CF417449

Overview
NameCF417449
Unique NameCF417449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 1.846e-97
Identity = 133/174 (76.44%), Postives = 153/174 (87.93%), Query Frame = 3
Query:    9 VKASTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            VK ++    P T+ + ++IASLQQYT SF+QENLIG+GMLGSVYRA+LP+GKL AVKKLDKRAS QQ+D EF+ELVNNID IRH+NIVEL GYCAEH QRLL+YEYCSNGTLQD LHSDDE K  LSWNTR+ MALGAARALEYLHE+C+PPI+HRNFKSAN+LLDDDL+V VS
Sbjct:  457 VKKTSPKRLPLTSVKHYSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVS 630          

HSP 2 Score: 99.3673 bits (246), Expect = 1.846e-97
Identity = 49/53 (92.45%), Postives = 50/53 (94.34%), Query Frame = 1
Query:  535 CGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLT 693
            CGLAPLISSGSVSQLSG LL AYGYGAPEF+SGIYT QSDVYSFGVVMLELLT
Sbjct:  632 CGLAPLISSGSVSQLSGQLLAAYGYGAPEFDSGIYTWQSDVYSFGVVMLELLT 684          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 3.183e-88
Identity = 119/173 (68.79%), Postives = 145/173 (83.82%), Query Frame = 3
Query:   12 KASTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            + ++K+  P T  + FT+ASLQQ+TNSFS ENLIG GMLGSVYRA+LP GKL AV+KLDK++ + +++ +FLELVNNIDRIRHANIV+L G+C+EH QRLLI+EYC NGTL D+LH DD LK  LSWN R+R+AL AA+ALEYLHEIC PP +HRNFKSANILLDDD+ V VS
Sbjct:  451 RTTSKSHGPLTAVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVS 623          

HSP 2 Score: 93.9745 bits (232), Expect = 3.183e-88
Identity = 46/53 (86.79%), Postives = 48/53 (90.57%), Query Frame = 1
Query:  535 CGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLT 693
            CGLAPLISSG+VSQLSG LL AYGYGAPEFE GIYT + DVYSFGVVMLELLT
Sbjct:  625 CGLAPLISSGAVSQLSGQLLAAYGYGAPEFEYGIYTMKCDVYSFGVVMLELLT 677          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.860e-66
Identity = 99/157 (63.06%), Postives = 126/157 (80.25%), Query Frame = 3
Query:   45 TARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDL 515
            TA  +T++SLQ  TNSFSQEN+IG G LG VYRA+ P+GK++A+KK+D  A S Q++D FLE V+N+ R+RH NIV L GYC EHGQRLL+YEY  NG L D LH++D+   NL+WN R+++ALG A+ALEYLHE+C P IVHRNFKSANILLD++L
Sbjct:  379 TASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEEL 535          

HSP 2 Score: 55.4546 bits (132), Expect = 5.860e-66
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFE-SGIYTCQSDVYSFGVVMLELLT 693
            GLA L +  +  Q+S  ++ ++GY APEF  SGIYT +SDVY+FGVVMLELLT
Sbjct:  543 GLAAL-TPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLT 594          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 2.857e-62
Identity = 96/163 (58.90%), Postives = 128/163 (78.53%), Query Frame = 3
Query:   42 TTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            ++A  FTIASLQQYTN+FS+EN+IG G +G+VYRA+L  GK LAVKKL    +  Q D EFL LV+N+ +++  +I+EL GYC E GQRLL+YEYC NG+LQD LH D +L   L+WN RI +ALGA++AL++LHE+CQPP+VH+NFKS+ +LLD  L+V V+
Sbjct:  480 SSATVFTIASLQQYTNNFSEENIIGEGSIGNVYRAELRHGKFLAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSLQDALHLDRKLHKKLTWNVRINIALGASKALQFLHEVCQPPVVHQNFKSSKVLLDGKLSVRVA 642          

