CF417557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH2_HUMAN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens GN=PTRH2 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.041e-24 Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 3 Query: 123 SLAVSFRPENFIPGLVIGFIFGMLLDLSKP---GKNYVKKKNFLPRKPQEQVSVSSDGDQDLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM*AGISCGK 506 SL + + GL +G GM L S G K + + + S+ D + K+ LVVR DLKMG GK+A+QC+HAA Y ++ + + +L++WE CGQPK+VV +++ + A ++ K Sbjct: 5 SLVMEYLAHPSTLGLAVGVACGMCLGWSLRVCFGMLPKSKTSKTHTDTESEASILGDSGE-YKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAK 134 HSP 2 Score: 54.6842 bits (130), Expect = 7.041e-24 Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 2 Query: 509 AENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 646 A+ GL ++ DAGRTQ++ GS+TVL IGPGP L+D VTG +L Sbjct: 133 AKMLGLTVSLIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH2_BOVIN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus GN=PTRH2 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.552e-23 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 3 Query: 183 FGMLLDLSKPGKNYVKKKNFLPRKPQEQVSVSSDGDQ-DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 FGML K+ V++ N P + S G+ + K+ LVVR DLKMG GK+A+QC+HAA Y ++ + + LL++WE CGQPK+VV +++ + Sbjct: 37 FGML------PKSSVRETN-----PDTETEASILGESGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPELLKEWEYCGQPKVVVKAPDEETL 126 HSP 2 Score: 54.6842 bits (130), Expect = 1.552e-23 Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 2 Query: 509 AENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 646 A+ GL ++ DAGRTQ++ GS+TVL IGPGP L+D VTG +L Sbjct: 133 AKVLGLTVSLIQDAGRTQIAPGSRTVLGIGPGPADLIDKVTGHLKL 178
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH2_MOUSE (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus GN=Ptrh2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.755e-22 Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 3 Query: 294 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 + K+ LVVR DLKMG GK+A+QC+HAA Y + + +L++WE CGQPK+VV ++ + Sbjct: 66 EYKMILVVRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDEDTL 128 HSP 2 Score: 55.0694 bits (131), Expect = 4.755e-22 Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 2 Query: 509 AENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 646 A+ GL ++ DAGRTQ+ GS+TVL IGPGP L+D VTG +L Sbjct: 135 AKTLGLTVSLIQDAGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH2_SCHPO (Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe GN=SPAC19A8.14 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 8.555e-21 Identity = 45/147 (30.61%), Postives = 66/147 (44.90%), Query Frame = 3 Query: 120 VSLAVSFRPENFIPGLVIGFIFGMLLDLSKPGKNYVKKKNFLPRKPQEQ--VSVSSDGDQD------------------------LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 V+ +S P + G V+GF+ G ++ + Y K P+++ VSVS+D D + K+ LVVR DL M GKIA+QCAHAA Y D L+R WE GQ KI + + ++ + Sbjct: 6 VNFMISSFPAAVLVGAVVGFMIGRKYSVADASRGYSSKNANKASNPEKESPVSVSNDEDSESETELLDMLKGNSSLAALALAEGQTKMVLVVRTDLGMTKGKIAAQCAHAALACYKIASAVDPDLVRIWENAGQAKITLQAQTEETL 152 HSP 2 Score: 52.7582 bits (125), Expect = 8.555e-21 Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 509 AENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 646 A + GL V+ DAGRTQ+++GS TVL IGPGP S+++ VTG +L Sbjct: 159 AMSLGLCARVIHDAGRTQIASGSATVLGIGPGPVSVINEVTGSLKL 204
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH2_DROME (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster GN=CG1307 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.458e-20 Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 3 Query: 264 QVSVSSDG----DQDLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 + SVS G + + K+ LVVR DLKMG GKIA+QC H A G Y + LLR WE CG KI V +++ E+ Sbjct: 57 EASVSDKGYGGLNDNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVESEAEL 133 HSP 2 Score: 50.447 bits (119), Expect = 2.458e-20 Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 2 Query: 509 AENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 AE L T ++ DAGRTQ+ A SKTVLA+GP + +D VTG +LL Sbjct: 140 AERQQLNTCLIRDAGRTQIEANSKTVLAVGPAAAADIDRVTGHLKLL 186
