CF417379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417379 vs. ExPASy Swiss-Prot
Match: RNS2_ARATH (Ribonuclease 2 OS=Arabidopsis thaliana GN=RNS2 PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 8.969e-53 Identity = 93/154 (60.39%), Postives = 114/154 (74.03%), Query Frame = 2 Query: 2 QYWPSYRCGSTSTCYSGEGLFWAHEWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSLGVDDATAAIP 463 +YWPS CGS S+C G+G FW HEWEKHGTCS PV DEY+YF TTLNLY K+NVT VL +AGY+ SN+EKYPLGGIV+AIQNAFH TP++ C +DA++E+ +CFYKDFKPRDC+ + + S SCPKYVSLP Y L + +P Sbjct: 105 KYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRDAIDEIRICFYKDFKPRDCV-----GSQDLTSRKSCPKYVSLPEYTPLDGEAMVLKMP 253
BLAST of CF417379 vs. ExPASy Swiss-Prot
Match: RNOY_CRAGI (Ribonuclease Oy OS=Crassostrea gigas PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.811e-14 Identity = 43/143 (30.07%), Postives = 66/143 (46.15%), Query Frame = 2 Query: 2 QYWPSYRCGSTSTCYSGEGLFWAHEWEKHGTC--SFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDC-------SKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPK 403 +YWP+ + + FW HEW KHGTC S P +E YF L L+ KYN++R+L G LPS T Y + +A++ ++C K + E+ +C K+F+ C N S ++CP+ Sbjct: 71 KYWPNLYPDTKANS------FWEHEWSKHGTCATSLPATSNELKYFGMGLKLHAKYNISRILVNQGILPSKTAGYMINETEAAVKRELGVDAVIECVYDKEKTKKQLLYEISICLTKEFELISC-------NKKEVSETTCPR 200
BLAST of CF417379 vs. ExPASy Swiss-Prot
Match: RNS1_ARATH (Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13 Identity = 43/108 (39.81%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 8 WPSYRCGSTSTCYSGEGLFWAHEWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDA-----VNELHLC 316 WP+ C S S GE FW HEWEKHGTCS V+ D++ YF T LNL K N+ L +AG P + Y L I +I+ + TP ++C++D + +++LC Sbjct: 102 WPTLACPSGS----GEA-FWEHEWEKHGTCSESVI-DQHEYFQTALNLKQKTNLLGALTKAGINPDG-KSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLC 202
BLAST of CF417379 vs. ExPASy Swiss-Prot
Match: RNPB_PHYPO (Ribonuclease Phyb OS=Physarum polycephalum PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12 Identity = 44/136 (32.35%), Postives = 63/136 (46.32%), Query Frame = 2 Query: 2 QYWPSYRCGSTSTCYSGEGLFWAHEWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYV 409 Q WPS+ + S FW+HEW KHGTCS E+ +F+T L+LY +Y+V L+ G P ++ ++S I + P L+C + LC K+ + RDC DN S CP V Sbjct: 59 QVWPSFTGDNAS--------FWSHEWSKHGTCSGYA---EHDFFATVLSLYDQYDVKSALDNGGIEPGSS-SVSSDSLISVITDNIGGVPVLNCEGSTFASVGLCITKNLELRDC-------PDNMGSFWDCPAKV 175
BLAST of CF417379 vs. ExPASy Swiss-Prot
Match: RNLX_SOLLC (Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12 Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 8 WPSYRCGSTSTCYSGEGL-FWAHEWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDA-----VNELHLC 316 WPS C S+ +GL FW+HEW KHGTCS ++++YF T L+ K N+ + LN AG P N + Y + I AI+ TP ++C+ D+ + +++LC Sbjct: 100 WPSLACPSS------DGLKFWSHEWLKHGTCS---ALNQHAYFQTALDFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHTPFIECNVDSQGNHQLYQVYLC 199
BLAST of CF417379 vs. ExPASy Swiss-Prot
Match: RNLE_SOLLC (Extracellular ribonuclease LE OS=Solanum lycopersicum PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.235e-11 Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 2 Query: 2 QYWPSYRCGSTSTCYSGEG-LFWAHEWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKD 292 Q WP T C SG G FW+HEWEKHGTC+ V+ ++++YF L+L + ++ +L A P E Y L I +AI++A TP + C+ D Sbjct: 99 QNWP------TLACPSGSGSTFWSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHPDG-ESYDLVNIRNAIKSAIGYTPWIQCNVD 189
BLAST of CF417379 vs. ExPASy Swiss-Prot
Match: RNS1_PYRPY (Ribonuclease S-1 OS=Pyrus pyrifolia PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.979e-11 Identity = 42/124 (33.87%), Postives = 61/124 (49.19%), Query Frame = 2 Query: 62 FWAHEWEKHGTCSFPVVRDEYSYFSTTLNLYF--KYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHAT-PKLDCSKDA-----VNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYV 409 FW EW KHGTC +P ++D+ Y T + +Y K NV+ +L++A P+ T + PL I +AI+ + T PK C K+ + E+ LC +D K P S SCP V Sbjct: 108 FWEKEWIKHGTCGYPTIKDDMHYLQTVIRMYITQKQNVSAILSKAAIQPNGTNR-PLVDIENAIRRGTNNTKPKFKCQKNTRTTTELVEVTLCSDRDLKK----FINCPHGPPQGSRFSCPSSV 226
BLAST of CF417379 vs. ExPASy Swiss-Prot
Match: RNDI_DICDI (Ribonuclease DdI OS=Dictyostelium discoideum GN=ddiA PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 6.503e-11 Identity = 35/108 (32.41%), Postives = 53/108 (49.07%), Query Frame = 2 Query: 8 WPSYRCGSTSTCYSGEGLFWAHEWEKHGTCSFP-VVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKD 328 WPS +T FW HE+ KHGTCS + D + YF+T + LY ++N+T L PS++ Y I +AI F P + CS ++ + +C K+ Sbjct: 99 WPSLTGPNTD--------FWTHEFSKHGTCSITGPITDIHDYFATGIKLYTEFNITAALESENIYPSDSNTYKPVDITNAITTHFGGKPGIQCSSGQLSTVAVCIDKN 198 The following BLAST results are available for this feature:
BLAST of CF417379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417379 ID=CF417379; Name=CF417379; organism=Citrus sinensis; type=EST; length=613bpback to top |