CF417629

Overview
NameCF417629
Unique NameCF417629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11860 contig Csv1_Contig11860:96..763. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SRK2A_ARATH (Serine/threonine-protein kinase SRK2A OS=Arabidopsis thaliana GN=SRK2A PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.090e-65
Identity = 120/139 (86.33%), Postives = 128/139 (92.09%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKENPTFSLQSVEEITKIVEEAKVPPPVSRSI 419
            LSRREYDGK+ADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI +IMAVQYKIPDYVHISQDC+NLLSRIFVAN  +RITI EIK H WFLKNLPRELTE AQA Y++KENPTFSLQ+VEEI KIV +AK PPPVSRSI
Sbjct:  171 LSRREYDGKMADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIQKIMAVQYKIPDYVHISQDCKNLLSRIFVANSLKRITIAEIKKHSWFLKNLPRELTETAQAAYFKKENPTFSLQTVEEIMKIVADAKTPPPVSRSI 309          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SRK2B_ARATH (Serine/threonine-protein kinase SRK2B OS=Arabidopsis thaliana GN=SRK2B PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.020e-63
Identity = 118/139 (84.89%), Postives = 127/139 (91.37%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKENPTFSLQSVEEITKIVEEAKVPPPVSRSI 419
            LSR EYDGK+ADVWSCGVTLYVMLVGAYPFEDQEDPKNF+KTI RIMAV+YKIPDYVHISQDC++LLSRIFV N ++RITI +IK HPWFLKNLPRELTE AQA Y+RKENPTFSLQSVEEI KIVEEAK P  VSRSI
Sbjct:  171 LSRGEYDGKMADVWSCGVTLYVMLVGAYPFEDQEDPKNFKKTIQRIMAVKYKIPDYVHISQDCKHLLSRIFVTNSNKRITIGDIKKHPWFLKNLPRELTEIAQAAYFRKENPTFSLQSVEEIMKIVEEAKTPARVSRSI 309          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SAPK7_ORYSJ (Serine/threonine-protein kinase SAPK7 OS=Oryza sativa subsp. japonica GN=SAPK7 PE=2 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.247e-61
Identity = 111/141 (78.72%), Postives = 128/141 (90.78%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKEN--PTFSLQSVEEITKIVEEAKVPPPVSRSI 419
            LSRREYDGK ADVWSCGVTLYVMLVGAYPFED +DPKNFRKTI RIM++QYKIP+YVH+SQDCR LLSRIFVANP++RITI+EI++HPWFLKNLPRELTE AQA+YY+K+N  PT+S+QSVEEI KIVEEA+ PP  S  +
Sbjct:  171 LSRREYDGKTADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTIGRIMSIQYKIPEYVHVSQDCRQLLSRIFVANPAKRITIREIRNHPWFLKNLPRELTEAAQAMYYKKDNSAPTYSVQSVEEIMKIVEEARTPPRSSTPV 311          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SRK2H_ARATH (Serine/threonine-protein kinase SRK2H OS=Arabidopsis thaliana GN=SRK2H PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.072e-60
Identity = 108/139 (77.70%), Postives = 124/139 (89.21%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKENPTFSLQSVEEITKIVEEAKVPPPVSRSI 419
            LSRREYDGK ADVWSCGVTLYVMLVG YPFED +DP+NFRKTI RIMAVQYKIPDYVHISQ+CR+LLSRIFV N ++RIT+KEIK HPW+LKNLP+ELTEPAQA YY++E P+FSLQSVE+I KIV EA+ P P S ++
Sbjct:  171 LSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAV 309          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SAPK6_ORYSJ (Serine/threonine-protein kinase SAPK6 OS=Oryza sativa subsp. japonica GN=SAPK6 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.012e-60
