CF417739

Overview
NameCF417739
Unique NameCF417739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1295 contig Csv1_Contig1295:46..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 5.744e-73
Identity = 138/208 (66.35%), Postives = 165/208 (79.33%), Query Frame = 3
Query:   66 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLNAT 689
            S S AQL+  FY+TTCPN S I+  V+Q A  +D RI  SLIRLHFHDCFV+GCDGS+LLDN  N T+I SEK ++ N NS RGF+VVD +K A+E+ACPG+VSC DILA+ASE SV+L+GGPSW V LGRRD RTAN+  A+ +LP+PF+ L  L  +FTNVGLN N DLVALSGAHTFGRAQC+ FS RLFNF+ TG+PDPTLN T
Sbjct:   19 SHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDN--NGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVN-DLVALSGAHTFGRAQCRTFSPRLFNFSNTGNPDPTLNTT 223          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.116e-71
Identity = 135/207 (65.22%), Postives = 162/207 (78.26%), Query Frame = 3
Query:   69 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLNAT 689
            +S AQL   FY+ TCPNAS I+   +Q A  SD RI  SLIRLHFHDCFVNGCDGS+LLD+ +   SI SEK + AN NS RGF VVD++K ALE+ACPGIVSC+DILA+ASE SV+L+GGPSWTV LGRRDG TAN S A+ +LP+PF+ L+ +  +F  VGL   TD+V+LSGAHTFGR QC  F+ RLFNFNGTG+PDPTLN+T
Sbjct:   28 TSSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTS---SIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLK-TTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNST 230          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 264.618 bits (675), Expect = 3.485e-70
Identity = 132/208 (63.46%), Postives = 153/208 (73.56%), Query Frame = 3
Query:   66 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLNAT 689
            S S AQLTP FY+ +CPN SNI+   + N   SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF V+D MKAA+ESACP  VSCAD+L IA++QSV L+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F NVGLN ++DLVALSG HTFG+ QC+F   RL+NF+ TG PDPTLN T
Sbjct:   26 SLSDAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTT 230          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.729e-69
Identity = 131/208 (62.98%), Postives = 154/208 (74.04%), Query Frame = 3
Query:   66 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLNAT 689
            S S AQLTP FY+T+CPN SNI+  ++ N   SD RITAS++RLHFHDCFVNGCD SILLDN    TS  +EK ++ N NSARGF  VD +KAA+E ACP  VSCAD+L IA++QSVNL+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F  VGL+  +DLVALSG HTFG+ QC+F   RL+NF+ TG PDPTLN T
Sbjct:   24 SLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNT---TSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTT 228          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.950e-69
Identity = 131/208 (62.98%), Postives = 152/208 (73.08%), Query Frame = 3
Query:   66 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLNAT 689
            S S AQLTP FY+ +CPN SNI+  ++ N   SD  I AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF VVD +KAA+E ACP  VSCAD+L IA++QSVNL+GGPSW VPLGRRD R A   LA+ NLP P  TL  LK  F NVGLN  +DLVALSG HTFG+ QC+F   RL+NF+ TG PDPTLN T
Sbjct:    5 SFSNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTT 209          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.032e-69
Identity = 132/207 (63.77%), Postives = 161/207 (77.78%), Query Frame = 3
Query:   69 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLNAT 689
            +S AQL   FY+ TCPNAS I+   +Q A  SD RI ASLIRLHFHDCFVNGCD SILLD+     SI SEK +  N NSARGF VVD +K ALE+ACPG+VSC+D+LA+ASE SV+L+GGPSWTV LGRRD  TAN + A+ ++P+P ++L  +  +F+ VGLN N DLVALSGAHTFGRA+C  F+ RLFNF+GTG+PDPTLN+T
Sbjct:   27 TSSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTG---SIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTN-DLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNST 229          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.464e-68
Identity = 129/208 (62.02%), Postives = 152/208 (73.08%), Query Frame = 3
Query:   66 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLNAT 689
            S S AQLTP FY+T+CP  +NI+   + N   SD RI  S++RLHFHDCFVNGCD SILLDN    TS  +EK ++ N NSARGF V+D MKAA+E ACP  VSCAD+L IA++QSV L+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F NVGL+  +DLVALSGAHTFG+ QC+F   RL+NF+ TG PDPTLN T
Sbjct:   27 SFSDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNT---TSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTT 231          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.497e-68
Identity = 130/208 (62.50%), Postives = 151/208 (72.60%), Query Frame = 3
Query:   66 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLNAT 689
            S S AQLTP FY+ +CPN +NI+   + N   SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF V+D MKAA+E ACP  VSCAD+L IA++QSV L+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F NVGL+  +DLVALSG HTFG+ QCQF   RL+NF+ TG PDPTLN T
Sbjct:   26 SLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTT 230          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 258.455 bits (659), Expect = 2.497e-68
Identity = 130/208 (62.50%), Postives = 152/208 (73.08%), Query Frame = 3
Query:   66 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLNAT 689
            S S AQLTP FY+ TCP+   I+   + N   SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF V+D MKAA+E+ACP  VSCADIL IA++Q+VNL+GGPSW VPLGRRD   A  +LA+ NLP PF TL  LK  F NVGL+  +DLVALSG HTFG+ QCQF   RL+NF+ TG PDPTLN T
Sbjct:   25 SISSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTT 229          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.151e-67
Identity = 130/203 (64.04%), Postives = 155/203 (76.35%), Query Frame = 3
Query:   81 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLNAT 689
            QL   FY+ TCPNAS I+   +Q AF SD RI ASLIRLHFHDCFV+GCD SILLD+     SI SEK +  N NSARGF VVD +K ALE+ CPG+VSC+DILA+ASE SV+L+GGPSWTV LGRRD  TAN + A+  +P+PF+ L  +  +F+ VGLN N DLVALSGAHTFGRA+C  F+ RLFNF+GT  PDPTLN+T
Sbjct:    1 QLNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSG---SIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTN-DLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNST 199          
The following BLAST results are available for this feature:
BLAST of CF417739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER15_IPOBA5.744e-7366.35Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER54_ARATH4.116e-7165.22Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER1A_ARMRU3.485e-7063.46Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER1B_ARMRU1.729e-6962.98Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER1C_ARMRU2.950e-6962.98Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER53_ARATH5.032e-6963.77Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER33_ARATH1.464e-6862.02Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER34_ARATH2.497e-6862.50Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER32_ARATH2.497e-6862.50Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PERA2_ARMRU6.151e-6764.04Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-669 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417739 ID=CF417739; Name=CF417739; organism=Citrus sinensis; type=EST; length=691bp
GGAAAATGTCTCCTCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCG
TTTGTGCTTGACGAATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTA
CAACACCACATGCCCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGA
ATGCTTTCAATTCCGATATCCGAATCACTGCCAGCCTCATCAGGCTTCAT
TTTCATGACTGCTTTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAA
CGTTGCCAATGATACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATA
ATAATTCAGCAAGAGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTT
GAGAGTGCCTGTCCTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGC
TTCTGAACAATCCGTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCAC
TGGGAAGAAGAGACGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAAT
CTTCCAACACCATTTCAGACTCTTGATTTGCTCAAAGGCAGATTTACAAA
TGTCGGTCTCAACGACAATACTGATCTGGTTGCACTCTCCGGCGCTCACA
CTTTTGGAAGGGCACAGTGTCAATTTTTCAGCCAAAGATTATTCAATTTC
AATGGAACTGGCCATCCAGACCCAACGCTGAACGCAACTCT
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