CF417508

Overview
NameCF417508
Unique NameCF417508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 5.086e-110
Identity = 196/212 (92.45%), Postives = 205/212 (96.70%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLAS+VLFEANIL VLSEVLSAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV+AAQK HE+DPLQKPKQDRYALRTSPQWLGP  EVIR+STKSIEREINSVNDNPLI+VSRNKALHGGNFQGTPIGVSMDN+RLA+ASIGKLMFAQFSELVNDFY+NGLPSNLSGGRNP LDYGFKGAEIAMAAYCSELQF
Sbjct:  258 NGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRSSTKSIEREINSVNDNPLINVSRNKALHGGNFQGTPIGVSMDNTRLAVASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQF 469
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL1_PETCR (Phenylalanine ammonia-lyase 1 OS=Petroselinum crispum GN=PAL1 PE=1 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 7.344e-109
Identity = 191/212 (90.09%), Postives = 205/212 (96.70%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+G+AS+VLFEANIL VL+EV+SAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV+AAQK HE+DPLQKPKQDRYALRTSPQWLGPQ EVIR+STK IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDN+RLAIA+IGKLMFAQFSELVNDFY+NGLPSNLSGGRNP LDYGFKGAEIAMA+YCSELQF
Sbjct:  260 NGTAVGSGMASMVLFEANILAVLAEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQF 471
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PALY_CITLI (Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL6 PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 1.636e-108
Identity = 192/212 (90.57%), Postives = 202/212 (95.28%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLA+ VLFEANIL ++SEVLSAIFAE M GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV+AAQK HE DPLQKPKQDRYALRTSPQWLGPQ EVIRA+TK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLAIASIGKLMFAQFSELVNDFY+NGLPSNL+GGRNP LDYGFKGAEIAMA+YCSELQF
Sbjct:  264 NGTAVGSGLAATVLFEANILAIMSEVLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHETDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTGGRNPSLDYGFKGAEIAMASYCSELQF 475
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 1.636e-108
Identity = 190/212 (89.62%), Postives = 205/212 (96.70%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+G+AS+VLFEANIL VL+EV+SAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV+AAQK HE+DPLQKPKQDRYALRTSPQWLGPQ EVIR+STK IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIG+SMDN+RLAIA+IGKLMFAQFSELVNDFY+NGLPSNLSGGRNP LDYGFKGAEIAMA+YCSELQF
Sbjct:  260 NGTAVGSGMASMVLFEANILAVLAEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGMSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQF 471
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PALY_MEDSA (Phenylalanine ammonia-lyase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 2.137e-108
Identity = 194/212 (91.51%), Postives = 202/212 (95.28%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLASIVLFEANIL VLSEVLSAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV+AA+K HEIDPLQKPKQDRYALRTSPQWLGP  EVIR STKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLA+ASIGKLMFAQFSELVNDFY+NGLPSNLS  RNP LDYGFKGAEIAMA+YCSELQ+
Sbjct:  269 NGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQY 480
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL3_PETCR (Phenylalanine ammonia-lyase 3 OS=Petroselinum crispum GN=PAL3 PE=2 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 2.137e-108
Identity = 190/212 (89.62%), Postives = 205/212 (96.70%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+G+AS+VLFEANIL VL+EV+SAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV+AAQK HE+DPLQKPKQDRYALRTSPQWLGPQ EVIR+STK IEREINSVNDNPLIDVSRNKA+HGGNFQG+PIGVSMDN+RLAIA+IGKLMFAQFSELVNDFY+NGLPSNLSGGRNP LDYGFKGAEIAMA+YCSELQF
Sbjct:  262 NGTAVGSGMASMVLFEANILAVLAEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREINSVNDNPLIDVSRNKAIHGGNFQGSPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQF 473
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PALY_DIGLA (Phenylalanine ammonia-lyase OS=Digitalis lanata PE=2 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 3.645e-108
Identity = 190/212 (89.62%), Postives = 203/212 (95.75%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLASI L+EANIL++L+EV+SA+FAE M GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV+AAQK HE+DPLQKPKQDRYALRTSPQWLGPQ EVIR +TK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFY+NGLPSNLSGGRNP LDYGFKG+EIAMA+YCSELQF
