CF417565 | Citrus Genome Database

Overview


Name	CF417565
Unique Name	CF417565
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	649

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
CF417565_ssr1	microsatellite	CF417565_ssr1:1..14.	BLAST: Citrus ESTs to Prunus persica proteins V1
CF417565_ssr20	microsatellite	CF417565_ssr20:20..40.	BLAST: Citrus ESTs to Prunus persica proteins V1
CF417565_ssr91	microsatellite	CF417565_ssr91:91..102.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7970	contig	Csv1_Contig7970:80..728.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 5.145e-57
Identity = 104/161 (64.60%), Postives = 130/161 (80.75%), Query Frame = 3

Query:  138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPF 620
            N+EGDAL AL+ SL+DP+ VLQSWD TLV PCTWFH+TCN DN VTR+DLGN+NLSG+LV +LG+L +LQYLELY NNI GTIP +LGNL  L+SLDLY NN+SG IP +L +LK L FLRLN+N L+G+IPR L  + +L+V+D+S+N L G  P +G F
Sbjct:   26 NAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSF 186

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 4.356e-56
Identity = 105/161 (65.22%), Postives = 126/161 (78.26%), Query Frame = 3

Query:  138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPF 620
            N EGDAL+ LR +L DP+NVLQSWDPTLVNPCTWFH+TCN +N V R+DLGN+ LSG LVPELG L++LQYLELY NNI G IP  LGNL +L+SLDLY N+ SG IP SL KL  L FLRLN+N LTG IP  L  I++L+V+D+S+N L G+ P +G F
Sbjct:   27 NLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSF 187

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 7.430e-56
Identity = 102/161 (63.35%), Postives = 130/161 (80.75%), Query Frame = 3

Query:  138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPF 620
            N EGDAL++LR +L DP+NVLQSWDPTLVNPCTWFH+TCN +N V R+DLGN++LSG+LVP+LG+L++LQYLELY NNI G +P +LGNL +L+SLDLY N+ +G IP SL KL  L FLRLN+N LTG IP  L  I +L+V+D+S+N L G+ P +G F
Sbjct:   30 NMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSF 190

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.110e-51
Identity = 103/164 (62.80%), Postives = 125/164 (76.22%), Query Frame = 3

Query:  138 NSEGDALYALRRSLSDPD---NVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPF 620
            N+EGDAL  L+ SLS  D   NVLQSWD TLV PCTWFH+TCN +N+VTR+DLGN+ LSG+LVPELG+L +LQYLELY NNI G IP ELG+L  L+SLDLY N+ISG IP SL KL  L FLRLN+N L+G+IP  L  +  L+V+D+S+N L G  P +G F
Sbjct:   30 NAEGDALTQLKNSLSSGDPANNVLQSWDATLVTPCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSV-QLQVLDISNNRLSGDIPVNGSF 192

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 8.234e-47
Identity = 96/160 (60.00%), Postives = 118/160 (73.75%), Query Frame = 3

Query:  150 DALYALRRSLSDPD---NVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPF 620
            DAL ALR SLS  D   N+LQSW+ T V PC+WFH+TCN +N VTRLDLG++NLSG LVP+L +L +LQYLEL+ NNI G IP ELG+L  L+SLDL+ NNISG IP SL KL  L FLRL +N L+G+IPR L  +  L V+D+S+N L G  P +G F
Sbjct:   29 DALIALRSSLSSGDHTNNILQSWNATHVTPCSWFHVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSGDIPVNGSF 187

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.667e-31
Identity = 72/158 (45.57%), Postives = 96/158 (60.76%), Query Frame = 3

Query:  138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            +++GDAL+ALR SL    N L  W+   VNPCTW  + C+  N VT L L + N SG L   +G LE+L+ L L  N I G IP + GNL SL SLDL +N ++G+IP ++  LK L FL L+ N+L G IP  L G+ +L  + + SN L G  P S
Sbjct:   28 DAQGDALFALRISLRALPNQLSDWNQNQVNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQS 185

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.253e-28
Identity = 66/156 (42.31%), Postives = 94/156 (60.26%), Query Frame = 3

Query:  138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            N E +AL  ++  L DP  V ++WD   V+PC+W  I+C+ DN V  L   + +LSG L   +G L +L+ + L  NNI G IP E+ +L  L +LDL NN  SG+IP S+ +L +L +LRLN+N L+G  P  L  I  L  +D+S N+L G  P
Sbjct:   32 NPEVEALINIKNELHDPHGVFKNWDEFSVDPCSWTMISCSSDNLVIGLGAPSQSLSGTLSGSIGNLTNLRQVSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLRGPVP 187

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.018e-28
Identity = 65/156 (41.67%), Postives = 90/156 (57.69%), Query Frame = 3

