CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8368 contig Csv1_Contig8368:62..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 8.660e-40
Identity = 102/263 (38.78%), Postives = 148/263 (56.27%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---MPQGSPR--SADDIFSEYFDFTI---PHXXXXXXXXXXXXXNEAFGE---------DDVFHSF--------NRVFVVGGP-------KKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEE-ILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            MG DYY+ LG+ R AS D++K+AY + A +++PDK  + +  AE K   + EAY+VLSDP+KR +FD YG   +  GSP   S+       F +T    PH             +  FG+         DD F SF        N  F    P       K+ PP+ + L  +LEE+Y G TKK+KI  K ++ +G +I+ E+ ILTI VK GWK+GT+ITF ++G+   N  PAD+VF++ +KPH++F RDG+D+I    I+
Sbjct:    1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDK--NKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGSPSGGSSGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDTFSSFPMGMGGFTNMNFGRSRPSQEPTRKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARIS 261          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 1.477e-39
Identity = 104/261 (39.85%), Postives = 143/261 (54.79%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP----------------------QGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXX------NEAF---GEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            MG D+YKILG++R AS D++KKAY K+A K++PDK  +   +AE +   + EAYEVLSD +KR +FD YG                         G PR+    F+++F  + P                    NE F   G DD+F +FN        ++ PPIE+ L  +LEE+ KG  KK+KI R     NG   K E++L I VKPGWK GT+ITF ++G+   N  PAD+VFI+ +KPHS+F R+G DL  T  I+
Sbjct:    1 MGKDFYKILGLERKASDDEIKKAYRKLALKYHPDK--NKSPQAEERFKEIAEAYEVLSDKKKRDIFDNYGEDGLKGGQPGPDGGGQPGAYTYQFHGDPRAT---FAQFFGSSDPFGAFFTGGDNMFSGGQGGNTNEIFWNIGGDDMF-AFNAQAPSRKRQQDPPIEHDLFVSLEEVDKGCIKKMKISRMATGSNG-PYKEEKVLRITVKPGWKAGTKITFPQEGDSAPNKTPADIVFIIRDKPHSLFKREGIDLKYTAQIS 254          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 8.105e-38
Identity = 99/265 (37.36%), Postives = 145/265 (54.72%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGM-------PQGSPRSADDIFSEYFDFTI---PHXXXXXXXXXXXXXNEAFGE---------DDVFHSF--------NRVFVVGGP-------KKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEE-ILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            MG DYY+ LG+ R AS +++K+AY + A +++PDK  + +  AE K   + EAY+VLSDP+KR +FD YG        P G      +  S  F +T    PH             +  FG+         DD F  F        N  F    P       K+ PP+ + L  +LEE+Y G TKK+KI  K ++ +G +I+ E+ ILTI VK GWK+GT+ITF ++G+   N  PAD+VF++ +KPH++F RDG+D+I    I+
Sbjct:    1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDK--NKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSSGGTNGTS--FSYTFHGDPHAMFAEFFGGRNPFDNFFGQRNGEEGMDIDDPFSGFPMGMGGFTNMNFGRSRPAQEPTRKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARIS 261          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.059e-37
Identity = 96/270 (35.56%), Postives = 148/270 (54.81%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---MPQGSPRSADDIFSEYFDFT-IPHXXXXXXXXXXXXXNEAFG--------------------EDDVFHSFNRVFVVG---GPKKAP------------PIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEE-ILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            MG DYYKILG+   A+ D++KKAY KMA K++PDK  + +  AE K   + EAY+VLSDP+KR ++D YG   +  G   S     S ++ F   PH             +  F                     +DD F +F R    G   GP++AP            P+ + L  +LEE+Y G+TK++KI R+ ++ +G T++ E+ IL I +K GWK+GT+ITF ++G+   +  PAD+VF++ +KPH+ F RDG +++ +  I+
Sbjct:    1 MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDK--NKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGSSGGSSGSFHYTFHGDPHATFASFFGGSNPFDIFFASSRSARPFSGFDPDDMDVDEDDDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALIS 268          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 155.992 bits (393), Expect = 1.806e-37
Identity = 97/265 (36.60%), Postives = 143/265 (53.96%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQ--------GSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGE---------DDVFHSFNRVFVVGG-----------------PKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEE-ILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            MG DYY+ LG+ R AS +++K+AY + A +++PDK  + +  AE K   + EAY+VLSDP+KR +FD YG           GS   A+     Y     PH             +  FG+         DD F  F     +GG                  K+ PP+ + L  +LEE+Y G TKK+KI  K ++ +G +I+ E+ ILTI VK GWK+GT+ITF ++G+   N  PAD+VF++ +KPH++F RDG+D+I    I+
Sbjct:    1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDK--NKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDPFSGFP--MGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARIS 261          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.080e-37
Identity = 95/270 (35.19%), Postives = 148/270 (54.81%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---MPQGSPRSADDIFSEYFDFT-IPHXXXXXXXXXXXXXNEAFG--------------------EDDVFHSFNRVFVVG---GPKKAP------------PIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEE-ILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            MG DYYKILG+   A+ D++KKAY KMA K++PDK  + +  AE K   + EAY+VLSDP+KR ++D YG   +  G   S     S ++ F   PH             +  F                     ++D F +F R    G   GP++AP            P+ + L  +LEE+Y G+TK++KI R+ ++ +G T++ E+ IL I +K GWK+GT+ITF ++G+   +  PAD+VF++ +KPH+ F RDG +++ +  I+
