CF417387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417387 vs. ExPASy Swiss-Prot
Match: FLA7_ARATH (Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana GN=FLA7 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.474e-34 Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = 2 Query: 227 FHTFLNYLESTKVLEXFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDXLKQLCLFHALPHYYSFADFKNLSQMSPVRTYAGG 487 FHTFL+YL ST V+E FQNQANNT+EGITIFVPKDDAFK+ K P L+NLT+D LKQL LFHALPHYYS ++FKNLSQ PV T+AGG Sbjct: 57 FHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGG 143 HSP 2 Score: 27.7202 bits (60), Expect = 1.474e-34 Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 184 EHVNLTDLLSVAGP 225 E+VNLT+LLSVAGP Sbjct: 43 ENVNLTELLSVAGP 56
BLAST of CF417387 vs. ExPASy Swiss-Prot
Match: FLA12_ARATH (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 4.669e-12 Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 224 RFHTFLNYLESTKVLEXFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDXLKQLCLFHALPHYYSFADFKNLSQMSPVRTYAG 484 +F F+ L+ST V Q NN+D GITIF P D +F LK +L +LT + +L FH +P Y S ++F+ +S +P+RT AG Sbjct: 49 QFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTIS--NPLRTQAG 133
BLAST of CF417387 vs. ExPASy Swiss-Prot
Match: FLA9_ARATH (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.358e-11 Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 224 RFHTFLNYLESTKVLEXFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDXLKQLCLFHALPHYYSFADFKNLSQMSPVRTYAGG 487 +F TF++ L T+V Q N++ EG+T+F P D+AF++LK +L L+ D +L L+H P YYS D LS +PVRT A G Sbjct: 49 QFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDL--LSVSNPVRTQASG 134
BLAST of CF417387 vs. ExPASy Swiss-Prot
Match: FLA6_ARATH (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 5.162e-11 Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 2 Query: 224 RFHTFLNYLESTKVLEXFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDXLKQLCLFHALPHYYSFADFKNLSQMSPVRTYAGG 487 +F T + L +T+V Q N++D+G+TIF P D+AF LK +L +LT QL L+H +P YYS +D L +PVRT A G Sbjct: 48 QFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDL--LLASNPVRTQATG 133 The following BLAST results are available for this feature:
BLAST of CF417387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417387 ID=CF417387; Name=CF417387; organism=Citrus sinensis; type=EST; length=492bpback to top |