CF417612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.393e-57 Identity = 105/184 (57.07%), Postives = 136/184 (73.91%), Query Frame = 1 Query: 1 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKRN 552 YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E T+LE A+ +K L+ EI+ + DDP++RKPDI KAK +LGWEP V L +GL FR L N Sbjct: 218 YWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 401
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.393e-57 Identity = 105/184 (57.07%), Postives = 136/184 (73.91%), Query Frame = 1 Query: 1 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKRN 552 YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E T+LE A+ +K L+ EI+ + DDP++RKPDI KAK +LGWEP V L +GL FR L N Sbjct: 218 YWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 401
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.393e-57 Identity = 105/184 (57.07%), Postives = 136/184 (73.91%), Query Frame = 1 Query: 1 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKRN 552 YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E T+LE A+ +K L+ EI+ + DDP++RKPDI KAK +LGWEP V L +GL FR L N Sbjct: 218 YWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 401
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.393e-57 Identity = 105/184 (57.07%), Postives = 136/184 (73.91%), Query Frame = 1 Query: 1 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKRN 552 YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GEPLTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E T+LE A+ +K L+ EI+ + DDP++RKPDI KAK +LGWEP V L +GL FR L N Sbjct: 218 YWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 401
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.473e-55 Identity = 101/178 (56.74%), Postives = 132/178 (74.16%), Query Frame = 1 Query: 1 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRL 534 YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GE LTV G QTR+F YVSD+V+GL+ LM + PVN+GNP E ++++ A +K+L+ EI + DDP++RKPDI KAK LLGWEP V L +GL FR L Sbjct: 219 YWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKEL 396
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 3.212e-54 Identity = 98/167 (58.68%), Postives = 129/167 (77.25%), Query Frame = 1 Query: 1 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 501 YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+G RM+++DGRVVSNFI QAL+GE LTV G+QTR+F YVSD+V+GL+ LM + PVN+GNP E T+LE A+ +K L+ I+ + DDP++R+PDI KAK LLGWEP V L +GL Sbjct: 216 YWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGL 382
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: GME2_ORYSJ (GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.659e-16 Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 19 PIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGR--VVSNFIAQALRG-EPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 501 P + Y K E L Y + GI+ R+ R N YGP GR + F +AL + + G QTRSF ++ + V+G++RL + + PVNIG+ +M E+AE V N ++ I + P+ R R D + KE LGW P ++L+DGL Sbjct: 161 PAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMRLKDGL 323
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: GME1_ORYSJ (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.723e-15 Identity = 54/164 (32.93%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 19 PIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGR--VVSNFIAQALRG-EPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 501 P + Y K E L Y + GI+ R+ R N YGP GR + F +A + + G QTRSF ++ + V+G++RL + + PVNIG+ +M E+AE + + E+ I + P+ R R D + KE LGW P +KL+DGL Sbjct: 168 PAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMKLKDGL 330
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: GME1_ORYSI (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.723e-15 Identity = 54/164 (32.93%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 19 PIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGR--VVSNFIAQALRG-EPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 501 P + Y K E L Y + GI+ R+ R N YGP GR + F +A + + G QTRSF ++ + V+G++RL + + PVNIG+ +M E+AE + + E+ I + P+ R R D + KE LGW P +KL+DGL Sbjct: 168 PAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMKLKDGL 330
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase ytcB OS=Bacillus subtilis GN=ytcB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.014e-15 Identity = 51/158 (32.28%), Postives = 77/158 (48.73%), Query Frame = 1 Query: 34 SCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENT--GPVNIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 501 S Y K E L Y + GI I I R F YGPR D I Q L+ +PLT+ G Q+R F Y+SD V G+ ++ + VNIG ++L++ ++++ + + + +P DISKAK+LL ++P L+DGL Sbjct: 147 SPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGPRQRPD--MAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGITAVLGKPHLIGETVNIGGAERASVLKVVSLIEDISGRKATLHFSDKIAGEPSNTWADISKAKQLLHYDPATSLKDGL 302 The following BLAST results are available for this feature:
BLAST of CF417612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417612 ID=CF417612; Name=CF417612; organism=Citrus sinensis; type=EST; length=654bpback to top |