CF417343

Overview
NameCF417343
Unique NameCF417343
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417343 vs. ExPASy Swiss-Prot
Match: SUC3_ARATH (Sucrose transport protein SUC3 OS=Arabidopsis thaliana GN=SUC3 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.480e-60
Identity = 112/158 (70.89%), Postives = 138/158 (87.34%), Query Frame = 1
Query:    1 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 474
            SVVLG+SSFLIEPMC+ +G+R+VWA+SNF VFACMA TA+IS++S+ +   GIE+ +  N+  + A+++VF LLGFPLAITYSVPF++TAE+TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD LFGGGN+PAFVLAS++A A GV+A  +LP L
Sbjct:  425 SVVLGISSFLIEPMCQRMGARVVWALSNFTVFACMAGTAVISLMSLSDDKNGIEYIMRGNETTRTAAVIVFALLGFPLAITYSVPFSVTAEVTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDQLFGGGNLPAFVLASVAAFAAGVIALQRLPTL 582          
BLAST of CF417343 vs. ExPASy Swiss-Prot
Match: SUT2_ORYSJ (Sucrose transport protein 2 OS=Oryza sativa subsp. japonica GN=SUT2 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 8.514e-37
Identity = 80/157 (50.96%), Postives = 109/157 (69.43%), Query Frame = 1
Query:    1 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVR-EYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 468
            SV+LG +S ++E +CR  G+ LVW +SN ++  C     +I+ ++   +Y        G    I +ASLVVFT+LG PLAITYS+P+A+ A    + G GQGLA+G+LNLAIVIPQ+IVSLG+GPWD LFGGGN PAF +A+ ++  GG+VA L LP
Sbjct:  337 SVLLGFTSIVLEKLCRKWGAGLVWGVSNILMALCFVAMLVITYVAKNMDYPPSGVPPTG----IVIASLVVFTILGAPLAITYSIPYAMAASRVENLGLGQGLAMGILNLAIVIPQVIVSLGSGPWDQLFGGGNAPAFAVAAAASFIGGLVAILGLP 489          
BLAST of CF417343 vs. ExPASy Swiss-Prot
Match: SUT2_ORYSI (Sucrose transport protein 2 OS=Oryza sativa subsp. indica GN=SUT2M PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 8.514e-37
Identity = 80/157 (50.96%), Postives = 109/157 (69.43%), Query Frame = 1
Query:    1 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVR-EYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 468
            SV+LG +S ++E +CR  G+ LVW +SN ++  C     +I+ ++   +Y        G    I +ASLVVFT+LG PLAITYS+P+A+ A    + G GQGLA+G+LNLAIVIPQ+IVSLG+GPWD LFGGGN PAF +A+ ++  GG+VA L LP
Sbjct:  337 SVLLGFTSIVLEKLCRKWGAGLVWGVSNILMALCFVAMLVITYVAKNMDYPPSGVPPTG----IVIASLVVFTILGAPLAITYSIPYAMAASRVENLGLGQGLAMGILNLAIVIPQVIVSLGSGPWDQLFGGGNAPAFAVAAAASFIGGLVAILGLP 489          
BLAST of CF417343 vs. ExPASy Swiss-Prot
Match: SUC4_ARATH (Sucrose transport protein SUC4 OS=Arabidopsis thaliana GN=SUC4 PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.151e-33
Identity = 76/156 (48.72%), Postives = 104/156 (66.67%), Query Frame = 1
Query:    1 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 468
            SV LG++S L+E +CR  G+  VW ISN ++  C     I S ++   + G I H      +I  A++++FT+LG PLAITYSVP+A+ +      G GQGL++GVLNLAIVIPQ+IVS+G+GPWD LFGGGN PA  + + +   GG+VA L LP
Sbjct:  347 SVFLGITSVLMEKLCRKWGAGFVWGISNILMAICFLGMIITSFVA--SHLGYIGHE-QPPASIVFAAVLIFTILGIPLAITYSVPYALISIRIESLGLGQGLSLGVLNLAIVIPQVIVSVGSGPWDQLFGGGNSPALAVGAATGFIGGIVAILALP 499          
BLAST of CF417343 vs. ExPASy Swiss-Prot
Match: SUT_SPIOL (Sucrose transport protein OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.963e-33
