CF417736

Overview
NameCF417736
Unique NameCF417736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6221 contig Csv1_Contig6221:20..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL1_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus musculus GN=Ppil1 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.867e-54
Identity = 97/151 (64.24%), Postives = 120/151 (79.47%), Query Frame = 2
Query:   65 PPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILR 517
            PP V LETSMG   +ELY+KH+P+TC+NFAEL+RRGYYN +KFHRIIKDF++Q            SIYG  FEDE+ P+LK TGAGIL+MANAGP+TNGSQFF+TLAP   LDGKHTIFGRVC+G+ ++ R+G V+T+  DRP+ DVKIL+
Sbjct:   11 PPNVYLETSMGVIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKILK 161          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL1_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo sapiens GN=PPIL1 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.302e-54
Identity = 96/151 (63.58%), Postives = 120/151 (79.47%), Query Frame = 2
Query:   65 PPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILR 517
            PP V LETSMG   +ELY+KH+P+TC+NFAEL+RRGYYN +KFHRIIKDF++Q            SIYG  FEDE+ P+LK TGAGIL+MANAGP+TNGSQFF+TLAP   LDGKHTIFGRVC+G+ ++ R+G V+T+  DRP+ DVKI++
Sbjct:   11 PPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIK 161          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL1_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos taurus GN=PPIL1 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.302e-54
Identity = 96/151 (63.58%), Postives = 120/151 (79.47%), Query Frame = 2
Query:   65 PPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILR 517
            PP V LETSMG   +ELY+KH+P+TC+NFAEL+RRGYYN +KFHRIIKDF++Q            SIYG  FEDE+ P+LK TGAGIL+MANAGP+TNGSQFF+TLAP   LDGKHTIFGRVC+G+ ++ R+G V+T+  DRP+ DVKI++
Sbjct:   11 PPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIK 161          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.671e-52
Identity = 99/152 (65.13%), Postives = 119/152 (78.29%), Query Frame = 2
Query:   71 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSV 526
            +VT +TSMGSFTVELY  H+P+TC+NFA L++RGYYNN  FHRII +F+VQ            SIYG  FEDEI+ +LKHTGAGILSMAN+GPNTNGSQFFITLAP   LDGKHTIFGRV  GM +I+R+G V+T+ +DRP+ +VKILR  V
Sbjct:    4 DVTFDTSMGSFTVELYNSHAPKTCKNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRMGLVKTNNEDRPLDEVKILRAKV 155          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus fumigatus GN=cyp1 PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.488e-52
Identity = 99/152 (65.13%), Postives = 118/152 (77.63%), Query Frame = 2
Query:   71 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSV 526
            +V  +TSMGSFTVELY +H+P+TCRNFA L++RGYYNN  FHRII +F+VQ            SIYG  FEDEI P LKHTGAG+LSMAN+GPNTNGSQFFITLAP   LDGKHTIFGRV  GM VI+R+G V+T+ +DRP+ +VKI+R  V
Sbjct:    4 DVVFDTSMGSFTVELYNEHAPKTCRNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEIHPGLKHTGAGVLSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNSEDRPVDEVKIIRAKV 155          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51
Identity = 97/152 (63.82%), Postives = 119/152 (78.29%), Query Frame = 2
Query:   71 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSV 526
            +V +ET+MG+FT+ELY  H+P+TC+NFA L+ RGYY+++ FHRIIKDF++Q            SIYG  FEDEI P LKHTGAG+LSMANAGPNTNGSQFFITLAP   LDGKHTIFGRV +GM VI+R+G V TDK+DRP  +VKI++  V
Sbjct:    4 DVAVETTMGTFTLELYTNHAPKTCKNFATLADRGYYDSTVFHRIIKDFMIQGGDPTGTGRGGSSIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVKKGMGVIRRMGMVPTDKEDRPATEVKIVKARV 155          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.953e-51
Identity = 97/152 (63.82%), Postives = 118/152 (77.63%), Query Frame = 2
Query:   71 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSV 526
            +V  +TSMGSFTVELY  H+P+TC+NFA L++RGYYNN  FHRII +F+VQ            SIYG  FEDEI+ +LKHTGAGILSMAN+GPNTNGSQFF+TLAP   LDGKHTIFGRV  GM VI+R+G V+T+ +DRP+ +VKI+R  V