HSP 2 Score: 53.5286 bits (127), Expect = 2.857e-62
Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLT 693
            GLA ++     SQ++G       Y APE E G YTCQSDV+S GVVMLELLT
Sbjct:  645 GLAYMLPPRPTSQMAG-------YAAPEVEYGSYTCQSDVFSLGVVMLELLT 689          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 8.659e-52
Identity = 84/158 (53.16%), Postives = 111/158 (70.25%), Query Frame = 3
Query:   42 TTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDL 515
            +   ++T++ LQ  TNSFS +NL+G G  G VYRAQ  DGK+LAVKK+D  A      D+F E+V+ I  + H N+ +L GYC+EHGQ L++YE+  NG+L D LH  +E    L WN R+++ALG ARALEYLHE+C P IVH+N KSANILLD +L
Sbjct:  402 SNVNTYTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSEL 559          

HSP 2 Score: 43.8986 bits (102), Expect = 8.659e-52
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 1
Query:  604 GYGAPEFE-SGIYTCQSDVYSFGVVMLELLT 693
            GY APE   SG Y+ +SDVYSFGVVMLELLT
Sbjct:  585 GYSAPETSMSGQYSLKSDVYSFGVVMLELLT 615          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.471e-51
Identity = 88/170 (51.76%), Postives = 116/170 (68.24%), Query Frame = 3
Query:    6 AVKASTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDL 515
            AVK ST      +  R +++A LQ  T SFS +NL+G G  G VYRA+  DGK+LAVKK+D  A      D+F+E+V+ I  + H N+ +L GYCAEHGQ L++YE+  NG+L D LH  +E    L WN+R+++ALG ARALEYLHE+C P IV +N KSANILLD +L
Sbjct:  389 AVKKSTVVVP--SNVRLYSVADLQIATGSFSVDNLLGEGTFGRVYRAEFDDGKVLAVKKIDSSALPHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLHLSEEESKALVWNSRVKIALGTARALEYLHEVCSPSIVDKNIKSANILLDSEL 556          

HSP 2 Score: 44.2838 bits (103), Expect = 1.471e-51
Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 1
Query:  595 TAYGYGAPEFE-SGIYTCQSDVYSFGVVMLELLT 693
            T  GY APE   SG Y+ +SD+YSFGVVMLELLT
Sbjct:  579 TDEGYSAPEVSMSGQYSLKSDIYSFGVVMLELLT 612          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.204e-47
Identity = 83/170 (48.82%), Postives = 111/170 (65.29%), Query Frame = 3
Query:   15 ASTKTAKPFTTARS---FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDL 515
            A+   AK  T+ RS   F ++ LQ  T +FS  NL+G G +G VYRA+  DG+ LAVKK+D       K +    +V ++ +IRH NI EL GYC+E G  +L+YEY  NG+L + LH  D     L+WNTR+R+ALG ARA+EYLHE C P ++H+N KS+NILLD DL
Sbjct:  375 ANKLNAKRTTSTRSAVEFELSDLQSATANFSPGNLLGEGSIGRVYRAKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLDADL 544          

HSP 2 Score: 42.743 bits (99), Expect = 1.204e-47
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 1
Query:  523 VFLXCGLAPLISSGSVSQLSGHLLTAY----GYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            + L   L P +S   +S+   +L T+     GY APE  +   YT +SDVYSFGVVMLELLT
Sbjct:  538 ILLDADLNPRLSDYGLSKF--YLRTSQNLGEGYNAPEARDPSAYTPKSDVYSFGVVMLELLT 597          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.528e-47
Identity = 78/172 (45.35%), Postives = 115/172 (66.86%), Query Frame = 3
Query:    3 TAVKASTKTAKPFTTA-RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDL 515
            T  ++ST    P T   ++F++A LQ   + FS   L+G G +G VY+A+  DG+  AVK++D     +   +EF  +V++I  I H N+ EL GYC+E G+ +L+YEY ++G+L   LH  D+    L+WNTRIR+ALG A+A+EYLHE C PP+VH+N KS+NILLD++L
Sbjct:  384 TPDRSSTSQDSPDTRGVKAFSLADLQNTASCFSPNRLLGEGTIGRVYKAKFQDGRKFAVKEIDSSLLGKGNPEEFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNEL 555          

