CF417511

Overview
NameCF417511
Unique NameCF417511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10821 contig Csv1_Contig10821:55..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417511 vs. ExPASy Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = 3
Query:  168 DVPKGHFAVYVGEHRSRYIVPISFLSHPEFQCLLRQAEEEFGFDHDM-GLTIPCEEVVFRSLTSML 362
            D PKG+ AVYVGE   R+++P+S+L+ P FQ LL QAEEEFG+DH M GLTIPC E VF+ +TS L
Sbjct:   16 DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCL 81          
BLAST of CF417511 vs. ExPASy Swiss-Prot
Match: ARG7_PHAAU (Indole-3-acetic acid-induced protein ARG7 OS=Phaseolus aureus GN=ARG7 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.030e-16
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 3
Query:  165 LDVPKGHFAVYVGEHRSRYIVPISFLSHPEFQCLLRQAEEEFGFDHDM-GLTIPCEEVVFRSLTSML 362
            LD PKG+ AVYVGE+  R+++P+S L+ P FQ LL QAEEEFG+DH M GLTIPC E +F+ +TS L
Sbjct:   23 LDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCL 89          
BLAST of CF417511 vs. ExPASy Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16
Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 3
Query:  165 LDVPKGHFAVYVGEHRSRYIVPISFLSHPEFQCLLRQAEEEFGFDHDM-GLTIPCEEVVFRSLTSML 362
            +D PKG+ AVYVGE   R+++P+S+++ P FQ LL QAEEEFG+DH M GLTIPC E VF+ +T  L
Sbjct:   15 VDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRITCCL 81          
BLAST of CF417511 vs. ExPASy Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 3
Query:  108 RCSSLGKKQHSSYDEDGLPLDVPKGHFAVYVGEHRSRYIVPISFLSHPEFQCLLRQAEEEFGFDH-DMGLTIPCEEVVFRSLTSML 362
            R   + K   S+       +DV KG+ AVYVGE   R+++P+S+L+ P FQ LL QAEEEFG+ H + GLTIPC E VF+ +TS L
Sbjct:    4 RLPGIRKASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFL 89          
BLAST of CF417511 vs. ExPASy Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 43/86 (50.00%), Postives = 59/86 (68.60%), Query Frame = 3
Query:  108 RCSSLGKKQHSSYDEDGLPLDVPKGHFAVYVGEHRSRYIVPISFLSHPEFQCLLRQAEEEFGFDHDM-GLTIPCEEVVFRSLTSML 362
            R +S+   Q SS       ++VPKG+  VYVG+   R+++P+S+L+ P FQ LL QAEEEFG+DH M GLTIPC+E  F ++TS L
Sbjct:    9 RKTSIAANQASSKS-----VEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHL 89          
BLAST of CF417511 vs. ExPASy Swiss-Prot
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 3
Query:  165 LDVPKGHFAVYVGEHRSRYIVPISFLSHPEFQCLLRQAEEEFGFDHDM-GLTIPCEEVVFRSLTSML 362
            +DVPKG+ AVYVG+   R+ +P+S+L+ P FQ LL QAEEEFG+DH M GLTIPC+E  F ++T+ L
Sbjct:   24 VDVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHL 90          
The following BLAST results are available for this feature:
BLAST of CF417511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
AX15A_SOYBN4.624e-1762.12Auxin-induced protein 15A OS=Glycine max PE=2 SV=1[more]
ARG7_PHAAU1.030e-1661.19Indole-3-acetic acid-induced protein ARG7 OS=Phase... [more]
AXX15_SOYBN1.345e-1658.21Auxin-induced protein X15 OS=Glycine max PE=2 SV=1[more]
AX6B_SOYBN8.720e-1648.84Auxin-induced protein 6B OS=Glycine max PE=2 SV=1[more]
AX10A_SOYBN1.487e-1550.00Auxin-induced protein X10A OS=Glycine max PE=2 SV=... [more]
A10A5_SOYBN2.537e-1558.21Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-441 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417511 ID=CF417511; Name=CF417511; organism=Citrus sinensis; type=EST; length=701bp
TGTTTCTTGCCTAGCTCTACCTTCACTCTCTCAAAAACCAGATCAAAATG
GCCATTAGAAAGTCAAGCAAGCTCCCACAAGCAGCAGTCTTGAAGCAGAT
TCTCAAGAGATGTTCAAGCCTGGGCAAGAAACAACATAGCTCCTATGATG
AAGATGGCCTCCCTCTTGATGTCCCGAAAGGCCATTTTGCTGTCTACGTT
GGCGAGCACAGAAGCAGATACATTGTTCCAATCTCTTTCTTGTCTCATCC
TGAGTTTCAATGCCTGCTTCGACAAGCTGAGGAAGAGTTTGGTTTCGATC
ATGATATGGGGCTCACTATCCCTTGTGAAGAAGTCGTTTTTCGCTCTCTA
ACATCCATGCTTAGATGAAAAGGAAAAAGAGCTTGGTTTGCTTGCTTGGA
GGAGAAGATGATCCATTACAAGATGAAGCTCTTTTGCTTCTCTTTTTTTT
TTTACATCTTCTCCAGATCTTGTTTTTCTTTAATTTTTTTTTTTCTTTTG
AACCCATACAGGGTTTTTATTCTAAGTGACTCTAACTTGACCCAAGAATC
AAGAATTATTAAATGTGTTCTGGGTTAGAATTGTATAAAAATGTAAGGGG
GGTTTTTCCTCACAGATAACATCCTGTGAGAAAAGTTTTAATAATTANTG
CCNAGAATTAGTGAAGCAAAGGGGTTCATTTCCTCTCCTAAAAAAAAAAA
A
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