CF417424

Overview
NameCF417424
Unique NameCF417424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7136 contig Csv1_Contig7136:44..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417424 vs. ExPASy Swiss-Prot
Match: MT878_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana GN=At5g38780 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.535e-32
Identity = 71/159 (44.65%), Postives = 96/159 (60.38%), Query Frame = 3
Query:    3 IELKLLQADHQNP--STIEFQVFFNDHPENDFNTLFKALPHSPK--YFAAGVPGFFQNRLFPKSTLHIINSSYALHWLSKIPKEIAGGNSLAWNRESIRNKRFVNEVAEAYSAQFKNDIESFLNARAHELVAGRLDVHSYSCC-------TRWDSIVSD 446
            ++LK L+   ++   + +EFQV+FND P NDFNTLF+  P S K  YF+ GVPG F  R+ P++++HI N+S+  HWLSK+P+E+   NSLAWN+  I     + EV EAY  QF+ D+  FL ARA ELV G L +    C          W  IV D
Sbjct:   81 VKLKHLKESQEDSRVAPLEFQVYFNDLPNNDFNTLFRTQPPSSKQEYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNKNYIHCNNLIEEVTEAYKVQFEKDMGVFLKARAEELVPGGLMITLGQCLPDGVAMYETWSGIVKD 239          
BLAST of CF417424 vs. ExPASy Swiss-Prot
Match: MT810_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana GN=At5g38100 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.684e-30
Identity = 65/141 (46.10%), Postives = 90/141 (63.83%), Query Frame = 3
Query:    3 IELKLLQADHQNPST-IEFQVFFNDHPENDFNTLFKALPHSPK--YFAAGVPGFFQNRLFPKSTLHIINSSYALHWLSKIPKEIAGGNSLAWNRESIRNKRFVNEVAEAYSAQFKNDIESFLNARAHELVAGRLDVHSYSC 416
            ++ K L+   +N    +EFQVFFND P NDFNTLF+  P SP+  YF+ GVPG F  R+ P++++HI ++SY  HWLSK+P  +    S+AWN+  I+    + EV +AY  QF  D+E FL+ARA ELV G L +    C
Sbjct:   80 VKSKRLEESTENSLVPLEFQVFFNDQPTNDFNTLFRTQPLSPEREYFSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQCNNLLEEVTKAYKVQFIKDMEIFLDARAEELVPGGLMIVIGEC 220          
BLAST of CF417424 vs. ExPASy Swiss-Prot
Match: MT797_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana GN=At5g37970 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.685e-29
Identity = 64/142 (45.07%), Postives = 84/142 (59.15%), Query Frame = 3
Query:   48 IEFQVFFNDHPENDFNTLFKALPHSPK--YFAAGVPGFFQNRLFPKSTLHIINSSYALHWLSKIPKEIAGGNSLAWNRESIRNKRFVNEVAEAYSAQFKNDIESFLNARAHELVAGRLDVHSYSC-------CTRWDSIVSD 446
            +EFQV FND P NDFNTLF+  P   +  YF+ GVPG F  R+ PK++LHI ++SY LHWLS +P+ +    S A N+  I+    V+EV +AY  QF+ D   FL ARA ELV+G L + S  C          W  +V D
Sbjct:   99 LEFQVCFNDQPNNDFNTLFRTQPFFSRKEYFSVGVPGSFHGRVLPKNSLHIGHTSYTLHWLSNVPQHVCDKKSPALNKSYIQCNNLVDEVTKAYKIQFRKDFGGFLEARAEELVSGGLMILSGQCLPDGIPKALTWQGVVID 240          

