CF417445
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417445 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.042e-15 Identity = 45/147 (30.61%), Postives = 67/147 (45.58%), Query Frame = 3 Query: 153 KIPPSDDPTTGVRSKDVVISPEPPVSARIFIPYEA---------QNPNQNKL-PLLFYLRGGGFCRQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEDSWAALNWVASHVSGNGPEPWLNDHADFG-KVLIGGASAG 560 K+P + +P GV S DV+I + + +R++ P +A QNP ++ P++ + GG F SA Y C A+VVSV Y P+ P Y+D WA L WV S WL D ++ + G S+G Sbjct: 52 KVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS-------SSWLRSKKDSKVRIFLAGDSSG 191 HSP 2 Score: 28.1054 bits (61), Expect = 2.042e-15 Identity = 14/35 (40.00%), Postives = 20/35 (57.14%), Query Frame = 1 Query: 559 GGNIAHTLAFRVGSIGLPCVKLAGVIMVHPFFGGT 663 GGNI H +A R + + G I+++P FGGT Sbjct: 191 GGNIVHNVAVRAVESR---IDVLGNILLNPMFGGT 222
BLAST of CF417445 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.567e-15 Identity = 42/149 (28.19%), Postives = 60/149 (40.27%), Query Frame = 3 Query: 153 KIPPSDDPTTGVRSKDVVISPEPPVSARIFIPYEAQNPNQNKL------------PLLFYLRGGGFCRQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEDSWAALNWVASHVSGNGPEPWLNDHADFG-KVLIGGASAG 560 K+ + +P GV S DV+I + +R++ P A + P++ + GG F SA Y C +VVSV Y P+ P P Y+D W ALNWV S WL D + + G S+G Sbjct: 52 KVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNS-------RSWLKSKKDSKVHIFLAGDSSG 193 HSP 2 Score: 34.6538 bits (78), Expect = 7.567e-15 Identity = 16/34 (47.06%), Postives = 22/34 (64.71%), Query Frame = 1 Query: 559 GGNIAHTLAFRVGSIGLPCVKLAGVIMVHPFFGG 660 GGNIAH +A R G G + + G I+++P FGG Sbjct: 193 GGNIAHNVALRAGESG---IDVLGNILLNPMFGG 223
BLAST of CF417445 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.799e-14 Identity = 46/150 (30.67%), Postives = 63/150 (42.00%), Query Frame = 3 Query: 153 KIPPSDDPTTGVRSKDVVISPEPPVSARIFIPYEAQNPNQNK-------------LPLLFYLRGGGFCRQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEDSWAALNWVASHVSGNGPEPWLNDHADFG-KVLIGGASAG 560 K+P + P GV S D V S ++ RI+ P + ++ +P+L + GG F SA Y FC +VVSV+Y P+ P Y+D W ALNWV S V WL D V + G S+G Sbjct: 52 KVPANSFPLDGVFSFDHVDSTTNLLT-RIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV-------WLQSGKDSNVYVYLAGDSSG 193 HSP 2 Score: 36.5798 bits (83), Expect = 2.799e-14 Identity = 18/34 (52.94%), Postives = 23/34 (67.65%), Query Frame = 1 Query: 559 GGNIAHTLAFRVGSIGLPCVKLAGVIMVHPFFGG 660 GGNIAH +A R + G VK+ G I++HP FGG Sbjct: 193 GGNIAHNVAVRATNEG---VKVLGNILLHPMFGG 223
BLAST of CF417445 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 44/175 (25.14%), Postives = 67/175 (38.29%), Query Frame = 3 Query: 153 KIPPSDDPTTGVRSKDVVISPEPPVSARIF-------------------IPYEAQNPNQNKLPLLFYLRGGGFCRQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEDSWAALNWVASHVSGNGPEPWLNDHADF-GKVLIGGASAGREYCTHSGVSGRVNRVTLC 617 ++P + P GV S D +I + RI+ + + P P++ + GG F SA Y + C F + +VVSV Y P+ P Y+D W AL WV S +P++ D +V + G S+G H V V +C Sbjct: 52 RVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS-------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVC 219 The following BLAST results are available for this feature:
BLAST of CF417445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417445 ID=CF417445; Name=CF417445; organism=Citrus sinensis; type=EST; length=673bpback to top |