Identity = 74/163 (45.40%), Postives = 110/163 (67.48%), Query Frame = 1
Query:    1 SVVLGVSSFLIEPMCRWIG-SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGAN------QAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 468
            SVVLGV S  IE + R +G ++ +W I N I+  C+A T +++  +  E+     H +G+         +K  +L +F +LG PLAIT+S+PFA+ +  +A SG GQGL++GVLNLAIV+PQM VS+ +GPWDA+FGGGN+PAFV+ +++A A  V++   LP
Sbjct:  350 SVVLGVMSLSIEGLARMVGGAKRLWGIVNIILAVCLAMTVLVTKSA--EHFRDSHHIMGSAVPPPPPAGVKGGALAIFAVLGIPLAITFSIPFALASIFSASSGSGQGLSLGVLNLAIVVPQMFVSVTSGPWDAMFGGGNLPAFVVGAVAATASAVLSFTLLP 510          
BLAST of CF417343 vs. ExPASy Swiss-Prot
Match: SUC1_ARATH (Sucrose transport protein SUC1 OS=Arabidopsis thaliana GN=SUC1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.563e-33
Identity = 78/163 (47.85%), Postives = 112/163 (68.71%), Query Frame = 1
Query:    1 SVVLGVSSFLIEPMCRWIGSRL-----VWAISNFIVFACMATTAIISVISV--REYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 468
            S+VLG  S  +E    WIG +L     +W I NFI+ A +A T +++  +   R+ +G +    G + ++K  +L +F +LG PLAIT+S PFA+ +  ++ SG GQGL++GVLNLAIVIPQMIVSLG GP+DALFGGGN+PAF++A+++A   GV+A   LP
Sbjct:  342 SIVLGFMSLGVE----WIGRKLGGAKRLWGIVNFILAAGLAMTVLVTKFAEDHRKTAGDLA---GPSASVKAGALSLFAVLGIPLAITFSTPFALASIFSSCSGAGQGLSLGVLNLAIVIPQMIVSLGGGPFDALFGGGNLPAFIVAAIAAAISGVLALTVLP 497          
BLAST of CF417343 vs. ExPASy Swiss-Prot
Match: SUC9_ARATH (Sucrose transport protein SUC9 OS=Arabidopsis thaliana GN=SUC9 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.458e-33
Identity = 72/156 (46.15%), Postives = 105/156 (67.31%), Query Frame = 1
Query:    1 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 468
            S+VLGV S +I  + + IG++ +W   N I+  C+A T +++  +           +  N AI+  +L +F +LG PLAIT+S+PFA+ + +++ SG GQGL++GVLN+AIVIPQMIVS G GP DALFGGGN+P FV+ +++AL   VVA   LP
Sbjct:  337 SIVLGVMSLVIGVISKKIGAKRLWGAVNIILAVCLAMTVLVTKKAEEHRKIAGRMALPTN-AIRDGALSLFAILGIPLAITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLPGFVVGAIAALISSVVALTVLP 491          
BLAST of CF417343 vs. ExPASy Swiss-Prot
Match: SUC2_ARATH (Sucrose transport protein SUC2 OS=Arabidopsis thaliana GN=SUC2 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.272e-32
Identity = 74/163 (45.40%), Postives = 107/163 (65.64%), Query Frame = 1
Query:    1 SVVLGVSSFLIEPMCRWIGSRL-----VWAISNFIVFACMATTAIIS--VISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 468
            ++VLG  S  +E    WIG +L     +W I NFI+  C+A T +++    + R   GG + G   N  +   +L +F +LG P AIT+S+PFA+ +  + +SG GQGL++GVLNLAIV+PQM++S+G GP+D LFGGGNIPAFVL +++A   GV+A   LP
Sbjct:  340 AIVLGFMSLGVE----WIGRKLGGAKRLWGIVNFILAICLAMTVVVTKQAENHRRDHGGAKTGPPGN--VTAGALTLFAILGIPQAITFSIPFALASIFSTNSGAGQGLSLGVLNLAIVVPQMVISVGGGPFDELFGGGNIPAFVLGAIAAAVSGVLALTVLP 496          
BLAST of CF417343 vs. ExPASy Swiss-Prot
Match: SUC8_ARATH (Sucrose transport protein SUC8 OS=Arabidopsis thaliana GN=SUC8 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.555e-30
Identity = 72/159 (45.28%), Postives = 105/159 (66.04%), Query Frame = 1
