CF417650

Overview
NameCF417650
Unique NameCF417650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5392 contig Csv1_Contig5392:214..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 424.861 bits (1091), Expect = 1.945e-118
Identity = 193/224 (86.16%), Postives = 213/224 (95.09%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLY 673
            ++KLAHF RERIPERVVHARGA+AKGFFE THD+SHLTCAD  RAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+D++GN+ PVFFIRDAIKFPDVIHAFKPNPKSHIQE WRILDFCSH PESL TF+WF+DDVGIPQDYRHMEGFGV ++TL+NK GKV+YVKFHWKPTCGVKCL++D EAV++GG+NHSHATQDLYDSIAAGNYPEWKLY
Sbjct:   48 IDKLAHFTRERIPERVVHARGATAKGFFEVTHDVSHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDIVGNNFPVFFIRDAIKFPDVIHAFKPNPKSHIQESWRILDFCSHFPESLLTFAWFYDDVGIPQDYRHMEGFGVHSYTLINKAGKVNYVKFHWKPTCGVKCLMED-EAVRIGGTNHSHATQDLYDSIAAGNYPEWKLY 270          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.106e-116
Identity = 192/225 (85.33%), Postives = 208/225 (92.44%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +EKLA+F RERIPERVVHARG SAKGFFE THD++ LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFA KFYTREGN+D++GN+ PVFFIRD IKFPDV+HAFKPNPKSHIQEYWRI DFCSH PESLSTF+WFFDDVGIPQDYRHMEGFGV T+ L+NK GKV YVKFHWKPTCGVKCL+DD EA+KVGG+NHSHATQDLYDSIAAGN+PEWKL I
Sbjct:   48 IEKLANFTRERIPERVVHARGMSAKGFFEVTHDVTDLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFATKFYTREGNFDIVGNNFPVFFIRDGIKFPDVVHAFKPNPKSHIQEYWRIFDFCSHHPESLSTFAWFFDDVGIPQDYRHMEGFGVHTYCLINKAGKVTYVKFHWKPTCGVKCLMDD-EAIKVGGANHSHATQDLYDSIAAGNFPEWKLMI 271          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 2.907e-114
Identity = 186/225 (82.67%), Postives = 207/225 (92.00%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            VEK+ +F RERIPERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTP+IVRFSTVIHERGSPET+RDPRGFAVK YTR GNWDL+GN+ PVFFIRD  +FPDVIHAFKPNPKSHIQE WRILD+ SHLPESL+TF+WF+DDVGIP DYRHMEGFGV TFT++NK GK +YVKFHWKPTCGVKCL+ +EEA+++GG NHSHATQDLY+SIAAGNYPEWKLYI
Sbjct:   48 VEKIQNFTRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETIRDPRGFAVKMYTRGGNWDLVGNNFPVFFIRDGTQFPDVIHAFKPNPKSHIQENWRILDYLSHLPESLNTFAWFYDDVGIPTDYRHMEGFGVHTFTMINKEGKANYVKFHWKPTCGVKCLL-EEEAIRIGGENHSHATQDLYESIAAGNYPEWKLYI 271          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 409.453 bits (1051), Expect = 8.457e-114
Identity = 183/225 (81.33%), Postives = 203/225 (90.22%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +EK+AHFARERIPERVVHARGASAKGFFECTHD++ LTCAD  RAPGV+TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGNWDLLGN+ PVFFIRD IKFPDVIHAFKPNP+SH+QEYWR+ DF SHLPESL TF + FDDVG+P DYRHMEGFGV T+T V+  GK  YVKFHWKPTCGV+C++ DEEA  VGG NHSHATQDLYDSIAAG++PEW LY+
Sbjct:   50 IEKVAHFARERIPERVVHARGASAKGFFECTHDVTSLTCADFLRAPGVRTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHLPESLHTFFFLFDDVGVPSDYRHMEGFGVNTYTFVSAAGKAQYVKFHWKPTCGVRCILTDEEAALVGGRNHSHATQDLYDSIAAGSFPEWTLYV 274          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 407.142 bits (1045), Expect = 4.197e-113
Identity = 189/225 (84.00%), Postives = 207/225 (92.00%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            VEKLA+F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSHIQE WRILDF SH PESL  F++ FDD+G+PQDYRHMEG GV T+TL+NK GK HYVKFHWKPTCGVKCL++D EA+KVGG+NHSHATQDLYDSIAAGNYPEWKL+I
Sbjct:   48 VEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFTFLFDDLGVPQDYRHMEGSGVNTYTLINKAGKAHYVKFHWKPTCGVKCLLED-EAIKVGGANHSHATQDLYDSIAAGNYPEWKLFI 271          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA1_RICCO (Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2)

HSP 1 Score: 406.371 bits (1043), Expect = 7.159e-113
Identity = 187/225 (83.11%), Postives = 207/225 (92.00%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +EKLA+F RERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPDV+HAFKPNPKSH+QE WRI DF SH+PESL   ++  DD+GIPQDYRHMEG GV T+TL+NK GKVHYVKFHWKPTCGVKCL+++ EA+KVGGSNHSHATQDLYDSI+AGNYPEWKLYI
Sbjct:   48 IEKLANFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDVVHAFKPNPKSHLQENWRIFDFLSHVPESLHMLTFLLDDLGIPQDYRHMEGSGVNTYTLINKAGKVHYVKFHWKPTCGVKCLLEN-EAIKVGGSNHSHATQDLYDSISAGNYPEWKLYI 271          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 404.06 bits (1037), Expect = 3.553e-112