Query:  138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            N E  AL +++  + D   VL  WD   V+PCTW  + C+ +  V  L++ +  LSG L   +G+L HL  L L  N + G IP ELG L  L +LDL  N  SG+IP SL  L  L +LRL+ N L+GQ+P  + G+S L  +D+S N+L G  P
Sbjct:   37 NYEVAALMSVKNKMKDEKEVLSGWDINSVDPCTWNMVGCSSEGFVVSLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPHLVAGLSGLSFLDLSFNNLSGPTP 192

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.614e-26
Identity = 62/158 (39.24%), Postives = 96/158 (60.76%), Query Frame = 3

Query:  138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            +S+G AL +L+R      ++  SWDP    PC+W+ ITC+ DNRV  + + ++ L+   +P+L  L  LQ+L L   N+ G IP   G L  L  LDL +N++SG IP  L +L +L FL LN N+L+G IP ++  + +L+V+ +  N L G+ P+S
Sbjct:   28 SSDGQALLSLKRP---SPSLFSSWDPQDQTPCSWYGITCSADNRVISVSIPDTFLNLSSIPDLSSLSSLQFLNLSSTNLSGPIPPSFGKLTHLRLLDLSSNSLSGPIPSELGRLSTLQFLILNANKLSGSIPSQISNLFALQVLCLQDNLLNGSIPSS 182

HSP 2 Score: 85.5001 bits (210), Expect = 2.583e-16
Identity = 50/112 (44.64%), Postives = 63/112 (56.25%), Query Frame = 3

Query:  270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            +T L    S LSG +    G L +LQ L LY   I GTIP +LG    L +L L+ N ++G IP  L KL+ +  L L  N L+G IP E+   SSL V DVS+NDL G  P
Sbjct:  214 LTTLGFAASGLSGSIPSTFGNLVNLQTLALYDTEISGTIPPQLGLCSELRNLYLHMNKLTGSIPKELGKLQKITSLLLWGNSLSGVIPPEISNCSSLVVFDVSANDLTGDIP 325

HSP 3 Score: 84.7297 bits (208), Expect = 4.406e-16
Identity = 50/136 (36.76%), Postives = 73/136 (53.68%), Query Frame = 3

Query:  270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNN------------------------IQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            + RL +G + LSG++  E+G+L++L +L+LY N+                        I G IP +LGNL +L  LDL  N+ +G IP S   L  L  L LN+N LTGQIP+ +  +  L ++D+S N L G  P
Sbjct:  454 LVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIP 589

HSP 4 Score: 83.1889 bits (204), Expect = 1.282e-15
Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 3

Query:  264 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPT 608
            + +  L L  + L+G +  ELGKL+ +  L L+ N++ G IP E+ N  SL+  D+  N+++G IP  L KL  L  L+L+DN  TGQIP EL   SSL  + +  N L G+ P+
Sbjct:  260 SELRNLYLHMNKLTGSIPKELGKLQKITSLLLWGNSLSGVIPPEISNCSSLVVFDVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPS 374

HSP 5 Score: 82.0333 bits (201), Expect = 2.856e-15
Identity = 44/110 (40.00%), Postives = 70/110 (63.64%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKV-VDVSSNDLCGTXP 605
            LD+ N+ ++G +  +LG L +L+ L+L +N+  G IP+  GNL  L  L L NN ++G+IP S+  L+ L  L L+ N L+G+IP+EL  ++SL + +D+S N   G  P
Sbjct:  505 LDVHNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIPQELGQVTSLTINLDLSYNTFTGNIP 614

HSP 6 Score: 81.2629 bits (199), Expect = 4.872e-15
Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = 3

Query:  276 RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            +L L ++  +G++  EL     L  L+L KN + G+IP ++GNLKSL S  L+ N+ISG IP S      LV L L+ N+LTG+IP EL  +  L  + +  N L G  P S
Sbjct:  336 QLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKS 447

HSP 7 Score: 80.1073 bits (196), Expect = 1.085e-14
Identity = 51/160 (31.87%), Postives = 78/160 (48.75%), Query Frame = 3

Query:  198 LQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKI------------------------PPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            LQ  D        W    C+    +  L L  + LSG +  ++G L+ LQ   L++N+I GTIP   GN   L++LDL  N ++G+I                        P S+AK +SLV LR+ +N+L+GQIP+E+  + +L  +D+  N   G  P
Sbjct:  337 LQLSDNMFTGQIPWELSNCSS---LIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLP 493

HSP 8 Score: 78.9518 bits (193), Expect = 2.418e-14
Identity = 41/115 (35.65%), Postives = 70/115 (60.87%), Query Frame = 3

Query:  267 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            R+++L L  ++LSG L   + K + L  L + +N + G IP E+G L++L+ LDLY N+ SG +P  ++ +  L  L +++N +TG IP +L  + +L+ +D+S N   G  P S
Sbjct:  429 RLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLS 543

