CF417521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417521 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.410e-41 Identity = 89/149 (59.73%), Postives = 107/149 (71.81%), Query Frame = 2 Query: 134 RSGANQLSSVK--YLPSLRRNVNLSVRCTAXXXXXXXXXXXX-PTIPKAE---PQPP--KKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSD 556 RS NQ +++ Y+P+LRRNV+L VR A PT P A PQP + P+MST FS++ AFSGPAPERINGRLAMIGFVAA+GVEI+KGQ + QLS GGVAWFLGTSVLL++ASL+P F+GVSVESKS M+SD Sbjct: 20 RSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSD 168 HSP 2 Score: 32.3426 bits (72), Expect = 1.410e-41 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 574 GRFAMLGLVALAFTEF 621 GR AMLGLVALAFTEF Sbjct: 174 GRIAMLGLVALAFTEF 189
BLAST of CF417521 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.171e-26 Identity = 68/170 (40.00%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 65 MAASLATQSMLASPVAARVTGIRRSGANQLSSVKY---LPSLRRNVNLSVRCTAXXXXXXXXXXXXP--TIPKAEPQPPKKPRMSTGFS-EVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSD 556 MA+S ++ A + T I R G N L K LP +RRN +VR T P + ++T + ++F+F G APERINGR AMIGFVAA+GVE++ G+DVF+Q+ +GGV WFL TS +L +A+L+P+++G+S E+K++GF SD Sbjct: 1 MASSTCYATIPAMSCRGQST-ITRFGPNNLFLGKQSYELPLMRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSD 169 HSP 2 Score: 32.7278 bits (73), Expect = 1.171e-26 Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = 1 Query: 574 GRFAMLGLVALAFTEF 621 GRFAM+GLVALAFTE+ Sbjct: 175 GRFAMIGLVALAFTEY 190
BLAST of CF417521 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.104e-23 Identity = 53/103 (51.46%), Postives = 70/103 (67.96%), Query Frame = 2 Query: 254 PTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLS--DGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSD 556 PT A P+P K + + + AFSGPAPERINGRLAM+GFVAAL VE ++G + Q+ G+AWFL T+ + +VASL+PL +G SVESKS G ++D Sbjct: 100 PTTIPAAPKPVTK-KANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSAD 201 HSP 2 Score: 31.5722 bits (70), Expect = 1.104e-23 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 574 GRFAMLGLVALAFTEF 621 GRFAMLGLVALA TEF Sbjct: 207 GRFAMLGLVALAATEF 222
BLAST of CF417521 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.453e-23 Identity = 66/161 (40.99%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 77 LATQSMLASPVAARVTGIRRSGANQLSSVKYLPSLRRNVNLSVRCTAXXXXXXXXXXXXPTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSD 556 +AT ++S A V + RS A+ + + LP+L R L VR P+ P PP KP+ ST + AFSGPAPERINGRLAM+GFV AL VE +G + +QL G G AWF T +L++ASLVPL +G S E ++ M ++ Sbjct: 1 MATMMSMSSFAGAAV--VPRSSASSFGA-RSLPALGRRA-LVVRAQTEG----------PSAP-----PPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNAN 142 HSP 2 Score: 29.261 bits (64), Expect = 2.453e-23 Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = 1 Query: 574 GRFAMLGLVALAFTE 618 GRFAMLGLVALA TE Sbjct: 148 GRFAMLGLVALAATE 162
BLAST of CF417521 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.197e-23 Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 281 PPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSD 556 PP KP+ ST + AFSGPAPERINGRLAM+GFV AL VE +G + +QL G G AWF T +L++ASLVPL +G S E ++ M ++ Sbjct: 45 PPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNAN 137 HSP 2 Score: 28.4906 bits (62), Expect = 3.197e-23 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 1 Query: 574 GRFAMLGLVALAFTE 618 GRFAM+GLVALA TE Sbjct: 143 GRFAMIGLVALAATE 157
BLAST of CF417521 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.167e-12 Identity = 44/86 (51.16%), Postives = 51/86 (59.30%), Query Frame = 2 Query: 257 TIPKAEPQPPKKPRMSTG--FSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLF 508 T P + P PP P +EV FSG APE INGRLAM+GFVAALG E+S G+ V QL D L T VL + ASL+P F Sbjct: 47 TPPPSSPSPPPPPPTPAAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAF 130 HSP 2 Score: 20.4014 bits (41), Expect = 2.167e-12 Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 1 Query: 574 GRFAMLGLVALAFTE 618 GRFAM+G A+ E Sbjct: 150 GRFAMIGFAAMLVYE 164 The following BLAST results are available for this feature:
BLAST of CF417521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417521 ID=CF417521; Name=CF417521; organism=Citrus sinensis; type=EST; length=621bpback to top |