Sbjct:    4 DVAFDTSMGSFTVELYNSHAPKTCKNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNGEDRPVDEVKIIRARV 155          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPNG (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus niger GN=cypC PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.037e-51
Identity = 98/152 (64.47%), Postives = 115/152 (75.66%), Query Frame = 2
Query:   71 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSV 526
            +V  +TSMGSFTVELY  H+P+TC+NFA L++RGYYNN  FHRII +F+VQ            SIYG  FEDEI P LKHTGAGILSMAN+GPN NGSQFFITLAP   LDGKHTIFGRV  GM VI+R+G V+T+ +DRP+  VKILR  +
Sbjct:    4 DVAFDTSMGSFTVELYNAHAPKTCKNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEINPNLKHTGAGILSMANSGPNNNGSQFFITLAPQPWLDGKHTIFGRVKSGMRVIQRMGLVKTNSEDRPVDGVKILRARI 155          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL1_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryptococcus neoformans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.116e-49
Identity = 95/160 (59.38%), Postives = 116/160 (72.50%), Query Frame = 2
Query:   53 SDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            S   P  VT +TS+GSFTVELY  H+P+TC NFA+L+ RGYYN   FHRII +F++Q            SIYG  F DEI PEL+  GAGIL+MAN+GPNTNGSQFFIT AP  +LDGKHTIFGRV  GM+ I+RL +V+TDKDDRP+ ++KI R  + D
Sbjct:    2 SGPSPTYVTFDTSVGSFTVELYTAHAPKTCNNFAKLAERGYYNGVIFHRIIPNFMIQGGDPTGTGRGGTSIYGDRFADEIHPELRFVGAGILAMANSGPNTNGSQFFITCAPTPYLDGKHTIFGRVSSGMKTIQRLEAVRTDKDDRPVEEIKIHRARLGD 161          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL1_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Gibberella zeae GN=CYP1 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.991e-48
Identity = 93/151 (61.59%), Postives = 111/151 (73.51%), Query Frame = 2
Query:   74 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSV 526
            + LET+MGS  +ELY  H+P+TC NF  L RRGYY+N+ FHRII +F+VQ            SI+G  FEDEI P LKHTGAGILSMANAGPNTNGSQFF+TLAP   LDGKHTIFGRV  GM  IKR+G V+T  +DRP+ +VKI++  V
Sbjct:    5 IVLETTMGSLILELYTTHAPKTCNNFTTLVRRGYYDNTIFHRIIPNFMVQGGDPTGTGRGGSSIFGEKFEDEIDPGLKHTGAGILSMANAGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMGTIKRMGLVKTGSEDRPVEEVKIVKARV 155          
The following BLAST results are available for this feature:
BLAST of CF417736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
PPIL1_MOUSE4.867e-5464.24Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus ... [more]
PPIL1_HUMAN8.302e-5463.58Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo... [more]
PPIL1_BOVIN8.302e-5463.58Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos ... [more]
PPIL1_EMENI2.671e-5265.13Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]
PPIL1_ASPFU3.488e-5265.13Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_NEUCR1.015e-5163.82Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIL1_ASPOR2.953e-5163.82Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_ASPNG5.037e-5164.47Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_CRYNE2.116e-4959.38Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryp... [more]
PPIL1_GIBZE3.991e-4861.59Peptidyl-prolyl cis-trans isomerase-like 1 OS=Gibb... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-666 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417736 ID=CF417736; Name=CF417736; organism=Citrus sinensis; type=EST; length=716bp
CTGAGTTTCTGGTAGTGTTGTGGTCTTGAAAGCAACAATAAAGATGCTGG
CAAGTGACGACGGTCCGCCGGAGGTCACTTTAGAAACTTCCATGGGCTCT
TTCACCGTCGAGCTTTACTACAAGCACTCTCCAAGAACTTGCAGGAACTT
TGCTGAACTATCTCGCAGAGGTTATTATAATAACAGCAAATTCCACAGAA
TTATTAAGGATTTTATAGTTCAAGGTGGAGATCCTACCGGGACTGGAAGG
GGAGGAGATTCCATATATGGCCATGTTTTCGAAGATGAAATAAAACCAGA
ATTAAAGCATACTGGAGCTGGGATCTTGTCCATGGCAAATGCTGGTCCAA
ATACAAATGGAAGCCAGTTCTTTATCACTTTGGCGCCTGCTTCACATCTG
GATGGAAAGCACACTATATTTGGAAGAGTATGCAGAGGAATGGAAGTGAT
CAAAAGGCTTGGCAGTGTCCAAACTGATAAAGATGACAGGCCCATCCATG
ACGTTAAGATACTACGGACTTCTGTTAAGGACTGATGCCATGAAACGGTT
ATGGAAACCAACGTTTCCACATGATTTTGGGTGCACTAGAGCCAGTGTTC
AAAAATCTGATTCTGAAAATTTCTAACATCTGATTTTGGATGCACTGTAC
TTTGGTATTTTATTGAAACAGAAGGCAAATATGGATCATTTGGTAATTCT
CGTCTTATTTACCATT
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