Sbjct:    1 MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDK--NKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFHGDPHATFASFFGGSNPFDIFFASSRSTRPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALIS 268          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.023e-37
Identity = 95/270 (35.19%), Postives = 149/270 (55.19%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---MPQGSPRSADDIFSEYFDFT-IPHXXXXXXXXXXXXXNEAFG--------------------EDDVFHSFNRVFVVG---GPKKAP------------PIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEE-ILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            MG DYYKILG+   A+ D++KKAY KMA K++PDK  + +  AE K   + EAY+VLSDP+KR+++D YG   +  G   S     S ++ F   PH             +  F                     ++D F +F R    G   GP++AP            P+ + L  +LEE+Y G+TK++KI R+ ++ +G T++ E+ IL I +K GWK+GT+ITF ++G+   +  PAD+VF++ +KPH+ F RDG +++ +  I+
Sbjct:    1 MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDK--NKEPNAEEKFKEIAEAYDVLSDPKKRSLYDQYGEEGLKTGGGSSGGSGGSFHYTFHGDPHATFASFFGGSNPFDIFFASSRSTRPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALIS 268          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.023e-37
Identity = 97/264 (36.74%), Postives = 142/264 (53.79%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP--------------------QGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGED-DVFHSFNRVFVVGGP------------KKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEE-ILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            MG DYY ILG+++ AS +D+KKAY K A K++PDK  +   +AE K   V EAYEVLSDP+KR ++D +G                       G P +    F+ +F  + P              +E    D D F +F   F + G             K+ PP+ + L  +LEE+Y G TK++KI RK ++ +G + + E+ ILTI +K GWK+GT+ITF  +G+   N  PAD+VFI+ +K H  F RDG+++I T  I+
Sbjct:    1 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDK--NKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHAT---FAAFFGGSNPFEIFFGRRMGGGRDSEEMEMDGDPFSAFG--FSMNGYPRDRNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKIS 257          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.254e-37
Identity = 96/264 (36.36%), Postives = 142/264 (53.79%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP--------------------QGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGED-DVFHSFNRVFVVGGP------------KKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEE-ILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            MG DYY ILG+D+ A+ +D+KKAY K A K++PDK  +   +AE K   V EAYEVLSDP+KR ++D +G                       G P +    F+ +F  + P              +E    D D F +F   F + G             K+ PPI + L  +LEE+Y G TK++KI RK ++ +G + + E+ ILTI +K GWK+GT+ITF  +G+   N  PAD+VF++ +K H  F RDG++++ T  I+
Sbjct:    1 MGKDYYHILGIDKGATDEDVKKAYRKQALKFHPDK--NKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHAT---FAAFFGGSNPFEIFFGRRMGGGRDSEEMEIDGDPFSAFG--FSMNGYPRDRNSVGPSRLKQDPPIIHELKVSLEEIYSGCTKRMKISRKRLNPDGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFVIKDKEHPKFKRDGSNIVYTAKIS 257          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.254e-37
Identity = 97/264 (36.74%), Postives = 142/264 (53.79%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP--------------------QGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGED-DVFHSFNRVFVVGGP------------KKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEE-ILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            MG DYY ILG+++ AS +D+KKAY K A K++PDK  +   +AE K   V EAYEVLSDP+KR ++D +G                       G P +    F+ +F  + P              +E    D D F +F   F + G             K+ PP+ + L  +LEE+Y G TK++KI RK ++ +G + + E+ ILTI +K GWK+GT+ITF  +G+   N  PAD+VFI+ +K H  F RDG+++I T  I+
Sbjct:    1 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDK--NKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHAT---FAAFFGGSNPFEIFFGRRMGGGRDSEEMEIDGDPFSAFG--FSMNGYPRDRNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKIS 257          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJB1_MOUSE8.660e-4038.78DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]
DNAJ1_DROME1.477e-3939.85DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNJB1_BOVIN8.105e-3837.36DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
DNJB5_BOVIN1.059e-3735.56DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJB1_HUMAN1.806e-3736.60DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNJB5_HUMAN3.080e-3735.19DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_MOUSE4.023e-3735.19DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB4_PONAB4.023e-3736.74DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_MOUSE5.254e-3736.36DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNJB4_HUMAN5.254e-3736.74DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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