CF417599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL6_ARATH (Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana GN=YSL6 PE=2 SV=2) HSP 1 Score: 270.396 bits (690), Expect = 1.779e-79 Identity = 143/208 (68.75%), Postives = 165/208 (79.33%), Query Frame = 1 Query: 58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNE-IQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 L + DFKGLYGYKVFIAI++ILGDGLYNL+KII+VT KELC+ R++ LPI + + D+E+S +L+ +KKR+ VFLKD IP FA +GYVGLAAISTATIP IF FCNSYG GLTD SL+ TY KIGLFIIAS+VG++GGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQL+GTA G Sbjct: 308 LGSNDFKGLYGYKVFIAIAIILGDGLYNLVKIIAVTVKELCSSRSRRLNLPIVTDGVDDSEASEILLVKKKRDEVFLKDRIPLEFAIAGYVGLAAISTATIPIIFPPLKWYFVLCSYFIAPALAFCNSYGTGLTDWSLASTYGKIGLFIIASVVGSDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMG 515 HSP 2 Score: 45.8246 bits (107), Expect = 1.779e-79 Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDLG 62 G LWP++SQHAGDWYP DLG Sbjct: 290 GILWPFVSQHAGDWYPADLG 309
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL4_ARATH (Probable metal-nicotianamine transporter YSL4 OS=Arabidopsis thaliana GN=YSL4 PE=2 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 7.336e-78 Identity = 140/204 (68.63%), Postives = 159/204 (77.94%), Query Frame = 1 Query: 70 DFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQD-TESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 DFKGLYGYKVFIAIS+ILGDGLYNLIKII VT KE+CNK ++ LP+ +I D +++S L+ ++KKR+ +FLKD IP FA SGYVGLAAISTA IP IF FCNSYGAGLTD S+ TY K GLFI+AS+VG NGGVIAGLAACG+MMSIVSTAADLMQDFKTGYLTLSSAKSMFV+QLLGTA G Sbjct: 309 DFKGLYGYKVFIAISIILGDGLYNLIKIIVVTVKEICNKSSRQHNLPVFTDILDKSKTSVLMREKKKRDIIFLKDRIPLEFAVSGYVGLAAISTAIIPLIFPPLKWYFVLCSYLVAPGLAFCNSYGAGLTDMSMPSTYGKTGLFIVASIVGNNGGVIAGLAACGIMMSIVSTAADLMQDFKTGYLTLSSAKSMFVTQLLGTAMG 512 HSP 2 Score: 46.2098 bits (108), Expect = 7.336e-78 Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 GFLWP+ISQHAGDWYP DL Sbjct: 287 GFLWPFISQHAGDWYPADL 305
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL6_ORYSJ (Probable metal-nicotianamine transporter YSL6 OS=Oryza sativa subsp. japonica GN=YSL6 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 5.616e-75 Identity = 134/207 (64.73%), Postives = 154/207 (74.40%), Query Frame = 1 Query: 58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 L + DFKGLYGYKVFI++S+ILGDGLYNLIKII T KE+ N R+K +LP+ D E S+L ++K R + FLKD IP+W A SGYVGLAAISTAT+P IF FCNSYG GLTD +L+ TY KIGLFI ASLVG +GGVIAGLAACGVMMSIVSTAADLMQDF+TGYLTLSS +SMFVSQL+GT G Sbjct: 311 LGSNDFKGLYGYKVFISVSVILGDGLYNLIKIIYATIKEVMNARSKQGRLPLVRVHDDDEGSKLSAEEKLRNDTFLKDRIPSWLAGSGYVGLAAISTATVPMIFPQVKWYLVLCAYVVAPLLAFCNSYGCGLTDWNLASTYGKIGLFIFASLVGRSGGVIAGLAACGVMMSIVSTAADLMQDFRTGYLTLSSPRSMFVSQLIGTTLG 517 HSP 2 Score: 42.3578 bits (98), Expect = 5.616e-75 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDLG 62 GFLWPYIS AGDWYP +LG Sbjct: 293 GFLWPYISTKAGDWYPANLG 312
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL5_ORYSJ (Probable metal-nicotianamine transporter YSL5 OS=Oryza sativa subsp. japonica GN=YSL5 PE=2 SV=3) HSP 1 Score: 251.136 bits (640), Expect = 1.620e-71 Identity = 123/207 (59.42%), Postives = 154/207 (74.40%), Query Frame = 1 Query: 58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 L+N DF+GLYGYKVFIAIS+ILGDGLYNL+K+ + KE+CN R+K LP+ +QD +SSR L+D+K++ +FLKD IPTW A SGY+ LAAIST +P IF FCNSYG GLT+ +L+ TY KI LF+ ASLVG++GGVIAGLAACGV+MSIV + ADLMQDFK+GYLTLSS +SMF+SQ++G A G Sbjct: 300 LSNTDFRGLYGYKVFIAISVILGDGLYNLVKVFLIIAKEICNARSKEHDLPVQALLQDDDSSRQLLDEKRQTEIFLKDSIPTWLAVSGYIVLAAISTVAVPIIFPQLKWYLVLVCYFLAPAIAFCNSYGMGLTNLNLAPTYGKIALFVFASLVGSDGGVIAGLAACGVIMSIVCSTADLMQDFKSGYLTLSSPRSMFISQMIGVALG 506 HSP 2 Score: 38.5058 bits (88), Expect = 1.620e-71 Identity = 13/19 (68.42%), Postives = 17/19 (89.47%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 GFLWP+I++ AGDWYP +L Sbjct: 282 GFLWPFIAKQAGDWYPDNL 300