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_SULTO (Peptidyl-tRNA hydrolase OS=Sulfolobus tokodaii GN=pth PE=3 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 1.079e-17 Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 3 Query: 300 KLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHL----LRKWEQCGQPKIVVTCKNQQEM 482 K+ +VVR DL MG GKIA+Q AHAA + +++ S L L KW + GQPKIVV + E+ Sbjct: 4 KMVIVVRTDLDMGKGKIAAQVAHAAVSLVLDILNSSNSLWKEWLYKWLEEGQPKIVVKVPSLDEL 68 HSP 2 Score: 54.6842 bits (130), Expect = 1.079e-17 Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 2 Query: 491 NKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 NK +E A LPT ++ DAG+TQ+ G+ T + IGP P LVD +TG +LL Sbjct: 69 NKRYEKAIELNLPTTIIQDAGKTQIEPGTITCIGIGPAPVELVDKITGDLKLL 121
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_METS5 (Peptidyl-tRNA hydrolase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=pth PE=3 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 6.863e-17 Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 2 Query: 509 AENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 A + GLPT V++DAGRTQV G+ T IGPGP L+D +TG +LL Sbjct: 71 ARSQGLPTTVISDAGRTQVEPGTVTCAGIGPGPDDLIDKITGDLKLL 117 HSP 2 Score: 50.8322 bits (120), Expect = 6.863e-17 Identity = 26/64 (40.62%), Postives = 39/64 (60.94%), Query Frame = 3 Query: 297 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELM--QSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 +K+ ++VR D+ MG GKIA+Q AHAA + + M S R L W GQPK+VV + +++ Sbjct: 1 MKMVVMVRTDINMGKGKIAAQVAHAAVSLVLDCMSRSSWRDWLDSWLHEGQPKVVVKVSSLEDL 64
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_SULSO (Peptidyl-tRNA hydrolase OS=Sulfolobus solfataricus GN=pth PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 8.824e-17 Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 3 Query: 297 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEM 482 +K+ +VVR D+KMG GKIA+Q AHAA + ++ S+ + L +W GQPKI+V + E+ Sbjct: 2 IKMVIVVRSDIKMGKGKIAAQVAHAAVTLVVSIINSNNLRWKEWLNEWLHQGQPKIIVKVNSLDEI 67 HSP 2 Score: 52.7582 bits (125), Expect = 8.824e-17 Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 2 Query: 509 AENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 AE LP ++ DAG+TQ+ G+ T L IGP P++LVDS+TG +LL Sbjct: 74 AETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLVDSITGDLKLL 120
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_PYRFU (Peptidyl-tRNA hydrolase OS=Pyrococcus furiosus GN=pth PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.509e-16 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 2 Query: 494 KLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 KL AE GLPT ++ DAG T++ G+ TVLAIGPGP+ +VD VTG +LL Sbjct: 68 KLKSEAEKLGLPTALIRDAGLTEIPPGTITVLAIGPGPEEVVDKVTGHLKLL 119 HSP 2 Score: 47.7506 bits (112), Expect = 1.509e-16 Identity = 23/61 (37.70%), Postives = 33/61 (54.10%), Query Frame = 3 Query: 300 KLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 K +V R DLK+ GK+A Q AH A E + R W + GQ K+VV +N++E+ Sbjct: 6 KQVIVARSDLKLSKGKLAVQVAHGAVTAAFEAYKKKREWFEAWFREGQKKVVVKAQNEEEL 66
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_SULIY (Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pth PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 2.522e-16 Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 3 Query: 297 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEM 482 +K+ +VVR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV + E+ Sbjct: 2 VKMVIVVRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKANSLDEI 67 HSP 2 Score: 50.447 bits (119), Expect = 2.522e-16 Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 2 Query: 509 AENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL Sbjct: 74 AETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120 The following BLAST results are available for this feature:
BLAST of CF417557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417557 ID=CF417557; Name=CF417557; organism=Citrus sinensis; type=EST; length=712bpback to top |