CF417749
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417749 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.030e-41 Identity = 94/167 (56.29%), Postives = 113/167 (67.66%), Query Frame = 3 Query: 114 RSGANQLSSVK--YLPSLRRNVNLSVRCTAXXXXXXXXXXXX-PTIPKAE---PQPP--KKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWXWEVCYAGPCCFGF 590 RS NQ +++ Y+P+LRRNV+L VR A PT P A PQP + P+MST FS++ AFSGPAPERINGRLAMIGFVAA+GVEI+KGQ + QLS GGVAWFLGTSVLL++ASL+P F+GVSVESKS M+SDAE W + G F Sbjct: 20 RSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAF 186
BLAST of CF417749 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.437e-27 Identity = 57/107 (53.27%), Postives = 74/107 (69.16%), Query Frame = 3 Query: 234 PTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLS--DGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELW 548 PT A P+P K + + + AFSGPAPERINGRLAM+GFVAAL VE ++G + Q+ G+AWFL T+ + +VASL+PL +G SVESKS G ++DAELW Sbjct: 100 PTTIPAAPKPVTK-KANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELW 205 HSP 2 Score: 34.6538 bits (78), Expect = 7.437e-27 Identity = 16/19 (84.21%), Postives = 17/19 (89.47%), Query Frame = 1 Query: 553 GRFAMLGLVALAFTEFVKG 609 GRFAMLGLVALA TEF+ G Sbjct: 207 GRFAMLGLVALAATEFITG 225
BLAST of CF417749 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.655e-26 Identity = 70/165 (42.42%), Postives = 93/165 (56.36%), Query Frame = 3 Query: 57 LATQSMLASPVAARVTGIRRSGANQLSSVKYLPSLRRNVNLSVRCTAXXXXXXXXXXXXPTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELW 548 +AT ++S A V + RS A+ + + LP+L R L VR P+ P PP KP+ ST + AFSGPAPERINGRLAM+GFV AL VE +G + +QL G G AWF T +L++ASLVPL +G S E ++ M ++AELW Sbjct: 1 MATMMSMSSFAGAAV--VPRSSASSFGA-RSLPALGRRA-LVVRAQTEG----------PSAP-----PPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELW 146 HSP 2 Score: 32.3426 bits (72), Expect = 1.655e-26 Identity = 15/19 (78.95%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 553 GRFAMLGLVALAFTEFVKG 609 GRFAMLGLVALA TE + G Sbjct: 148 GRFAMLGLVALAATEIITG 166
BLAST of CF417749 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.158e-26 Identity = 53/97 (54.64%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 261 PPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELW 548 PP KP+ ST + AFSGPAPERINGRLAM+GFV AL VE +G + +QL G G AWF T +L++ASLVPL +G S E ++ M ++AELW Sbjct: 45 PPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELW 141 HSP 2 Score: 31.5722 bits (70), Expect = 2.158e-26 Identity = 14/19 (73.68%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 553 GRFAMLGLVALAFTEFVKG 609 GRFAM+GLVALA TE + G Sbjct: 143 GRFAMIGLVALAATEIITG 161
BLAST of CF417749 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.594e-25 Identity = 73/188 (38.83%), Postives = 105/188 (55.85%), Query Frame = 3 Query: 45 MAASLATQSMLASPVAARVTGIRRSGANQLSSVKY---LPSLRRNVNLSVRCTAXXXXXXXXXXXXP--TIPKAEPQPPKKPRMSTGFS-EVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWXWEVCYAGPCCFGF 590 MA+S ++ A + T I R G N L K LP +RRN +VR T P + ++T + ++F+F G APERINGR AMIGFVAA+GVE++ G+DVF+Q+ +GGV WFL TS +L +A+L+P+++G+S E+K++GF SDAE+W G F Sbjct: 1 MASSTCYATIPAMSCRGQST-ITRFGPNNLFLGKQSYELPLMRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAF 187
BLAST of CF417749 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.891e-13 Identity = 51/107 (47.66%), Postives = 59/107 (55.14%), Query Frame = 3 Query: 237 TIPKAEPQPPKKPRMSTG--FSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSD--GFMTSDAEL 545 T P + P PP P +EV FSG APE INGRLAM+GFVAALG E+S G+ V QL D L T VL + ASL+P F K D G T DAE+ Sbjct: 47 TPPPSSPSPPPPPPTPAAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAF----ARRKGDAMGPFTPDAEM 147 HSP 2 Score: 23.0978 bits (48), Expect = 2.891e-13 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 1 Query: 553 GRFAMLGLVALAFTEFVKG 609 GRFAM+G A+ E ++G Sbjct: 150 GRFAMIGFAAMLVYEGIQG 168 The following BLAST results are available for this feature:
BLAST of CF417749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417749 ID=CF417749; Name=CF417749; organism=Citrus sinensis; type=EST; length=615bpback to top |