CF417651

Overview
NameCF417651
Unique NameCF417651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length380
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF417651 vs. ExPASy Swiss-Prot
Match: AB3F_ARATH (ABC transporter F family member 3 OS=Arabidopsis thaliana GN=ABCF3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.835e-20
Identity = 43/50 (86.00%), Postives = 47/50 (94.00%), Query Frame = 3 
Query:    3 GLVLFQGGILMVSHDEHLISGSVEELWVVSEGKATPFHGTFHDYKKMLQS 152
            GLVLFQGGI MVSHDEHLISGSV+ELWVVS+G+  PFHGTFHDYKK+LQS
Sbjct:  664 GLVLFQGGICMVSHDEHLISGSVDELWVVSDGRIAPFHGTFHDYKKLLQS 713
The following BLAST results are available for this feature:
BLAST of CF417651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AB3F_ARATH6.835e-2086.00ABC transporter F family member 3 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-581 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417651 ID=CF417651; Name=CF417651; organism=Citrus sinensis; type=EST; length=380bp
AAGGCCTTGTTTTGTTCCAAGGAGGGATTCTCATGGTTAGTCACGACGAA
CATCTGATATCTGGAAGTGTAGAGGAGCTATGGGTTGTATCAGAAGGCAA
GGCGACACCGTTCCATGGGACGTTCCACGATTACAAGAAGATGCTTCAGT
CCCGTTAAATATTATAGAGGTTTATTGCGGGAAATCAGAGGGATTTTGAC
ACTTACAATTACAGAACAGCTGAGTTTTTCTCAGTTATACTGAATGGGAT
ATACAAGTCTGTTTATGCTATTAAAAAAAATGTTTTTTTACGAGAATGAG
GCTTGCGGGGGAGCTTTTCTGCTCACTCTTGCCACTGTAATATTTATTTT
TTTATTAATTAATATCAAATGGAAACTATT
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