINKEKLRDTRKLYNTWHNKADGRIKVMVGPHAPYTCSSSYLKEVVELAKELNTGIHIHVSETKKE 218          
BLAST of CF417333 vs. ExPASy Swiss-Prot
Match: MTAD_THEP3 (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=mtaD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14
Identity = 46/139 (33.09%), Postives = 74/139 (53.24%), Query Frame = 2
Query:    2 IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 418
            IWP ES ++ ED Y  +LL  IE+I+SG T F +     + E+AKA E +G+R  L +  ++  +            + ++  ++LY   H+ ADGRI++  G       +   L E  ++A+E  TGIH+HV+E   E
Sbjct:   88 IWPVESKLSAEDVYWGSLLSMIEMIYSGTTTFCDMYF-FMDEVAKATEEVGIRGVLTRGIIEESDA-------EINKEKLRDTRKLYNTWHNKADGRIKVMVGPHAPYTCSSSYLKEVVELAKELNTGIHIHVSETKKE 218          
BLAST of CF417333 vs. ExPASy Swiss-Prot
Match: MTAD_METMA (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanosarcina mazei GN=mtaD PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.380e-14
Identity = 48/139 (34.53%), Postives = 68/139 (48.92%), Query Frame = 2
Query:    2 IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 418
            IWP E+ +T ED Y  +LL  +E+I SG T FA+     + E AKAVE  GLRA L         GL   W     ++ ++  K        AA GRI+  +G       +D  L + ++ AR+   G+H+HV E   E
Sbjct:   88 IWPAEAQLTAEDVYRGSLLACLEMIRSGTTSFADM-YFFMDETAKAVEASGLRASL-------SHGLIELWNEEKGENDLKEGKRFVRAWQGAAKGRIKTMYGPHAPNTCSDEFLAKVKEAARQDGAGLHIHVLETEAE 218          

HSP 2 Score: 24.6386 bits (52), Expect = 2.380e-14
Identity = 10/28 (35.71%), Postives = 18/28 (64.29%), Query Frame = 3
Query:  459 TVTFLDKIEFLQNNLLSAHTVWVNHTEL 542
            +V  LD I F   ++L+AH VW++  ++
Sbjct:  230 SVHMLDDIGFFGPDVLAAHCVWLSDGDI 257          
BLAST of CF417333 vs. ExPASy Swiss-Prot
Match: MTAD_THETN (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter tengcongensis GN=mtaD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12
Identity = 76/285 (26.67%), Postives = 119/285 (41.75%), Query Frame = 2
Query:    2 IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE----XXXXXXXXXXXXRDCYILGQDRIPAE--QLAFGSYSLGQPH*VDEMY-------LAS-------LINKGREVFANGTTDPAA----LPAETVLRMATINGA----------------------KSVLWDNDIGSLEAGKKAD 718
            IWP E+ +T ED Y  +LL  IE+I+SG T + +     + E+AKA E +G+R  +         G+      +  ++ ++  + LY   +  A+GRI++  G           L E  D+A+   TGIH+HV+E   E                +D  I     + A    L      + +   V  +Y       LAS       ++ KG  V A GT  PA+       E +   ATIN A                      +++LW+ +IG++E GKKAD
Sbjct:   87 IWPLEARLTAEDVYWGSLLSMIEMIYSGTTTYCDM-YFFMEEVAKATEEIGIRGVI-------SRGIIEEQDAKVNEEKLKDTENLYNAWNGKAEGRIKVMVGPHAPYTCGPTYLKEILDLAKRLGTGIHIHVSETKREVEESLEKYGKTPVQHLKDLGIFEVPTVAAHCVHLTDEDIEVLKEMKVSPVYNPTSNLKLASGFAPVEKMLKKGINV-ALGTDGPASNNNLNMFEEIHFAATINKALNEDALSVPAFEALKMATVSGARALLWEREIGTIEVGKKAD 362          
BLAST of CF417333 vs. ExPASy Swiss-Prot
Match: MTAD_PELTS (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=mtaD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12