Query:    1 SVVLGVSSFLIEPMCRWIG-SRLVWAISNFIVFACMATTAIISVISV--REYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 468
            S+VLG+ S  IE + + IG ++ +W   N I+  C+A T +++  +   R  +G +         I+  +L +F LLG PLAIT+S+PFA+ + +++ SG GQGL++GVLN+AIVIPQMIVS G GP DALFGGGN+P FV+ +++A    VVA   LP
Sbjct:  337 SIVLGIVSLGIEGISKKIGGAKRLWGAVNIILAVCLAMTVLVTKKAEEHRRIAGPMAL---PTDGIRAGALTLFALLGIPLAITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLPRFVVGAIAAAISSVVAFTVLP 492          
BLAST of CF417343 vs. ExPASy Swiss-Prot
Match: SUC6_ARATH (Putative sucrose transport protein SUC6 OS=Arabidopsis thaliana GN=SUC6 PE=5 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.316e-29
Identity = 70/159 (44.03%), Postives = 103/159 (64.78%), Query Frame = 1
Query:    1 SVVLGVSSFLIEPMCRWIG-SRLVWAISNFIVFACMATTAIISVISV--REYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 468
            S+VLG  S  IE + R +G ++ +W   N I+  C+A T +++  +   R  +G +         I+  +L +F LLG PLAIT+S+PFA+ + +++ SG GQGL++GVLN+ IVIPQM+VS G GP DALFGGGN+P FV+ +++A    VVA   LP
Sbjct:  337 SIVLGFMSLGIEGISRKMGGAKRLWGAVNIILAVCLAMTVLVTKKAEEHRRIAGPMAL---PTDGIRAGALTLFALLGIPLAITFSIPFALASIISSSSGAGQGLSLGVLNMTIVIPQMVVSFGVGPIDALFGGGNLPGFVVGAIAAAISSVVAFSVLP 492          
The following BLAST results are available for this feature:
BLAST of CF417343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SUC3_ARATH5.480e-6070.89Sucrose transport protein SUC3 OS=Arabidopsis thal... [more]
SUT2_ORYSJ8.514e-3750.96Sucrose transport protein 2 OS=Oryza sativa subsp.... [more]
SUT2_ORYSI8.514e-3750.96Sucrose transport protein 2 OS=Oryza sativa subsp.... [more]
SUC4_ARATH1.151e-3348.72Sucrose transport protein SUC4 OS=Arabidopsis thal... [more]
SUT_SPIOL1.963e-3345.40Sucrose transport protein OS=Spinacia oleracea PE=... [more]
SUC1_ARATH2.563e-3347.85Sucrose transport protein SUC1 OS=Arabidopsis thal... [more]
SUC9_ARATH7.458e-3346.15Sucrose transport protein SUC9 OS=Arabidopsis thal... [more]
SUC2_ARATH1.272e-3245.40Sucrose transport protein SUC2 OS=Arabidopsis thal... [more]
SUC8_ARATH1.555e-3045.28Sucrose transport protein SUC8 OS=Arabidopsis thal... [more]
SUC6_ARATH1.316e-2944.03Putative sucrose transport protein SUC6 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-273 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417343 ID=CF417343; Name=CF417343; organism=Citrus sinensis; type=EST; length=681bp
TCAGTTGTTCTTGGCGTCAGTTCTTTCTTAATTGAACCTATGTGTCGGTG
GATAGGTTCAAGGCTTGTATGGGCAATCAGCAACTTTATTGTGTTTGCCT
GTATGGCAACCACGGCTATCATTAGTGTGATATCTGTCAGAGAATATTCT
GGAGGGATTGAACATGGAATTGGAGCGAATCAAGCAATCAAGGTGGCTTC
CTTGGTTGTATTTACCCTGCTTGGTTTCCCTCTTGCTATTACCTATAGTG
TTCCCTTTGCTATCACGGCGGAGTTAACTGCTGATTCGGGTGGTGGCCAA
GGATTGGCAATAGGAGTTCTGAATCTCGCAATTGTTATTCCACAGATGAT
TGTATCACTTGGTGCGGGTCCATGGGATGCTCTATTTGGTGGAGGTAATA
TACCTGCATTCGTTTTGGCATCCTTATCTGCTCTTGCCGGTGGTGTTGTT
GCAACTCTCAAGCTGCCACATCTTTCAAGCAATTCGTTCACGTCATCTGG
TTTTCATTTTGGCTAATGACCACTGAGACATTGTTTTGGTGATAAACCAA
TCTGTATATCATTAAACCATAGGAGCATTACTTGGTGATTTTCTTCCAGA
GCCCATCAGCCATCCCTTAAGGGACGACCAAGATAAGATCTTTTGGCTTA
ACACCCTGCGGAAATCAATGGTTCTACCATT
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