CF417441

Overview
NameCF417441
Unique NameCF417441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9742 contig Csv1_Contig9742:435..1114. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417441 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.069e-55
Identity = 118/227 (51.98%), Postives = 140/227 (61.67%), Query Frame = 3
Query:    3 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGMGV*LCSLECPVRMQCS*PSQSMYLTKEPSKELSSGTTNRGLICPLSLICT*TSNWXLEKFITHRIPFSEINKAFEYM 683
            + HF+GTSTFSEYTVVH GC+AKINP APLDKVC+LSCG+STGLGATLNVAKP++                              VD  S RFEEAKKFGVT+FVN   H++P+QEVIAE+TN GVDRS+ECTG+ + MISAFECVHDG GV    +  P +          +L +   K    G        P  +         LEKFITH++PFSEINKAFEYM
Sbjct:  141 IYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGISTGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKKFGVTEFVNPKAHEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGV-AVLVGVPHKDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFSEINKAFEYM 366          
BLAST of CF417441 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.069e-55
Identity = 120/227 (52.86%), Postives = 139/227 (61.23%), Query Frame = 3
Query:    3 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGMGV*LCSLECPVRMQCS*PSQSMYLTKEPSKELSSGTTNRGLICPLSLICT*TSNWXLEKFITHRIPFSEINKAFEYM 683
            V+HF+GTSTFSEYTVVH+GCVAKINP APLDKVCILSCG+ TGLGAT+NVAKP+                               VD  S RFE AKKFGV +FVN  EHD+P+Q+VIAEMTNGGVDR+VECTG+I  MISAFECVHDG GV    +  P +          +L +   K    G        P  +         LEKFITH +PFSEINKAF+YM
Sbjct:  141 VHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKEHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGV-AVLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYM 366          
BLAST of CF417441 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.397e-55
Identity = 122/235 (51.91%), Postives = 145/235 (61.70%), Query Frame = 3
Query:    3 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGMGV*LCSLECPVRMQCS*PSQSMYLTKEPSKELSSGT---TNRGLICPLSLICT*TSNWX-----LEKFITHRIPFSEINKAFEYM 683
            + HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+STGLGATLNVAKP +                              VD ++ RFE+AKKFGVT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDG GV          +    P +       P   L+  T   T  G   P S I +    +      LEKFITH +PF+EINKAF+ M
Sbjct:  141 IYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGV---------AVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLM 366          
BLAST of CF417441 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.397e-55
Identity = 122/235 (51.91%), Postives = 145/235 (61.70%), Query Frame = 3
Query:    3 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGMGV*LCSLECPVRMQCS*PSQSMYLTKEPSKELSSGT---TNRGLICPLSLICT*TSNWX-----LEKFITHRIPFSEINKAFEYM 683
            + HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+STGLGATLNVAKP +                              VD ++ RFE+AKKFGVT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDG GV          +    P +       P   L+  T   T  G   P S I +    +      LEKFITH +PF+EINKAF+ M
Sbjct:  141 IYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGV---------AVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLM 366          
BLAST of CF417441 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.397e-55
Identity = 122/235 (51.91%), Postives = 145/235 (61.70%), Query Frame = 3
Query:    3 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGMGV*LCSLECPVRMQCS*PSQSMYLTKEPSKELSSGT---TNRGLICPLSLICT*TSNWX-----LEKFITHRIPFSEINKAFEYM 683
            + HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+STGLGATLNVAKP +                              VD ++ RFE+AKKFGVT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDG GV          +    P +       P   L+  T   T  G   P S I +    +      LEKFITH +PF+EINKAF+ M
Sbjct:  141 IYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGV---------AVLVGVPHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLM 366          
BLAST of CF417441 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 5.308e-55
Identity = 117/227 (51.54%), Postives = 141/227 (62.11%), Query Frame = 3
Query:    3 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGMGV*LCSLECPVRMQCS*PSQSMYLTKEPSKELSSGTTNRGLICPLSLICT*TSNWXLEKFITHRIPFSEINKAFEYM 683
            + HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+STGLGA+LNVAKP +                              VD ++ RFE+AKKFGVT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDG GV    +  P +          +L +   K    G        P  +         LEKFITH +PF+EINKAF+ M
Sbjct:  141 IYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGASLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGV-AVLVGVPHKEAVFKTHPLNFLNERTLKGTFFGNYKPRSDIPCVVEKYMNKELELEKFITHTLPFAEINKAFDLM 366          
BLAST of CF417441 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.054e-55
