CF417393

Overview
NameCF417393
Unique NameCF417393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417393 vs. ExPASy Swiss-Prot
Match: FKB42_ARATH (42 kDa peptidyl-prolyl isomerase OS=Arabidopsis thaliana GN=FKBP42 PE=1 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.302e-99
Identity = 180/235 (76.60%), Postives = 205/235 (87.23%), Query Frame = 1
Query:    1 QQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIGRGASFAR*T*KSCIQEAKGDL*GIF 705
            QQP+E+VLGKEKKE+ GLAIGV+SMK+GE AL+HVGWEL YGKEG+FSFPNV PMADL+YEV +IGFDETKEGKARSDMTVEERIGAADRRKMDGN+LFKEEKLEEAMQQYEMAIAYMGDDFMFQL+GKY+DMALAVKNPCHLN AACL+KLKRY+EAIG C++VL E+E N KALFRRGKA+AELGQ D+AR+DF KA K+AP+DK+I R         K+  Q+ K    GIF
Sbjct:   92 QQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIF 326          
BLAST of CF417393 vs. ExPASy Swiss-Prot
Match: FKB70_WHEAT (70 kDa peptidyl-prolyl isomerase OS=Triticum aestivum GN=FKBP70 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25
Identity = 78/209 (37.32%), Postives = 111/209 (53.11%), Query Frame = 1
Query:    1 QQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSI 627
            Q+P E    +E   + GL   V +MK GE AL+ +  E  YG   S     V P + ++YEV L+ F + KE     D+   E+I AA  +K +GNALFK  K   A ++YE A  ++  D  F    K +   L +   C+LN AAC LKLK Y++A   C+ VL  D  NVKAL+RR +A  +L   + A  D  KA +  PE++ +
Sbjct:  318 QEPFEFKTDEEAV-IEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVKDKESW---DLNNSEKIEAAGTKKEEGNALFKSGKYARASKRYEKAAKFIEYDTSFSEDEKKQSKQLKIT--CNLNNAACKLKLKDYKQAEKLCTKVLELDSRNVKALYRRAQAYTQLADLELAEVDIKKALEIDPENRDV 520          
BLAST of CF417393 vs. ExPASy Swiss-Prot
Match: FKB70_ARATH (70 kDa peptidyl-prolyl isomerase OS=Arabidopsis thaliana GN=ROF1 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.772e-25
Identity = 75/200 (37.50%), Postives = 110/200 (55.00%), Query Frame = 1
Query:   31 EKKEMTGLAIGVSSMKAGEHALLHVGWELGYGK-EGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSI 627
            E++ + GL   V  MK GE AL+ +  E  +G  E       V P + + YEV L+ FD+ +E     DM  EE+I AA ++K +GN+ FK  K   A ++YE A+ ++  D  F    + +  A A+K  C+LN AAC LKLK Y++A   C+ VL  +  NVKAL+RR +A  EL   D A  D  KA +  P ++ +
Sbjct:  325 EEQVVDGLDRAVMKMKKGEVALVTIDPEYAFGSNESQQELAVVPPNSTVTYEVDLLTFDKERESW---DMNTEEKIEAASKKKEEGNSKFKGGKYSLASKRYEKAVKFIEYDTSFS--EEEKKQAKALKVACNLNDAACKLKLKDYKQAEKLCTKVLELESTNVKALYRRAQAYMELSDLDLAEFDVKKALEIDPNNREV 519          
BLAST of CF417393 vs. ExPASy Swiss-Prot
Match: FKBP4_RABIT (FK506-binding protein 4 OS=Oryctolagus cuniculus GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.090e-21
Identity = 64/192 (33.33%), Postives = 101/192 (52.60%), Query Frame = 1
Query:   49 GLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 624
            GL   +  M+ GEH++L++     +G  G   F  + P A+L YEV L  F++ KE     +M+ EE++  +   K  G   FKE K ++A+ QY+  ++++  +  F    +    A A++   HLN A C LKL+ +  A+  C+  L  D NN K LFRRG+A   +   D AR DF K  +  P +K+
Sbjct:  203 GLEKAIQRMEKGEHSILYLKPSYAFGNAGKEKF-QIPPYAELKYEVHLKSFEKAKESW---EMSSEEKLEQSAIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFS--SEEVQKAQALRLASHLNLAMCHLKLQAFSAAVESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADFQKVLQLYPSNKA 388          
BLAST of CF417393 vs. ExPASy Swiss-Prot