Identity = 109/141 (77.30%), Postives = 127/141 (90.07%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKENP--TFSLQSVEEITKIVEEAKVPPPVSRSI 419
            LSRREYDGK+ADVWSCGVTLYVMLVGAYPFED +DPKNFRKTI RI+++QYKIP+YVHISQDCR LLSRIFVANP++RITI+EI++HPWF+KNLPRELTE AQA YY+K+N   TFS Q+V+EI KIV+EAK PPP S  +
Sbjct:  171 LSRREYDGKMADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTIGRIVSIQYKIPEYVHISQDCRQLLSRIFVANPAKRITIREIRNHPWFMKNLPRELTEAAQAKYYKKDNSARTFSDQTVDEIMKIVQEAKTPPPSSTPV 311          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SAPK4_ORYSJ (Serine/threonine-protein kinase SAPK4 OS=Oryza sativa subsp. japonica GN=SAPK4 PE=2 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 2.201e-58
Identity = 109/140 (77.86%), Postives = 124/140 (88.57%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKEN--PTFSLQSVEEITKIVEEAKVPPPVSRS 416
            LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQ+DPKN RKTI RIM+VQYKIPDYVHIS +C+ L++RIFV NP RRIT+KEIKSHPWFLKNLPRELTE AQA+YYR++N  P+FS Q+ EEI KIV+EA+  P  SR+
Sbjct:  171 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNIRKTIQRIMSVQYKIPDYVHISAECKQLIARIFVNNPLRRITMKEIKSHPWFLKNLPRELTETAQAMYYRRDNSVPSFSDQTSEEIMKIVQEARTMPKSSRT 310          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SRK2G_ARATH (Serine/threonine-protein kinase SRK2G OS=Arabidopsis thaliana GN=SRK2G PE=1 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 5.995e-56
Identity = 104/139 (74.82%), Postives = 122/139 (87.77%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKENPTFSLQSVEEITKIVEEAKVPPPVSRSI 419
            LSRREYDGK ADVWSCGVTLYVMLVGAYPFED  DPKNFRKTI RIMAVQYKIPDYVHISQ+C++LLSRIFV N ++RIT+KEIK+HPW+LKNLP+EL E AQA YY+++  +FSLQSVE+I KIV EA+ P P + ++
Sbjct:  171 LSRREYDGKHADVWSCGVTLYVMLVGAYPFEDPNDPKNFRKTIQRIMAVQYKIPDYVHISQECKHLLSRIFVTNSAKRITLKEIKNHPWYLKNLPKELLESAQAAYYKRDT-SFSLQSVEDIMKIVGEARNPAPSTSAV 308          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SAPK5_ORYSJ (Serine/threonine-protein kinase SAPK5 OS=Oryza sativa subsp. japonica GN=SAPK5 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.328e-54
Identity = 104/153 (67.97%), Postives = 120/153 (78.43%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKEN--------------PTFSLQSVEEITKIVEEAKVPPPVSRSI 419
            LSRREYDGKLADVWSCGVTLYVMLVGAYPFED +DPKNFRKTISRIM+VQYKIP+YVH+SQ CR+LLSRIFVANP +RI++ EIKSHPWFLKNLPREL E AQA+YY +                  FS QSVE+I +IV+EA+  P   + +
Sbjct:  171 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDPKDPKNFRKTISRIMSVQYKIPEYVHVSQPCRHLLSRIFVANPYKRISMGEIKSHPWFLKNLPRELKEEAQAVYYNRRGADHAASSASSAAAAAAFSPQSVEDIMRIVQEAQTVPKPDKPV 323          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SRK2J_ARATH (Serine/threonine-protein kinase SRK2J OS=Arabidopsis thaliana GN=SRK2J PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.996e-51
Identity = 100/139 (71.94%), Postives = 111/139 (79.86%), Query Frame = 3