HSP 9 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 40/109 (36.70%), Postives = 66/109 (60.55%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            LDL  + L+GR+  EL  L+ L  L L  N++ G +P  +   +SL+ L +  N +SG+IP  + +L++LVFL L  N  +G +P E+  I+ L+++DV +N + G  P
Sbjct:  409 LDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIP 517

HSP 10 Score: 75.8702 bits (185), Expect = 2.047e-13
Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = 3

Query:  282 DLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            D+  ++L+G +  +LGKL  L+ L+L  N   G IP EL N  SLI+L L  N +SG IP  +  LKSL    L +N ++G IP      + L  +D+S N L G  P
Sbjct:  314 DVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIP 421

HSP 11 Score: 73.9442 bits (180), Expect = 7.778e-13
Identity = 40/115 (34.78%), Postives = 67/115 (58.26%), Query Frame = 3

Query:  267 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            ++T L L  ++LSG + PE+     L   ++  N++ G IP +LG L  L  L L +N  +G+IP  L+   SL+ L+L+ N+L+G IP ++  + SL+   +  N + GT P+S
Sbjct:  285 KITSLLLWGNSLSGVIPPEISNCSSLVVFDVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSS 399

HSP 12 Score: 70.8626 bits (172), Expect = 6.585e-12
Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 3

Query:  276 RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL-VFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSG 614
            +LDL  ++ +G +    G L +L  L L  N + G IP  + NL+ L  LDL  N++SG+IP  L ++ SL + L L+ N  TG IP     ++ L+ +D+SSN L G     G
Sbjct:  528 QLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIPQELGQVTSLTINLDLSYNTFTGNIPETFSDLTQLQSLDLSSNSLHGDIKVLG 641

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25
Identity = 68/161 (42.24%), Postives = 90/161 (55.90%), Query Frame = 3

Query:  138 NSEGDALYALRRSLSD-PDNVLQSW--DPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            NS+G  L +L + L   P  V  +W  + +   PC WF ITC+    V  L+   S +SG+L PE+G+L+ LQ L+L  NN  GTIP  LGN   L +LDL  N  S KIP +L  LK L  L L  N LTG++P  L  I  L+V+ +  N+L G  P S
Sbjct:   30 NSDGLTLLSLLKHLDRVPPQVTSTWKINASEATPCNWFGITCDDSKNVASLNFTRSRVSGQLGPEIGELKSLQILDLSTNNFSGTIPSTLGNCTKLATLDLSENGFSDKIPDTLDSLKRLEVLYLYINFLTGELPESLFRIPKLQVLYLDYNNLTGPIPQS 190

HSP 2 Score: 82.4185 bits (202), Expect = 2.187e-15
Identity = 50/147 (34.01%), Postives = 77/147 (52.38%), Query Frame = 3

Query:  171 RSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            R L+   N+L    P  +  C            + R  L  +NLSG L+PE  +   L +L+   NN +G IP  LG+ K+L S++L  N  +G+IPP L  L++L ++ L+ N L G +P +L    SL+  DV  N L G+ P++
Sbjct:  462 RILNLGSNLLHGTIPASIGHC----------KTIRRFILRENNLSG-LLPEFSQDHSLSFLDFNSNNFEGPIPGSLGSCKNLSSINLSRNRFTGQIPPQLGNLQNLGYMNLSRNLLEGSLPAQLSNCVSLERFDVGFNSLNGSVPSN 597

HSP 3 Score: 81.2629 bits (199), Expect = 4.872e-15
Identity = 45/114 (39.47%), Postives = 69/114 (60.53%), Query Frame = 3

Query:  270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            +T L +GN++L G +       ++L  L+L  N  +G +P  LGN  SL +L + + N+SG IP SL  LK+L  L L++NRL+G IP EL   SSL ++ ++ N L G  P++
Sbjct:  245 LTTLFVGNNSLQGPVRFGSPNCKNLLTLDLSYNEFEGGVPPALGNCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSA 358

HSP 4 Score: 79.7221 bits (195), Expect = 1.418e-14
Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = 3

Query:  270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            +T L+L  + LSG +  ELG    L  L+L  N + G IP  LG L+ L SL+L+ N  SG+IP  + K +SL  L +  N LTG++P E+  +  LK+  + +N   G  P
Sbjct:  317 LTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIP 428

HSP 5 Score: 79.337 bits (194), Expect = 1.851e-14
Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = 3

Query:  291 NSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            + NLSG +   LG L++L  L L +N + G+IP ELGN  SL  L L +N + G IP +L KL+ L  L L +NR +G+IP E+    SL  + V  N+L G  P
Sbjct:  300 SGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELP 404