Match: FKBP4_MOUSE (FK506-binding protein 4 OS=Mus musculus GN=Fkbp4 PE=1 SV=5)

HSP 1 Score: 102.834 bits (255), Expect = 1.859e-21
Identity = 64/192 (33.33%), Postives = 102/192 (53.12%), Query Frame = 1
Query:   49 GLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 624
            GL   +  M+ GEH+++++     +G  G   F  + P A+L YEV L  F++ KE     +M+  E++  ++  K  G A FKE K ++A+ QY+  ++++  +  F   G+      A++   HLN A C LKL+ +  AI  C+  L  D NN K LFRRG+A   +   D AR DF K  +  P +K+
Sbjct:  203 GLEEAIQRMEKGEHSIVYLKPSYAFGSVGKERF-QIPPHAELRYEVRLKSFEKAKESW---EMSSAEKLEQSNIVKERGTAYFKEGKYKQALLQYKKIVSWLEYESSFS--GEEMQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADFQKVLQLYPSNKA 388          
BLAST of CF417393 vs. ExPASy Swiss-Prot
Match: FKBP4_BOVIN (FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=1 SV=4)

HSP 1 Score: 102.834 bits (255), Expect = 1.859e-21
Identity = 63/192 (32.81%), Postives = 102/192 (53.12%), Query Frame = 1
Query:   49 GLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 624
            GL   +  M+ GEH+++++     +G  G   F  + P A+L YE+ L  F++ KE     +M+ EE++  +   K  G   FKE K ++A+ QY+  ++++  +  F    +  + A A++   HLN A C LKL+ +  AI  C+  L  D NN K LFRRG+A   +   D AR DF K  +  P +K+
Sbjct:  203 GLEKAIQRMEKGEHSIVYLKPRYAFGSAGKEKF-QIPPNAELKYEIHLKSFEKAKESW---EMSSEEKLEQSTIVKERGTVYFKEGKYKQAVLQYKKIVSWLEYESSFS--DEDAEKAQALRLASHLNLAMCHLKLQAFSAAIENCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADFQKVLQLYPSNKA 388          
BLAST of CF417393 vs. ExPASy Swiss-Prot
Match: FKBP4_RAT (FK506-binding protein 4 OS=Rattus norvegicus GN=Fkbp4 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21
Identity = 64/192 (33.33%), Postives = 101/192 (52.60%), Query Frame = 1
Query:   49 GLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 624
            GL   +  M+ GEH+++++     +G  G   F  + P A+L YEV L  F++ K   A  +M  EE++  ++  K  G   FKE K ++A+ QY+  ++++  +  F   G+      A++   HLN A C LKL+ +  AI  C+  L  D NN K LFRRG+A   +   D AR DF K  +  P +K+
Sbjct:  203 GLEEAIQRMEKGEHSIVYLKPSYAFGSVGKERF-QIPPHAELRYEVHLKSFEKAK---ASWEMNSEEKLEQSNIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFS--GEEMQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADFQKVLQLYPSNKA 388          
BLAST of CF417393 vs. ExPASy Swiss-Prot
Match: FKBP4_HUMAN (FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20
Identity = 62/192 (32.29%), Postives = 100/192 (52.08%), Query Frame = 1
Query:   49 GLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 624
            GL   +  M+ GEH+++++     +G  G   F  + P A+L YE+ L  F++ KE     +M  EE++  +   K  G   FKE K ++A+ QY+  ++++  +  F    +    A A++   HLN A C LKL+ +  AI  C+  L  D NN K LFRRG+A   +   + AR DF K  +  P +K+
Sbjct:  203 GLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKF-QIPPNAELKYELHLKSFEKAKESW---EMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFS--NEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKA 388          
BLAST of CF417393 vs. ExPASy Swiss-Prot
Match: FKBP5_SAGOE (FK506-binding protein 5 OS=Saguinus oedipus GN=FKBP5 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.969e-19
Identity = 60/200 (30.00%), Postives = 104/200 (52.00%), Query Frame = 1
Query:   25 GKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 624