HSP 2 Score: 41.9726 bits (97), Expect = 4.528e-47
Identity = 22/31 (70.97%), Postives = 24/31 (77.42%), Query Frame = 1
Query:  604 GYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            GY APE  +   YT +SDVYSFGVVMLELLT
Sbjct:  578 GYNAPECTDPSAYTQKSDVYSFGVVMLELLT 608          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.303e-39
Identity = 76/161 (47.20%), Postives = 103/161 (63.98%), Query Frame = 3
Query:   54 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNN-----LSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILL-DDDLA 518
            S  +  L+  T++F  + LIG G  G VY   L  G+  A+KKLD   SS+Q D EFL  V+ + R++  N+VEL GYC + G R+L YEY  NG+L D+LH    +K       LSW  R+++A+GAA+ LEYLHE  QP I+HR+ KS+NILL DDD+A
Sbjct:   55 SIAVDELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLD---SSKQPDREFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVA 212          

HSP 2 Score: 42.3578 bits (98), Expect = 2.303e-39
Identity = 22/39 (56.41%), Postives = 29/39 (74.36%), Query Frame = 1
Query:  580 SGHLLTAYGYGAPEFE-SGIYTCQSDVYSFGVVMLELLT 693
            S  +L  +GY APE+  +G  + +SDVYSFGVV+LELLT
Sbjct:  232 STRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLT 270          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.200e-37
Identity = 72/160 (45.00%), Postives = 103/160 (64.38%), Query Frame = 3
Query:   51 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            R  T A L + TN F  ++L+G+G  G VY+AQL DG ++A+KKL     S Q D EF   +  I +I+H N+V L GYC    +RLL+YEY   G+L+D+LH   ++   L+W  R ++A+GAAR L +LH  C P I+HR+ KS+N+LLD++L   VS
Sbjct:  874 RKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIH--VSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVS 1031          

HSP 2 Score: 35.039 bits (79), Expect = 1.200e-37
Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            G+A L+S+         L    GY  PE+ +S   + + DVYS+GVV+LELLT
Sbjct: 1034 GMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT 1086          
The following BLAST results are available for this feature:
BLAST of CF417449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 329
Match NameE-valueIdentityDescription
SRF3_ARATH1.846e-9776.44Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
SRF1_ARATH3.183e-8868.79Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
SRF8_ARATH5.860e-6663.06Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
SUB_ARATH2.857e-6258.90Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]
SRF7_ARATH8.659e-5253.16Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
SRF6_ARATH1.471e-5151.76Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
SRF5_ARATH1.204e-4748.82Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
SRF4_ARATH4.528e-4745.35Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
PTI1_SOLLC2.303e-3947.20Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
BRI1_SOLLC1.200e-3745.00Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-379 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417449 ID=CF417449; Name=CF417449; organism=Citrus sinensis; type=EST; length=693bp
GAACTGCTGTGAAGGCTTCCACTAAAACTGCAAAACCTTTCACAACTGCA
AGGTCTTTCACCATTGCATCCCTTCAACAATATACTAACAGCTTTTCTCA
AGAAAACCTTATAGGTGCTGGCATGCTGGGGAGTGTTTATAGGGCACAGC
TTCCTGATGGAAAGCTACTAGCAGTCAAGAAACTGGACAAGAGGGCTTCA
AGTCAGCAGAAGGATGATGAATTTCTTGAACTGGTGAACAATATTGATCG
AATTCGACATGCTAATATAGTCGAGCTCAAGGGTTACTGCGCAGAGCATG
GCCAAAGGCTTCTTATATATGAGTATTGCAGTAACGGAACTCTGCAGGAT
ATGCTACACTCAGATGATGAATTAAAAAATAATCTTTCATGGAACACCCG
CATTCGGATGGCACTTGGAGCTGCTAGAGCCTTAGAGTACTTGCACGAGA
TTTGTCAACCACCTATTGTACACAGAAATTTTAAGTCGGCCAATATTCTT
CTTGACGATGATCTTGCTGTGAGTGTTTCTGNATTGTGGTTTGGCTCCAC
TAATATCATCAGGTTCAGTTAGTCAGTTGTCAGGACATCTGCTAACAGCT
TATGGTTATGGAGCTCCAGAATTTGAGTCAGGAATTTATACTTGTCAGAG
TGATGTTTACAGCTTTGGGGTAGTTATGCTAGAACTCTTAACA
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