CF417432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417432 vs. ExPASy Swiss-Prot
Match: CP058_HUMAN (UPF0420 protein C16orf58 OS=Homo sapiens GN=C16orf58 PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 1.761e-31 Identity = 66/144 (45.83%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 152 SVTPDYVPFQVWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVLFTFYQGSNLDSNAKMWRLVAXXXXXXXXXXXXXSPLFPSAFAFVVCLGSLSRSFTGVASGATRAALTQHFALQNNAADIS 583 SV+PDY+P+Q+WDS+Q ++ + L+TQA+L IGVG ATV AT W ++D TGMLG ++F +++GS LD NAK WRL A +P++P F V +L++ VA GATRAALT H A +NN AD+S Sbjct: 85 SVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGATRAALTVHQARRNNMADVS 228
BLAST of CF417432 vs. ExPASy Swiss-Prot
Match: CP058_PONAB (UPF0420 protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.300e-31 Identity = 66/144 (45.83%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 152 SVTPDYVPFQVWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVLFTFYQGSNLDSNAKMWRLVAXXXXXXXXXXXXXSPLFPSAFAFVVCLGSLSRSFTGVASGATRAALTQHFALQNNAADIS 583 SV+PDY+P+Q+WDS+Q ++ + L+TQA+L IGVG ATV AT W ++D TGMLG ++F +++GS LD NAK WRL A +P++P F V +L++ VA GATRAALT H A +NN AD+S Sbjct: 85 SVSPDYLPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGATRAALTVHQARRNNMADVS 228
BLAST of CF417432 vs. ExPASy Swiss-Prot
Match: CP058_MOUSE (UPF0420 protein C16orf58 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.005e-31 Identity = 64/144 (44.44%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 152 SVTPDYVPFQVWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVLFTFYQGSNLDSNAKMWRLVAXXXXXXXXXXXXXSPLFPSAFAFVVCLGSLSRSFTGVASGATRAALTQHFALQNNAADIS 583 SV+PDY+P+Q+WDS+Q ++ + L+TQA+L +GVG A+V AT W ++D TGMLG ++ +++GS LD NAK WRL A +P++P F V +L++ GVA GATRAALT H A +NN AD+S Sbjct: 83 SVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLVKDSTGMLGRIILAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPMYPIFFTMTVSTSNLAKCIVGVAGGATRAALTMHQARRNNMADVS 226
BLAST of CF417432 vs. ExPASy Swiss-Prot
Match: CP058_RAT (UPF0420 protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.125e-31 Identity = 64/144 (44.44%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 152 SVTPDYVPFQVWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVLFTFYQGSNLDSNAKMWRLVAXXXXXXXXXXXXXSPLFPSAFAFVVCLGSLSRSFTGVASGATRAALTQHFALQNNAADIS 583 SV+PDY+ +Q+WDS+Q ++ + L+TQA+L +GVG A+V AT W ++D TGMLG ++F +++GS LD NAK WRL A +P++P F V +L++ GVA GATRAALT H A +NN AD+S Sbjct: 83 SVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLVKDSTGMLGRIIFAWWKGSKLDCNAKQWRLFADILNDTAMFLEIMAPMYPIFFTMTVSTSNLAKCIVGVAGGATRAALTMHQARRNNMADVS 226
BLAST of CF417432 vs. ExPASy Swiss-Prot
Match: U420_DICDI (UPF0420 protein OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.665e-30 Identity = 66/145 (45.52%), Postives = 92/145 (63.45%), Query Frame = 2 Query: 152 SVTPDYVPFQVWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVLFTFYQGSNLDSNAKMWRLVAXXXXXXXXXXXXXSPLFPS-AFAFVVCLGSLSRSFTGVASGATRAALTQHFALQNNAADIS 583 SVT DY +Q WDS+Q L + I L+T+A+L GVG+ SATV AT QW +RD GM+G ++F + +G++LD N+K WR A SPLF S F + C+G +++S GVA G T+A+LTQHFA ++N AD+S Sbjct: 71 SVTTDYFGYQFWDSIQALCSTITGTLATRAILKGYGVGDSSATVASATTQWLIRDGMGMIGRIVFAWRKGTDLDCNSKKWRYTADILNNIGMAFEMISPLFSSQLFLPLSCIGLIAKSICGVAGGCTKASLTQHFAKRDNLADVS 215 The following BLAST results are available for this feature:
BLAST of CF417432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417432 ID=CF417432; Name=CF417432; organism=Citrus sinensis; type=EST; length=585bpback to top |