Identity = 119/227 (52.42%), Postives = 139/227 (61.23%), Query Frame = 3
Query:    3 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGMGV*LCSLECPVRMQCS*PSQSMYLTKEPSKELSSGTTNRGLICPLSLICT*TSNWXLEKFITHRIPFSEINKAFEYM 683
            V+HF+GTSTFSEYTVVH+GCVAKINP APLDKVCILSCG+ TGLGAT+NVAKP+                               VD  S RFE AKKFGV +FVN  +HD+P+Q+VIAEMT+GGVDR+VECTG+I  MISAFECVHDG GV    +  P +          +L +   K    G        P  +         LEKFITH IPFSEINKAF+YM
Sbjct:  141 VHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARMSGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTDGGVDRAVECTGSIQAMISAFECVHDGWGV-AVLVGVPKKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEQYMKGELELEKFITHSIPFSEINKAFDYM 366          
BLAST of CF417441 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.017e-54
Identity = 118/227 (51.98%), Postives = 141/227 (62.11%), Query Frame = 3
Query:    3 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGMGV*LCSLECPVRMQCS*PSQSMYLTKEPSKELSSGTTNRGLICPLSLICT*TSNWXLEKFITHRIPFSEINKAFEYM 683
            + HFLGTSTFSEYTVVHSG VAKINP APLDKVCI+SCG+STGLGATLNVAKP++                              VD +SKRF++AK+FGVT+ VN  +HD+PIQ+VIAEMT+GGVDRSVECTG++  MI AFECVHDG GV    +  P +          +L +   K    G        P  +         LEKFITH +PFSEINKAF+YM
Sbjct:  140 IYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGV-AVLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDYM 365          
BLAST of CF417441 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.440e-54
Identity = 120/236 (50.85%), Postives = 145/236 (61.44%), Query Frame = 3
Query:    3 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGMGV*LCSLECPVRMQCS*PSQSMYLTKEPSKELSSGT---TNRGLICPLSLICT*TSNWX-----LEKFITHRIPFSEINKAFEYM 683
            + HF+GTSTFSEYTV HSGCV KI+P APLDKVC+LSCG+STGLGATLNVAKP +                              VD +  RF +AKKFGVT+FVN  +H D+P+Q+VIAEMT+GGVDRSVECTGN++ MISAFECVHDG GV          +    P++       P   L+  T   T  G   P S I +    +      LEKFITH++PFSEINKAF+YM
Sbjct:  142 IYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVNPKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGV---------AVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDYM 368          
BLAST of CF417441 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 4.493e-54
Identity = 116/235 (49.36%), Postives = 143/235 (60.85%), Query Frame = 3
Query:    3 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGMGV*LCSLECPVRMQCS*PSQSMYLTKEPSKELSSGT---TNRGLICPLSLICT*TSNW-----XLEKFITHRIPFSEINKAFEYM 683
            + HF+GTSTFS YTV H GC+AKINP +PLDKVCILSCG+STGLGATLNV KP++                              VD +S RFEEAKKFG+T+FVN  +H +P+QEVIAE+TNGGVDRS+ECTGNI  MI AFECVHDG G         V +    P +    T  P   L+  T   T  G   P + I +    +      ++KFITH++PFS+INKAF+YM
Sbjct:  141 IYHFVGTSTFSVYTVTHVGCLAKINPQSPLDKVCILSCGISTGLGATLNVRKPKKGSTVAVFGLGAVGLAAAEGARMAGASRIIGVDLNSNRFEEAKKFGITEFVNPKDHKKPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWG---------VAVLVGVPHKDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQINKAFDYM 366          
The following BLAST results are available for this feature:
BLAST of CF417441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH_MALDO1.069e-5551.98Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH1_PEA1.069e-5552.86Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH3_SOLTU1.397e-5551.91Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU1.397e-5551.91Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH1_SOLTU1.397e-5551.91Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLLC5.308e-5551.54Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH1_TRIRP9.054e-5552.42Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH1_ARATH2.017e-5451.98Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH1_PETHY3.440e-5450.85Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH_FRAAN4.493e-5449.36Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-371 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417441 ID=CF417441; Name=CF417441; organism=Citrus sinensis; type=EST; length=683bp
CTGTAAATCACTTCCTTGGAACATCCACCTTTAGCGAGTACACTGTCGTT
CATTCAGGCTGCGTTGCAAAGATCAATCCTCTGGCACCTTTGGATAAAGT
CTGCATTCTCAGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTAAATG
TGGCAAAACCTGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCTCGGAGCT
GTTGGTTTAGCAGCTGCAGAAGGTGCAAGAATTGCTGGAGCATCAAGAAT
TATTGGTGTTGATAGGAGCTCCAAGAGGTTTGAGGAAGCCAAAAAGTTTG
GAGTAACTGATTTTGTCAACACCAGTGAGCACGACAGACCAATTCAAGAG
GTAATTGCAGAGATGACGAACGGTGGAGTTGACAGAAGTGTGGAGTGCAC
CGGCAACATTGATAACATGATCTCAGCCTTCGAGTGTGTTCATGATGGGA
TGGGGGTGTAGCTGTGCTCGTTGGAGTGCCCAGTAAGGATGCAGTGTTCA
TGACCAAGCCAATCAATGTACTTAACGAAAGAACCCTCAAAGGAACTTTC
TTCGGGAACTACAAACCGCGGACTGATCTGCCCTCTGTCGTTGATATGTA
CATGAACNAGCAACTGGNAACTAGAGAAGTTTATAACCCATCGCATCCCT
TTCTCGGAAATCAATAAAGCCTTCGAGTACATG
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