Identity = 189/225 (84.00%), Postives = 205/225 (91.11%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            VEKLA+F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFF+RD +KFPD++HA KPNPKSHIQE WRILDF SH PESL  FS+ FDDVGIPQDYRHM+GFGV T+TL+NK GK  YVKFHWK TCG KCL+DD EA++VGGSNHSHATQDLYDSIAAGNYPEWKLYI
Sbjct:   48 VEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGLKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFLFDDVGIPQDYRHMDGFGVNTYTLINKAGKAVYVKFHWKTTCGEKCLLDD-EAIRVGGSNHSHATQDLYDSIAAGNYPEWKLYI 271          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 403.29 bits (1035), Expect = 6.061e-112
Identity = 183/225 (81.33%), Postives = 202/225 (89.78%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +EK+AHFARERIPERVVHARGASAKGFFECTHD++ LTCAD  RAPG +TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGNWDLLGN+ PVFFIRD IKFPDVIHAFKPNPKSH+QEYWR+ DF SH PESL TF + FDDVGIP DYRHM+GFGV T+T V++ GK HYVKFHW+PTCGV CL+DD EA  VGG NHSHATQDLYDSI AGN+PEWKL++
Sbjct:   48 LEKIAHFARERIPERVVHARGASAKGFFECTHDVTGLTCADFLRAPGARTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPKSHVQEYWRVFDFLSHHPESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVSRAGKSHYVKFHWRPTCGVSCLMDD-EATLVGGKNHSHATQDLYDSIDAGNFPEWKLFV 271          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 402.519 bits (1033), Expect = 1.034e-111
Identity = 186/225 (82.67%), Postives = 206/225 (91.56%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            VEKLA+F RERIPERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFF+RD +KFPD++HA KPNPKSHIQE WRILDF SH PESL  FS+ FDD+G+PQDYRHMEG GV T+ L+NK GK HYVKFHWKPTCGVKCL+ +EEA+KVGG+NHSHAT+DLYDSIAAGNYPEWKL+I
Sbjct:   48 VEKLANFDRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFLFDDLGVPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLL-EEEAIKVGGANHSHATKDLYDSIAAGNYPEWKLFI 271          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 1.350e-111
Identity = 181/225 (80.44%), Postives = 201/225 (89.33%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +EK+AHFARERIPERVVHARGASAKGFFECTHD++ +TCAD  R+PG QTPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGNWDLLGN+ PVFFIRD IKFPDVIHAFKPNP+SH+QEYWR+ DF SH PESL TF + FDDVGIP DYRHM+GFGV T+T V ++ K  YVKFHWKPTCGV CL+DD EA  VGG NHSHATQDLYDSIAAGN+PEWKL++
Sbjct:   48 IEKVAHFARERIPERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHPESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDD-EATLVGGKNHSHATQDLYDSIAAGNFPEWKLFV 271          
The following BLAST results are available for this feature:
BLAST of CF417650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_AVIMR1.945e-11886.16Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA2_RICCO3.106e-11685.33Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]
CATA_IPOBA2.907e-11482.67Catalase OS=Ipomoea batatas PE=2 SV=1[more]
CATA3_MAIZE8.457e-11481.33Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]
CATA1_GOSHI4.197e-11384.00Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA1_RICCO7.159e-11383.11Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=... [more]
CATA3_SOYBN3.553e-11284.00Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA2_HORVU6.061e-11281.33Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA3_NICPL1.034e-11182.67Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA1_ORYSJ1.350e-11180.44Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-580 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417650 ID=CF417650; Name=CF417650; organism=Citrus sinensis; type=EST; length=677bp
GGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGATTCCAGAACGTGTCG
TCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGTGCACCCATGAT
ATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCTCCAGGGGTTCAGAC
ACCTGTCATTGTTCGCTTCTCCACTGTTATCCATGAGCGGGGCAGCCCTG
AGACACTCAGGGATCCTCGAGGATTTGCAGTCAAGTTTTACACCAGAGAG
GGTAATTGGGATCTTCTGGGTAACAGTATCCCTGTTTTTTTCATCCGTGA
TGCAATCAAATTCCCAGATGTGATCCATGCTTTTAAACCTAATCCAAAGT
CTCACATCCAAGAGTACTGGAGGATCCTCGACTTCTGCTCCCACCTTCCT
GAAAGCTTGTCCACATTTTCCTGGTTCTTTGATGATGTGGGTATTCCACA
AGATTACAGGCACATGGAAGGCTTCGGTGTTCAAACTTTTACACTGGTCA
ATAAGAATGGGAAAGTGCACTATGTGAAATTCCACTGGAAACCAACTTGT
GGAGTTAAGTGTTTGATAGATGATGAAGAAGCAGTAAAGGTTGGTGGATC
TAATCACAGCCACGCTACTCAGGATCTCTACGACTCAATTGCAGCTGGAA
ACTATCCTGAGTGGAAACTCTACATTC
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