HSP 6 Score: 77.7962 bits (190), Expect = 5.387e-14
Identity = 43/109 (39.45%), Postives = 57/109 (52.29%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            LDL  +   G + P LG    L  L +   N+ GTIP  LG LK+L  L+L  N +SG IP  L    SL  L+LNDN+L G IP  L  +  L+ +++  N   G  P
Sbjct:  272 LDLSYNEFEGGVPPALGNCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIP 380

HSP 7 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 35/114 (30.70%), Postives = 69/114 (60.53%), Query Frame = 3

Query:  270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            ++ ++L  +  +G++ P+LG L++L Y+ L +N ++G++P +L N  SL   D+  N+++G +P + +  K L  L L++NR +G IP+ L  +  L  + ++ N   G  P+S
Sbjct:  532 LSSINLSRNRFTGQIPPQLGNLQNLGYMNLSRNLLEGSLPAQLSNCVSLERFDVGFNSLNGSVPSNFSNWKGLTTLVLSENRFSGGIPQFLPELKKLSTLQIARNAFGGEIPSS 645

HSP 8 Score: 75.8702 bits (185), Expect = 2.047e-13
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 3

Query:  267 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            ++  L+L  +  SG +  E+ K + L  L +Y+NN+ G +PVE+  +K L    L+NN+  G IPP L    SL  +    N+LTG+IP  L     L+++++ SN L GT P S
Sbjct:  364 KLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIPPGLGVNSSLEEVDFIGNKLTGEIPPNLCHGRKLRILNLGSNLLHGTIPAS 478

HSP 9 Score: 75.485 bits (184), Expect = 2.673e-13
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            L L ++ L G +   LGKL  L+ LEL++N   G IP+E+   +SL  L +Y NN++G++P  + ++K L    L +N   G IP  L   SSL+ VD   N L G  P
Sbjct:  344 LKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIPPGLGVNSSLEEVDFIGNKLTGEIP 452

The following BLAST results are available for this feature:

BLAST of CF417565 vs. ExPASy Swiss-Prot

BLAST of CF417565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114


Match Name	E-value	Identity	Description
BAK1_ARATH	5.145e-57	64.60	BRASSINOSTEROID INSENSITIVE 1-associated receptor ...	[more]
SERK1_ARATH	4.356e-56	65.22	Somatic embryogenesis receptor kinase 1 OS=Arabido...	[more]
SERK2_ARATH	7.430e-56	63.35	Somatic embryogenesis receptor kinase 2 OS=Arabido...	[more]
SERK4_ARATH	1.110e-51	62.80	Somatic embryogenesis receptor kinase 4 OS=Arabido...	[more]
SERK5_ARATH	8.234e-47	60.00	Somatic embryogenesis receptor kinase 5 OS=Arabido...	[more]
Y5129_ARATH	1.667e-31	45.57	Probable LRR receptor-like serine/threonine-protei...	[more]
Y2239_ARATH	2.253e-28	42.31	Probable LRR receptor-like serine/threonine-protei...	[more]
Y5457_ARATH	5.018e-28	41.67	Probable LRR receptor-like serine/threonine-protei...	[more]
Y1341_ARATH	1.614e-26	39.24	Probable LRR receptor-like serine/threonine-protei...	[more]
PEPR1_ARATH	1.046e-25	42.24	Leucine-rich repeat receptor-like protein kinase P...	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_115000-495 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_F09 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417565 ID=CF417565; Name=CF417565; organism=Citrus sinensis; type=EST; length=649bp
GAGAGAGAGAGAGAGCCATGGCGGCGGCGGCGGCGGCGGCGGAAGCGGCA
GTGCAGTGGTTGAGTGTGTGTATAACGTTCAGCATAAGCCTAATAATAAT
AATAGGGAGCAGCAGCTTGGTGGCGGTGGCGAGTGGAAACTCGGAAGGGG
ACGCGCTGTACGCGCTCAGGAGAAGCTTATCAGATCCCGATAACGTGCTT
CAGAGCTGGGATCCAACTCTCGTCAATCCCTGCACTTGGTTTCACATAAC
CTGTAATCAGGACAACCGCGTTACTCGACTGGATTTGGGTAATTCAAATC
TATCCGGCCGTCTCGTCCCTGAACTGGGCAAGCTCGAGCATTTGCAATAC
CTGGAACTTTACAAAAACAACATCCAAGGAACTATCCCTGTCGAGCTCGG
TAACTTGAAGAGCCTCATCAGCTTGGACTTGTATAATAACAACATCTCGG
GGAAAATCCCTCCTTCCTTGGCTAAATTGAAATCTCTTGTTTTTTTGCGG
CTTAACGATAATCGGCTAACTGGACAAATTCCCAGGGAACTTGTTGGAAT
TTCAAGTCTCAAAGTTGTGGATGTTTCNAGCAATGATCTGTGTGGAACAN
TTCCTACAAGCGGACCATTTGAACACATCCCACTCAACACTTTGAGAAT