CF417583
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.648e-18 Identity = 46/64 (71.88%), Postives = 54/64 (84.38%), Query Frame = 3 Query: 33 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 215 MATSTMALSSS F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYGPDRVKYLGPFS Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFS 64
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.152e-18 Identity = 46/64 (71.88%), Postives = 54/64 (84.38%), Query Frame = 3 Query: 33 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 215 MA STMALSS SF GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFS Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFS 64
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.152e-18 Identity = 44/63 (69.84%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 33 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 215 MA ST ALSS F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFS Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFS 63
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.795e-18 Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 33 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 215 MA ST ALSS F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLGPFS Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFS 63
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.822e-17 Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 3 Query: 33 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 215 MA +TMALSS SF G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGPFS Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFS 62
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.108e-17 Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 3 Query: 33 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 215 MA +TMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGPFS Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFS 62
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.059e-17 Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 3 Query: 33 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 215 MA STMALSSS F GKAV L+PS +E++ G+++MRKT SK+ VSS SPWYGP+RVKYLGPFS Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFS 64
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.301e-17 Identity = 43/64 (67.19%), Postives = 54/64 (84.38%), Query Frame = 3 Query: 33 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 215 MA +TMALSSS F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYGPDRVKYLGPFS Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFS 64
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.042e-17 Identity = 43/64 (67.19%), Postives = 52/64 (81.25%), Query Frame = 3 Query: 33 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 215 MA +TMALSSS F GK V L+PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFS Sbjct: 1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFS 64
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.181e-16 Identity = 46/62 (74.19%), Postives = 50/62 (80.65%), Query Frame = 3 Query: 33 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 215 MA STMALSSS G+A+ LAPS EL G R+SMRKT K+VSSGSPWYGPDRVKYLGPFS Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPELGVG-RVSMRKTAPKTVSSGSPWYGPDRVKYLGPFS 61 The following BLAST results are available for this feature:
BLAST of CF417583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417583 ID=CF417583; Name=CF417583; organism=Citrus sinensis; type=EST; length=217bpback to top |