HSP 2 Score: 23.8682 bits (50), Expect = 7.685e-29
Identity = 17/58 (29.31%), Postives = 28/58 (48.28%), Query Frame = 2
Query:  521 KKSIPSTSLITAQP-LRSWXSIIKTNKYFTIERMEQLADRMSQSTFLAKCRTSAVRAV 691
            K+ I   SL T  P +  + + I+ N+ F +E ME+++  M          TS  RA+
Sbjct:  257 KEKIELFSLPTYIPHISEFKANIEQNENFNVETMEEISHPMDYMPLTNDFITSMFRAI 314          
BLAST of CF417424 vs. ExPASy Swiss-Prot
Match: MT799_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 67/142 (47.18%), Postives = 84/142 (59.15%), Query Frame = 3
Query:   48 IEFQVFFNDHPENDFNTLFKALPHSPK--YFAAGVPGFFQNRLFPKSTLHIINSSYALHWLSKIPKEIAGGNSLAWNRESIRNKRFVNEVAEAYSAQFKNDIESFLNARAHELVAGRLDVHSYSC-------CTRWDSIVSD 446
            +EFQV FND P NDFNTLF+  P S K  Y + GVPG F  R+ PK++LHI + +YALHWLS +P+ +    S A N+  I+    V EV EAY  QFK D+  FL ARA ELV+G L + S  C          W  +V D
Sbjct:   99 LEFQVCFNDQPNNDFNTLFRTQPISSKQAYLSVGVPGSFHGRVLPKNSLHIGHITYALHWLSTVPQHVCDKKSPALNKSYIQCNNLVEEVTEAYRVQFKKDMGDFLGARAEELVSGGLMILSGQCLPDGVPKALTWQGVVID 240          
BLAST of CF417424 vs. ExPASy Swiss-Prot
Match: BAMT_ANTMA (Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.572e-22
Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 3
Query:   51 EFQVFFNDHPENDFNTLFKALPH-SPKYFAAGVPGFFQNRLFPKSTLHIINSSYALHWLSKIPKEIAGGNSLAWNRESI-RNKRFVNEVAEAYSAQFKNDIESFLNARAHELVAG 389
            EF+VF ND P+NDFN LFK L H +   F  G+PG F  RL PK +LH   SSY++HWLS++P+ +        NR++I        EV +AY+ Q++ D  +FL  R  E+V G
Sbjct:   94 EFEVFLNDLPDNDFNNLFKLLSHENGNCFVYGLPGSFYGRLLPKKSLHFAYSSYSIHWLSQVPEGLEDN-----NRQNIYMATESPPEVYKAYAKQYERDFSTFLKLRGEEIVPG 203          

HSP 2 Score: 30.0314 bits (66), Expect = 9.572e-22
Identity = 15/47 (31.91%), Postives = 25/47 (53.19%), Query Frame = 1
Query:  433 PLSQTTLGVFYDVFGSCLMDMAKMGITSEEKINSFNIPNHRPTPKEL 573
            P S+  L +F  +    L+DM   G+   + + SFNIP + P  +E+
Sbjct:  218 PSSKDDLAIF-TLLAKTLVDMVAEGLVKMDDLYSFNIPIYSPCTREV 263          
BLAST of CF417424 vs. ExPASy Swiss-Prot
Match: JMT_ARATH (Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.705e-17
Identity = 49/163 (30.06%), Postives = 78/163 (47.85%), Query Frame = 3
Query:   51 EFQVFFNDHPENDFNTLFKALPH------------------SPKYFAAGVPGFFQNRLFPKSTLHIINSSYALHWLSKIPKEIA--GGNSLAWNRESIRNKRFVNEVA-----EAYSAQFKNDIESFLNARAHELVAG-----------RLDVHSYSCCTRWD 431
            E +V  ND P NDFN +  +LP                       F + VPG F  RLFP+ +LH ++SS +LHWLS++P   A     ++  + E++  K ++++ +     +AY+ QF+ D   FL +R+ ELV G            LD  +   C +W+
Sbjct:   90 ELRVSLNDLPSNDFNYICASLPEFYDRVNNNKEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCREAEKEDRTITADLENM-GKIYISKTSPKSAHKAYALQFQTDFLVFLRSRSEELVPGGRMVLSFLGRRSLDPTTEESCYQWE 251          