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL7_ARATH (Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana GN=YSL7 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 9.834e-53 Identity = 107/208 (51.44%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVG-TNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 L++ GL GY+VFIAI++ILGDGLYN IK++ T L + LPI N+ T + D K+R +FLKD IP+WFA +GYV LA +S T+P IF FCN+YG GLTD SL+ TY K+ +F I + G +NGGV+AGLAACGVMM+IVSTA+DLMQDFKTGY+TL+S +SMF+SQ +GTA G Sbjct: 310 LSSTSLHGLQGYRVFIAIAMILGDGLYNFIKVLGRTVFGLYKQFKNKDVLPI-NDHTSTAPVTISYDDKRRTELFLKDRIPSWFAVTGYVVLAIVSIITVPHIFHQLKWYHILIMYIIAPVLAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGASNGGVLAGLAACGVMMNIVSTASDLMQDFKTGYMTLASPRSMFLSQAIGTAMG 516 HSP 2 Score: 26.5646 bits (57), Expect = 9.834e-53 Identity = 9/19 (47.37%), Postives = 10/19 (52.63%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G +WP I G WY DL Sbjct: 292 GVMWPLIGAQKGKWYAADL 310
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL5_ARATH (Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana GN=YSL5 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 4.020e-51 Identity = 108/209 (51.67%), Postives = 137/209 (65.55%), Query Frame = 1 Query: 79 GLYGYKVFIAISLILGDGLYNLIKIISVT----FKELCNKRTKVSKLPIDNEIQDTESSRLL----IDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGT-NGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 GL YKVFIA+++ILGDGLYN K++S T F +L T +S+ E +D +S L D ++R FLKD IPTWFA GY+ +AA STA +P +F FCN+YGAGLTD SL+ TY K+ +F I + G+ +GG++AGLAACGVMM+IVSTA+DL QDFKTGYLTLSS KSMFVSQ++GTA G Sbjct: 334 GLQAYKVFIAVAIILGDGLYNFCKVLSRTLSGLFVQLRGPTTSISRTSFTLE-EDPHASPLSPKQSYDDQRRTRFFLKDQIPTWFAVGGYITIAATSTAILPHMFHQLRWYYILVIYICAPVLAFCNAYGAGLTDWSLASTYGKLAIFTIGAWAGSEHGGMLAGLAACGVMMNIVSTASDLTQDFKTGYLTLSSPKSMFVSQVIGTAMG 541 HSP 2 Score: 27.7202 bits (60), Expect = 4.020e-51 Identity = 8/19 (42.11%), Postives = 12/19 (63.16%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G +WP I GDW+P ++ Sbjct: 309 GIMWPLIETKKGDWFPDNV 327
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL13_ORYSJ (Probable metal-nicotianamine transporter YSL13 OS=Oryza sativa subsp. japonica GN=YSL13 PE=2 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 8.902e-51 Identity = 103/210 (49.05%), Postives = 138/210 (65.71%), Query Frame = 1 Query: 58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCN--KRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVG-TNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 L + G+ GY+VFIAI+LILGDGLYN +K+I +T L + K+ S LP+ ++ T ++ + D+++R +F+KD IP + A GY +AAIS T+P I FCN+YG GLTD SL TY K+ +F + G ++GGV+AGLAACGVMM+IVSTAADLMQDFKTGYLTL+S +SMFVSQ++GTA G Sbjct: 342 LPDGSLHGMQGYRVFIAIALILGDGLYNFLKMIILTAFSLRSQIKKKNASTLPVSDDGMVTTTAAVSYDEERRNELFVKDQIPWYVAYGGYAVVAAISIGTVPQIIPQLKWYQILVAYIVAPILAFCNAYGTGLTDWSLVTTYGKLAIFAFGAWTGASHGGVLAGLAACGVMMNIVSTAADLMQDFKTGYLTLASPRSMFVSQVIGTAMG 551 HSP 2 Score: 28.8758 bits (63), Expect = 8.902e-51 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G +WP I++ GDW+ DL Sbjct: 324 GIMWPLIAKKRGDWFSADL 342