            G++     G+   +  M+  E  +LH+G   G+G+ G   F  + P A+L+YEV L  F++ KE     +M  +E++  A   K +G   FK  K  +A+ QY   ++++  +  + L  K    + +      LN A C LKL+ Y +A+  C   LG D  N K L+RRG+A+  + + ++A+ DF K  +  P++K+
Sbjct:  193 GEDHDIPIGIDKALEKMQREEQCILHLGPRYGFGEAGKPKF-GIEPNAELIYEVTLKSFEKAKESW---EMDTKEKLEQAAIVKEEGTVYFKGGKYVQAVIQYGKIVSWL--EMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYAKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKA 386          
BLAST of CF417393 vs. ExPASy Swiss-Prot
Match: FKBP5_SAIBB (FK506-binding protein 5 OS=Saimiri boliviensis boliviensis GN=FKBP5 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.614e-19
Identity = 60/200 (30.00%), Postives = 103/200 (51.50%), Query Frame = 1
Query:   25 GKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 624
            G++     G+   +  M+  E  +LH+G   G+G+ G   F  + P A+L+YEV L  F++ KE     +M  +E++  A   K  G   FK  K  +A+ QY   ++++  +  + L  K    + +      LN A C LKL+ Y +A+  C   LG D  N K L+RRG+A+  + + ++A+ DF K  +  P++K+
Sbjct:  193 GEDHDIPIGIDKALEKMQREEQCILHLGPRYGFGEAGKPKF-GIEPNAELIYEVTLKSFEKAKESW---EMDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWL--EMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKA 386          
The following BLAST results are available for this feature:
BLAST of CF417393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
FKB42_ARATH1.302e-9976.6042 kDa peptidyl-prolyl isomerase OS=Arabidopsis th... [more]
FKB70_WHEAT1.244e-2537.3270 kDa peptidyl-prolyl isomerase OS=Triticum aesti... [more]
FKB70_ARATH2.772e-2537.5070 kDa peptidyl-prolyl isomerase OS=Arabidopsis th... [more]
FKBP4_RABIT1.090e-2133.33FK506-binding protein 4 OS=Oryctolagus cuniculus G... [more]
FKBP4_MOUSE1.859e-2133.33FK506-binding protein 4 OS=Mus musculus GN=Fkbp4 P... [more]
FKBP4_BOVIN1.859e-2132.81FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=... [more]
FKBP4_RAT2.429e-2133.33FK506-binding protein 4 OS=Rattus norvegicus GN=Fk... [more]
FKBP4_HUMAN1.205e-2032.29FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 P... [more]
FKBP5_SAGOE2.969e-1930.00FK506-binding protein 5 OS=Saguinus oedipus GN=FKB... [more]
FKBP5_SAIBB6.614e-1930.00FK506-binding protein 5 OS=Saimiri boliviensis bol... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-323 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417393 ID=CF417393; Name=CF417393; organism=Citrus sinensis; type=EST; length=709bp
CAACAACCGCTTGAAATGGTTTTAGGAAAAGAGAAAAAAGAGATGACTGG
CTTGGCTATTGGGGTGTCCAGCATGAAGGCTGGTGAACATGCACTGTTAC
ATGTGGGCTGGGAATTGGGTTATGGGAAAGAAGGAAGCTTTTCTTTCCCA
AATGTGTCTCCCATGGCAGACTTAGTATATGAGGTTGTGCTCATTGGCTT
TGACGAAACCAAAGAAGGGAAAGCTCGTAGTGACATGACTGTCGAAGAAA
GGATTGGTGCAGCAGACCGAAGAAAGATGGATGGAAATGCCTTATTTAAG
GAGGAAAAACTGGAAGAGGCCATGCAACAGTATGAAATGGCCATAGCTTA
TATGGGCGACGACTTCATGTTCCAGTTGTTTGGGAAGTACCGGGATATGG
CTTTGGCTGTTAAGAATCCATGCCATCTTAACACGGCAGCATGTCTATTA
AAGCTCAAACGTTATGAAGAAGCCATCGGGCAATGCAGCCTTGTATTGGG
AGAGGATGAAAATAATGTGAAGGCCCTTTTCAGACGAGGAAAGGCTAGAG
CAGAACTTGGGCAAACAGATGCTGCCCGGGAAGACTTTCTAAAGGCAGGT
AAATTTGCACCTGAAGACAAATCAATTGGACGGGGAGCTTCGTTTGCTCG
CTGAACATGAAAAAGCTGTATACAAGAAGCAAAAGGAGATCTATAAGGAA
TTTTTGGAC
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