Identity = 48/135 (35.56%), Postives = 66/135 (48.89%), Query Frame = 2
Query:    2 IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 406
            IWP E  +  ED Y  T+LC +E+I SG T FA+     +  +A AVE  G+RACL +  +  G G     A +  D+ +   +E     +  ADGRI   FG           L +  D+A     GIH+HVAE
Sbjct:   92 IWPVEERLQPEDIYWGTMLCCLEMIKSGTTTFADMYFS-MERVAAAVEESGMRACLSRGMIGVGSG-----ARKAIDESLSFVRE----WNGGADGRITAMFGPHAPYTCPPEYLKKVVDLAAREGAGIHIHVAE 216          
BLAST of CF417333 vs. ExPASy Swiss-Prot
Match: MTAD_SYNWW (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=mtaD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11
Identity = 46/139 (33.09%), Postives = 66/139 (47.48%), Query Frame = 2
Query:    2 IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 418
            IWP E+ +T ED Y  T+L  +E+I SG T F +     + E+A+AVEL G+RA L +  +  G           ++  I+  +EL  K    A GRI    G           L     ++ E + GIH+HVAE   E
Sbjct:   89 IWPLEAKLTPEDIYWGTMLAIVEMIKSGTTTFNDMYFC-MDEVARAVELSGMRAVLARGMVGVGP---------ESEQAIEDSRELIGKWQGQAGGRISFRLGPHAPYTCPPAYLERVMQLSDELQAGIHIHVAETRVE 217          
The following BLAST results are available for this feature:
BLAST of CF417333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MTAD_METS32.827e-2038.855-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_METBF9.046e-1629.235-methylthioadenosine/S-adenosylhomocysteine deami... [more]
YDI4_SCHPO1.181e-1528.14Uncharacterized protein C1F8.04c OS=Schizosaccharo... [more]
MTAD_METAC2.632e-1529.235-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_THEPX2.228e-1433.095-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_THEP32.228e-1433.095-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_METMA2.380e-1434.535-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_THETN2.724e-1226.675-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_PELTS2.724e-1235.565-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_SYNWW1.352e-1133.095-methylthioadenosine/S-adenosylhomocysteine deami... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-263 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417333 ID=CF417333; Name=CF417333; organism=Citrus sinensis; type=EST; length=719bp
AATTTGGCCTTACGAATCTAACATGACTGAGGAGGATTCTTACATCTCCA
CTTTACTGTGCGGAATTGAACTTATTCACTCTGGTGTAACGTGTTTTGCT
GAAGCTGGAGGGCAGCATGTAAGTGAAATGGCTAAAGCGGTTGAGTTACT
GGGTCTACGTGCATGTTTAGTCCAGTCAACCATGGACTGTGGGGAGGGTT
TACCTGCATCTTGGGCTGTTCGCACTACAGATGATTGTATTCAGTCTCAA
AAGGAGCTTTATGCGAAGCACCATCATGCAGCCGATGGGCGCATCAGAAT
ATGGTTTGGAATTAGACAAATCATGAATGCAACTGATCGCTTGCTACTTG
AAACAAGAGACATGGCTAGAGAATTTAAAACAGGAATCCACATGCATGTT
GCAGAGATACCCTACGAGNAATCAAGTTGTGATGGATACTCGAAAAGTTG
ATCACGGGACTGTTACATTCTTGGACAAGATAGAATTCCTGCAGAACAAC
TTGCTTTCGGCTCATACAGTTTGGGTCAACCACACTGAGTTGATGAGATG
TACTTAGCTTCTTTGATTAACAAAGGACGGGAAGTGTTTGCAAATGGAAC
AACTGATCCTGCAGCTCTCCCTGCTGAAACGGTGCTCAGAATGGCAACAA
TAAATGGTGCAAAATCAGTTCTCTGGGACAATGATATAGGGTCACTTGAG
GCTGGGAAAAAGGCTGACA
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