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL10_ORYSJ (Probable metal-nicotianamine transporter YSL10 OS=Oryza sativa subsp. japonica GN=YSL10 PE=2 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 9.672e-50 Identity = 97/203 (47.78%), Postives = 132/203 (65.02%), Query Frame = 1 Query: 76 KGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNK-RTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLV-GTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 +G+ GY+VFI+ISLILGDGLYN +K+++ T L + R +S+ + ++ D K+R +FLKD IP W A S YV +A +S AT+P IF FCN+YG GLTD SL+ TY K+ +F + + ++GG+IAGLAACGVM+ IVSTA+DL QDFKTGY+TL+S +SMFVSQ++GTA G Sbjct: 309 RGIVGYRVFISISLILGDGLYNFLKVMTRTTTALVMQVRAMMSEPTLPVSGGGGQTPEETFDDKRRTELFLKDQIPNWLALSAYVVIAVVSIATVPRIFHQLRWYHVAVSYVVAPVLAFCNAYGCGLTDWSLATTYGKLAIFTVGAWADASDGGIIAGLAACGVMIGIVSTASDLTQDFKTGYMTLASPRSMFVSQVIGTAMG 511 HSP 2 Score: 32.7278 bits (73), Expect = 9.672e-50 Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G +WP I GDWYP DL Sbjct: 285 GIMWPLIEHKKGDWYPADL 303
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL8_ARATH (Probable metal-nicotianamine transporter YSL8 OS=Arabidopsis thaliana GN=YSL8 PE=1 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 2.790e-49 Identity = 103/209 (49.28%), Postives = 135/209 (64.59%), Query Frame = 1 Query: 79 GLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNK-RTKVSKLPIDNEIQDTESS-------RLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTN-GGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 GL YKVFIA++ ILGDGLYN K++ TF L ++ R K +D +S R+ D ++R FLKD IP+WFA GYV ++A+STA +P +F FCN+YGAGLTD SL+ TY K+ +F I + G++ GG++AGLAACGVMM+IVSTA+DL QDFKTGYLTLSS ++MFVSQ++GTA G Sbjct: 343 GLQAYKVFIAVATILGDGLYNFCKVLIRTFSGLISQIRGKAGSRSSLAHKEDPPASPASPLTPRISYDDQRRTRFFLKDQIPSWFAVGGYVVISAVSTAILPHMFSQLRWYYIIVIYIFAPILAFCNAYGAGLTDWSLASTYGKLAIFTIGAWAGSDHGGLLAGLAACGVMMNIVSTASDLTQDFKTGYLTLSSPRAMFVSQVIGTAMG 551 HSP 2 Score: 28.1054 bits (61), Expect = 2.790e-49 Identity = 8/19 (42.11%), Postives = 12/19 (63.16%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G +WP I GDW+P ++ Sbjct: 318 GLMWPLIETRKGDWFPSNV 336
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL12_ORYSJ (Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica GN=YSL12 PE=2 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 3.362e-49 Identity = 107/223 (47.98%), Postives = 139/223 (62.33%), Query Frame = 1 Query: 16 PISPNMLVTGIXLTLANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLL-IDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVG-TNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 P+ N + +L+ GL GY+VFI+I+LILGDGLYN +K++ T K S LP+ N ++ + D ++R +FLKD IP A GYV +AA+S T+P IF FCN+YGAGLTD SL+ TY K+ +FI + G +NGGV+ GLAACGVMMSIVSTA+DLMQDFKTGYLTL+S +SMFVSQ++GTA G Sbjct: 324 PLIRNKKGSWYAASLSETSLHGLQGYRVFISIALILGDGLYNFVKVLIRTTAGFVVMMKKNSTLPVSNNGSPMVATEAISFDDERRTELFLKDQIPKTVAFGGYVAVAAVSIGTLPQIFPQLKWYYILVAYVFAPVLAFCNAYGAGLTDWSLASTYGKLAIFIFGAWAGASNGGVLVGLAACGVMMSIVSTASDLMQDFKTGYLTLASPRSMFVSQVIGTAMG 546 The following BLAST results are available for this feature:
BLAST of CF417599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417599 ID=CF417599; Name=CF417599; organism=Citrus sinensis; type=EST; length=684bpback to top |