HSP 2 Score: 36.1946 bits (82), Expect = 7.705e-17
Identity = 16/37 (43.24%), Postives = 24/37 (64.86%), Query Frame = 1
Query:  463 YDVFGSCLMDMAKMGITSEEKINSFNIPNHRPTPKEL 573
            +++    LM MAK GI  EEKI++FN P +  + +EL
Sbjct:  250 WELLAQALMSMAKEGIIEEEKIDAFNAPYYAASSEEL 286          
BLAST of CF417424 vs. ExPASy Swiss-Prot
Match: JMT_BRARP (Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.302e-16
Identity = 50/168 (29.76%), Postives = 79/168 (47.02%), Query Frame = 3
Query:   51 EFQVFFNDHPENDFNTLFKALPH---------------------SPKYFAAGVPGFFQNRLFPKSTLHIINSSYALHWLSKIP-KEIAGGNSLAWNRE-SIRNKRFVNEVA-----EAYSAQFKNDIESFLNARAHELVAGRLDVHSYSCCTRWDSIVSD--YSWCIL 464
            E  +  ND P NDFN +F +LP                          F + VPG F  RLFP+ +LH ++SS +LHWLS++P  E+   + +    +   R K ++++ +     + Y+ QF+ D   FL +R+ ELV G   V S+   +  D    +  Y W +L
Sbjct:   90 ELSLSLNDLPSNDFNYIFASLPEFYDRVKKRDNNYESLGFEHGSGGPCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCGEVNKKDGVVITADLDNRGKIYLSKTSPKSAHKVYALQFQTDFSVFLRSRSEELVPGGRMVLSFLGRSSPDPTTEESCYQWELL 257          

HSP 2 Score: 36.1946 bits (82), Expect = 1.302e-16
Identity = 15/37 (40.54%), Postives = 24/37 (64.86%), Query Frame = 1
Query:  463 YDVFGSCLMDMAKMGITSEEKINSFNIPNHRPTPKEL 573
            +++    LM +AK GI  EE I++FN P +  +P+EL
Sbjct:  254 WELLAQALMSLAKEGIIEEENIDAFNAPYYAASPEEL 290          
The following BLAST results are available for this feature:
BLAST of CF417424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MT878_ARATH6.535e-3244.65Probable S-adenosylmethionine-dependent methyltran... [more]
MT810_ARATH4.684e-3046.10Probable S-adenosylmethionine-dependent methyltran... [more]
MT797_ARATH7.685e-2945.07Probable S-adenosylmethionine-dependent methyltran... [more]
MT799_ARATH1.507e-2847.18Probable S-adenosylmethionine-dependent methyltran... [more]
BAMT_ANTMA9.572e-2243.48Benzoate carboxyl methyltransferase OS=Antirrhinum... [more]
JMT_ARATH7.705e-1730.06Jasmonate O-methyltransferase OS=Arabidopsis thali... [more]
JMT_BRARP1.302e-1629.76Jasmonate O-methyltransferase OS=Brassica rapa sub... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-354 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417424 ID=CF417424; Name=CF417424; organism=Citrus sinensis; type=EST; length=695bp
CTATAGAGCTGAAACTCTTACAAGCTGATCACCAAAACCCTTCAACTATA
GAATTCCAAGTGTTCTTCAATGATCATCCCGAGAATGACTTTAACACACT
CTTTAAAGCCCTTCCACATTCACCAAAATATTTTGCTGCCGGTGTGCCGG
GTTTTTTCCAGAATCGCTTGTTTCCCAAGTCAACTTTACATATTATAAAC
TCATCCTATGCCCTGCATTGGCTCTCCAAGATTCCGAAAGAAATAGCGGG
CGGAAATTCACTGGCCTGGAATAGAGAAAGTATTCGGAATAAAAGATTTG
TAAATGAAGTAGCGGAAGCGTATTCAGCTCAGTTCAAGAATGACATCGAG
TCATTTCTGAACGCTAGAGCACATGAACTAGTGGCTGGGAGGCTTGATGT
TCATTCTTATAGTTGCTGTACCCGATGGGATTCCATTGTCTCAGACTACT
CTTGGTGTATTTTATGATGTTTTTGGATCTTGCCTCATGGACATGGCTAA
AATGGGAATAACCAGCGAAGAAAAAATCAATTCCTTCAACATCCCTAATC
ACCGCCCAACCCCTAAGGAGCTGGNAGTCAATAATCAAAACAAATAAATA
TTTCACAATTGAGAGAATGGAGCAACTGGCTGATCGTATGTCGCAATCAA
CATTCCTCGCTAAATGTCGCACTTCAGCAGTAAGAGCTGTATATG
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