Sbjct:  257 NGTAVGSGLASIALYEANILSLLAEVMSAVFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKMHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRTATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGSEIAMASYCSELQF 468
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL4_ARATH (Phenylalanine ammonia-lyase 4 OS=Arabidopsis thaliana GN=PAL4 PE=1 SV=1)

HSP 1 Score: 390.193 bits (1001), Expect = 4.760e-108
Identity = 192/212 (90.57%), Postives = 202/212 (95.28%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLAS VLF+ANIL VLSEV+SA+FAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV+ AQ  HE+DPLQKPKQDRYALRTSPQWLGPQ EVIRA+TK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGV+MDNSRLAIASIGKLMFAQFSELVNDFY+NGLPSNLSGGRNP LDYGFKGAEIAMA+YCSELQF
Sbjct:  251 NGTAVGSGLASTVLFDANILAVLSEVMSAMFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKEAQLLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVAMDNSRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQF 462
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 390.193 bits (1001), Expect = 4.760e-108
Identity = 190/212 (89.62%), Postives = 204/212 (96.23%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+G+AS+VLFE NIL VL+EV+SAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV+AA+K HE+DPLQKPKQDRYALRTSPQWLGPQ EVIR+STK IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDN+RLAIA+IGKLMFAQFSELVNDFY+NGLPSNLSGGRNP LDYGFKGAEIAMA+YCSELQF
Sbjct:  252 NGTAVGSGMASMVLFETNILAVLAEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAEKQHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQF 463
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL1_PRUAV (Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=PAL1 PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 8.120e-108
Identity = 192/212 (90.57%), Postives = 202/212 (95.28%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLAS VLF+ NIL +LSE+LSAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV+AA+K HE DPLQKPKQDRYALRTSPQWLGPQ EVIR STKSIEREI+SVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLAIASIGKLMFAQFSELVNDFY+NGLPSNLSGGRNP LDYGFKGAEIAMA+YCSELQF
Sbjct:  261 NGTAVGSGLASTVLFDTNILALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEQDPLQKPKQDRYALRTSPQWLGPQIEVIRYSTKSIEREIDSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQF 472
The following BLAST results are available for this feature:
BLAST of CF417508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
PALY_CAMSI5.086e-11092.45Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PAL1_PETCR7.344e-10990.09Phenylalanine ammonia-lyase 1 OS=Petroselinum cris... [more]
PALY_CITLI1.636e-10890.57Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL... [more]
PAL2_PETCR1.636e-10889.62Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]
PALY_MEDSA2.137e-10891.51Phenylalanine ammonia-lyase OS=Medicago sativa PE=... [more]
PAL3_PETCR2.137e-10889.62Phenylalanine ammonia-lyase 3 OS=Petroselinum cris... [more]
PALY_DIGLA3.645e-10889.62Phenylalanine ammonia-lyase OS=Digitalis lanata PE... [more]
PAL4_ARATH4.760e-10890.57Phenylalanine ammonia-lyase 4 OS=Arabidopsis thali... [more]
PAL1_DAUCA4.760e-10889.62Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PAL1_PRUAV8.120e-10890.57Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-438 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417508 ID=CF417508; Name=CF417508; organism=Citrus sinensis; type=EST; length=639bp
TAACGGAACAGGAGTGGGTGCTGGCTTGGCTTCTATTGTTCTTTTTGAGG
CTAATATTTTAACTGTTTTGTCCGAAGTTTTGTCAGCAATTTTTGCGGAA
GCTATGCAAGGAAAGCCTGAGTTTACGGATCATTTGACTCACAAGCTGAA
GCATCACCCTGGACAAATTGAAGCTGCAGCTATAATGGAACATATCTTGG
ATGGTAGCTCTTATGTTGAGGCAGCACAAAAATTCCATGAAATTGACCCT
TTACAGAAGCCTAAGCAAGATCGGTATGCTCTTCGAACTTCACCACAATG
GTTAGGCCCTCAAGCTGAAGTGATTCGAGCATCGACAAAGTCTATTGAGA
GGGAGATTAACTCTGTGAATGATAATCCGTTGATTGATGTTTCAAGGAAC
AAGGCATTACACGGTGGCAATTTCCAGGGCACTCCAATTGGTGTCTCTAT
GGATAATTCAAGATTGGCAATTGCTTCGATTGGGAAACTCATGTTTGCTC
AATTTTCTGAGCTGGTTAATGATTTTTACAGTAATGGGTTGCCTTCAAAT
CTGTCTGGTGGTAGGAATCCATGCTTGGATTATGGGTTCAAAGGTGCCGA
AATAGCAATGGCTGCGTATTGTTCCGAGCTCCAGTTTCT
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