CF417417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417417 vs. ExPASy Swiss-Prot
Match: NDUA9_RAT (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (Fragment) OS=Rattus norvegicus GN=Ndufa9 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.991e-16 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 184 GRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQ 351 GRSSVSG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+LMGDLGQ Sbjct: 40 GRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDIYDTMHLRLMGDLGQ 95
BLAST of CF417417 vs. ExPASy Swiss-Prot
Match: NDUA9_PANTR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pan troglodytes GN=NDUFA9 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.743e-15 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 184 GRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQ 351 GRSSVSGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ Sbjct: 47 GRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQ 102
BLAST of CF417417 vs. ExPASy Swiss-Prot
Match: NDUA9_HUMAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Homo sapiens GN=NDUFA9 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.743e-15 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 184 GRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQ 351 GRSSVSGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ Sbjct: 47 GRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQ 102
BLAST of CF417417 vs. ExPASy Swiss-Prot
Match: NDUA9_GORGO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFA9 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.743e-15 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 184 GRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQ 351 GRSSVSGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ Sbjct: 47 GRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQ 102
BLAST of CF417417 vs. ExPASy Swiss-Prot
Match: NDUA9_PONPY (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pongo pygmaeus GN=NDUFA9 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.973e-15 Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 1 Query: 184 GRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQ 351 GRSSVSGI+ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQ Sbjct: 47 GRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQ 102
BLAST of CF417417 vs. ExPASy Swiss-Prot
Match: NDUA9_PONAB (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pongo abelii GN=NDUFA9 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.973e-15 Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 1 Query: 184 GRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQ 351 GRSSVSGI+ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQ Sbjct: 47 GRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQ 102
BLAST of CF417417 vs. ExPASy Swiss-Prot
Match: NDUA9_MOUSE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Mus musculus GN=Ndufa9 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.072e-15 Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 1 Query: 184 GRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQ 351 GRSSVSG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+LMGD GQ Sbjct: 47 GRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDPGQ 102
BLAST of CF417417 vs. ExPASy Swiss-Prot
Match: NDUA9_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Bos taurus GN=NDUFA9 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.072e-15 Identity = 40/56 (71.43%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 184 GRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQ 351 GRSSVSGI+ATVFG TGFLGRYVV L +MGSQV+VP R D HL+ MGDLGQ Sbjct: 47 GRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDLGQ 102
BLAST of CF417417 vs. ExPASy Swiss-Prot
Match: NDUA9_NEUCR (NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial OS=Neurospora crassa GN=nuo-40 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.952e-12 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 1 Query: 115 IGDLDLLRSPLPVPATLFVRALVGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQ 351 I D+ + R+ P+ +R GRSS+ G ATVFG TG LGRY+V +LA+ G V++PFR E + RHLK+ GDLG+ Sbjct: 27 ISDVTITRTGKPI-----IRNQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVIPFRD-EYNKRHLKVTGDLGK 99
BLAST of CF417417 vs. ExPASy Swiss-Prot
Match: NDUA9_DICDI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Dictyostelium discoideum GN=ndufa9 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.402e-11 Identity = 33/56 (58.93%), Postives = 45/56 (80.36%), Query Frame = 1 Query: 187 RSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMGDLGQ 351 R+ +G++ATVFG TGF GRY+VQ LA+ G QV+VP+R CED+ R LK++G+LGQ Sbjct: 34 RTQTTGLVATVFGATGFTGRYLVQLLARTGIQVVVPYR-CEDEGFRDLKVLGELGQ 88 The following BLAST results are available for this feature:
BLAST of CF417417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417417 ID=CF417417; Name=CF417417; organism=Citrus sinensis; type=EST; length=352bpback to top |