Query:    9 RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKENP--TFSLQSVEEITKIVEEAKVPPPVSRSI 419
            R EYDGK  DVWSCGV LYVMLVGAYPFED +DP+NFRKT+ +IMAV YKIP YVHIS+DCR LLSRIFVANP  R T+KEIKSH WFLKNLPREL EPAQAIYY++      FS Q VEEI KIV EA+  P +SR +
Sbjct:  173 RSEYDGKSVDVWSCGVALYVMLVGAYPFEDPKDPRNFRKTVQKIMAVNYKIPGYVHISEDCRKLLSRIFVANPLHRSTLKEIKSHAWFLKNLPRELKEPAQAIYYQRNVNLINFSPQRVEEIMKIVGEARTIPNLSRPV 311          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SAPK3_ORYSJ (Serine/threonine-protein kinase SAPK3 OS=Oryza sativa subsp. japonica GN=SAPK3 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.025e-47
Identity = 91/132 (68.94%), Postives = 110/132 (83.33%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKENPTFSLQSVEEITKIVEEAKVP 398
            LSR+EYDGK+ADVWSCGVTLYVMLVG+YPFED  DP+NFRKTISRI+ VQY IPDYV +S DCR LLS+IFVA+PS+RITI EIK H WFLKNLP+E++E  +A  Y+  +     Q+VEEI +I++EAKVP
Sbjct:  172 LSRKEYDGKVADVWSCGVTLYVMLVGSYPFEDPGDPRNFRKTISRILGVQYSIPDYVRVSSDCRRLLSQIFVADPSKRITIPEIKKHTWFLKNLPKEISEREKA-DYKDTDAAPPTQAVEEIMRIIQEAKVP 302          
The following BLAST results are available for this feature:
BLAST of CF417629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
SRK2A_ARATH1.090e-6586.33Serine/threonine-protein kinase SRK2A OS=Arabidops... [more]
SRK2B_ARATH1.020e-6384.89Serine/threonine-protein kinase SRK2B OS=Arabidops... [more]
SAPK7_ORYSJ1.247e-6178.72Serine/threonine-protein kinase SAPK7 OS=Oryza sat... [more]
SRK2H_ARATH3.072e-6077.70Serine/threonine-protein kinase SRK2H OS=Arabidops... [more]
SAPK6_ORYSJ4.012e-6077.30Serine/threonine-protein kinase SAPK6 OS=Oryza sat... [more]
SAPK4_ORYSJ2.201e-5877.86Serine/threonine-protein kinase SAPK4 OS=Oryza sat... [more]
SRK2G_ARATH5.995e-5674.82Serine/threonine-protein kinase SRK2G OS=Arabidops... [more]
SAPK5_ORYSJ7.328e-5467.97Serine/threonine-protein kinase SAPK5 OS=Oryza sat... [more]
SRK2J_ARATH1.996e-5171.94Serine/threonine-protein kinase SRK2J OS=Arabidops... [more]
SAPK3_ORYSJ1.025e-4768.94Serine/threonine-protein kinase SAPK3 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-559 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417629 ID=CF417629; Name=CF417629; organism=Citrus sinensis; type=EST; length=668bp
TTCTTTCTCGGAGAGAATATGATGGCAAGTTGGCGGATGTATGGTCTTGT
GGAGTTACTCTTTATGTTATGCTAGTGGGAGCTTACCCGTTTGAAGACCA
GGAGGACCCGAAGAATTTCAGGAAGACCATTAGTAGAATTATGGCTGTTC
AATACAAGATCCCAGACTATGTTCACATATCTCAAGACTGTAGAAATCTT
CTTTCTCGCATTTTTGTTGCCAATCCGTCAAGGAGAATCACCATTAAAGA
AATCAAGAGCCATCCATGGTTTCTAAAGAACTTGCCCAGGGAACTCACAG
AGCCAGCTCAAGCCATCTACTATAGGAAAGAAAACCCAACCTTTTCCCTC
CAAAGTGTTGAAGAGATCACAAAAATTGTGGAAGAGGCCAAAGTTCCTCC
TCCTGTGTCTCGATCAATCGGAGGCTTTGGCTGGGGAGGAGAAGAAGATG
GTGACGAGAAGGAAGAGGAAACTGATGCAGACGAAGAAGACGAGTATGAG
AAGACGGTCAAGGAGGCTCAGCAAAGTGGAGAAGTTAGCGTCAGTTAAGA
ATTAATTTATCCCTCTTCCAAATATTTGAGTCAAGGATTTTGCCCCTGGG
ATTACCTGTACTTAAGCATGCTTTCTAGTTTCATGTTTGTATAGAGTCAG
TTTTCGATTTAGGACCTG
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