CF417753
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417753 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2) HSP 1 Score: 314.309 bits (804), Expect = 3.769e-85 Identity = 154/226 (68.14%), Postives = 188/226 (83.19%), Query Frame = 3 Query: 6 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSMLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKV 683 VK K GDEVY +++EKAL+ PK+ GSLAEYTAVEE LLALKPKN+ F +AA LPLA ETA EGL R+ FSAGKSILVL GAGGVG++VIQLAKHV+G L+L+RSLGADLAIDYTKENIEDLP+K+DVVFDA+G CDKA+K +KEGG+VV++ G+VTPP FV+TS+G +L+KLNPY+ESGKVK ++DPKGPFPFS+ +AFS+LE++ ATGKV Sbjct: 155 VKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADEGLVRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKVAATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGKVVALTGAVTPPGFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKGPFPFSRVADAFSYLETNHATGKV 380
BLAST of CF417753 vs. ExPASy Swiss-Prot
Match: RT4I1_DANRE (Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.613e-19 Identity = 85/267 (31.84%), Postives = 127/267 (47.57%), Query Frame = 3 Query: 6 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-----FSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDL---PEKFDVVFDAV-GQCDK-ALKAVK--EGGRVVSII----------GSVTPPASSFV--------------------LTSDGSMLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGK 680 VK FK GD+V+ I P + GSLAE+ V N ++ KPK+L EAAS+P TA+ + + SA K +L+LGG+GGVGT IQ+ K +G L+R LGAD +DYT +E EKFD++ D++ G+ +K AL +K G + V++I G S V GS L++++ +++GKV+ +++ F F+Q EAF +E A GK Sbjct: 120 VKYFKPGDQVWAAIP------PWKQGSLAEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAKKRVLILGGSGGVGTFAIQMVK-AWGAHVTVTCSQNAE-RLVRDLGADDVVDYTAGPVEKQLKNLEKFDLILDSIGGETEKWALDLLKPWSGAKFVTLITPFLQNTDRLGLADGMMQSAVTVGCKVVKNLRKGVHYRWGFFAPSGSALDEVSEMVDAGKVRPVVEE--VFSFAQVPEAFQKVEQGHARGK 376
BLAST of CF417753 vs. ExPASy Swiss-Prot
Match: RT4I1_BOVIN (Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17 Identity = 79/271 (29.15%), Postives = 123/271 (45.39%), Query Frame = 3 Query: 6 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAGGVGTMVIQLAK----HVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIE---DLPEKFDVVFDAVGQCDK--ALKAVKE--GGRVVSII------------------GSVTPPASSF------------VLTSDGSMLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGK 680 V+ FK GDEV+ + P + G+L+E+ V N ++ KP++L+ +AASLP TA+ + + GK +L+LG +GGVGT IQ+ K HV +L+R LGAD IDY N+E + FD + D VG + ALK +K+ G V+++ VT + + + G L+ + +E+GK++ +I+ FPFS+ EAF +E A GK Sbjct: 134 VRYFKPGDEVWAAVP------PWKQGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDAS------ELVRKLGADDVIDYKSGNVEAQLKSSKPFDFILDNVGGSTETWALKFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKTLKHFWQGVHYRWAFFMASGPCLDDIAELVEAGKIQPVIEK--TFPFSKVPEAFLKVERGHARGK 390
BLAST of CF417753 vs. ExPASy Swiss-Prot
Match: RT4I1_MOUSE (Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 9.786e-17 Identity = 82/278 (29.50%), Postives = 125/278 (44.96%), Query Frame = 3 Query: 6 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAGGVGTMVIQLAK----HVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK---FDVVFDAVGQCDK--ALKAVKE--GGRVVSIIGSVTPPASSFVLTSD-------------------------------------GSMLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGK 680 VK F+ GDEV+ + P + G+L+E+ V N ++ KPK+L+ +AASLP TA+ + + GK L+LG +GGVGT IQ+ K HV +L+R LGAD IDYT ++E+ + FD + D VG + AL +K+ G V++ VTP F+L D G L+++ +++GK++ +I+ FPFS+ EAF +E A GK Sbjct: 134 VKYFQPGDEVWAAVP------PWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASGGVGTFAIQVMKAWGAHVTAVCSKDAS------ELVRKLGADEVIDYTLGSVEEQLKSLKLFDFILDNVGGSTETWALNFLKKWSGATYVTL---VTP----FLLNMDRLGVADGMLQTGVTVGTKALKHLWQGVHYRWAFFMASGPYLDEIAELVDAGKIRPVIE--RTFPFSEVPEAFLKVERGHARGK 390
BLAST of CF417753 vs. ExPASy Swiss-Prot
Match: RT4I1_HUMAN (Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.857e-16 Identity = 77/271 (28.41%), Postives = 122/271 (45.02%), Query Frame = 3 Query: 6 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAGGVGTMVIQLAK----HVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK---FDVVFDAVGQCDK--ALKAVKE--GGRVVSII------------------GSVTPPASSF------------VLTSDGSMLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGK 680 VK FK GDEV+ + P + G+L+E+ V N ++ KPK+L+ +AASLP TA+ + + GK +L+LG +GGVGT IQ+ K HV +L+R LGAD IDY ++E+ + FD + D VG + A +K+ G V+++ VT + + + G L+ + +++GK++ +I+ FPFS+ EAF +E A GK Sbjct: 134 VKYFKPGDEVWAAVP------PWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDAS------ELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQ--TFPFSKVPEAFLKVERGHARGK 390
BLAST of CF417753 vs. ExPASy Swiss-Prot
Match: QORH_ARATH (Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14 Identity = 70/252 (27.78%), Postives = 105/252 (41.67%), Query Frame = 3 Query: 6 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE------GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKAL------KAVKEGGRVVSI-----------IGSVTPPASSFV---LTSDGSMLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKV 683 VK FK GD+V ++ G LAE+ E L +P+ + EAA+LP+A TA + GL+ +ILV +GGVG +QLAK ++ ++SLGAD +DY L +DAV C + + E G+V+ I + +T V L LE + ++ GKVK +ID K P S+ +A++ ATGK+ Sbjct: 84 VKNFKAGDKVVAVLSHLG------GGGLAEFAVATEKLTVKRPQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAK--LANAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEPNLSENGKVIDITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKTVIDSK--HPLSKAEDAWAKSIDGHATGKI 325
BLAST of CF417753 vs. ExPASy Swiss-Prot
Match: QORH_SPIOL (Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.323e-13 Identity = 71/252 (28.17%), Postives = 110/252 (43.65%), Query Frame = 3 Query: 6 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA------FSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLP----EKFD-VVFDAVGQCDKALKA-VKEGGRVVSIIGSVTPPAS--------------SFVLTSDGSMLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKV 683 V +FK GD+V ++ G+LAEY +ENL +P +S E A+LP+A TA++ L + A K+IL+ +GGVG +QLAK G LD ++ LGAD +DY L +K+D VV A G + + E G+V+ + T + +L E + ++ K+K +ID K P S+ +A+S + ATGK+ Sbjct: 84 VNRFKTGDKVVAVLSHAT------GGALAEYAVAKENLTVARPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAK--LGNTHVTATCGARNLDFVKGLGADEVLDYKTPEGASLTSPSGKKYDYVVHGASGIPWSTFEPNLSEAGKVIDLTPGPTAMMTFAWKKLTFSKKQLVPLLLIPKIPNFEYVVNLVKEKKLKTVIDSK--HPLSKGEDAWSRIMGGHATGKI 325
BLAST of CF417753 vs. ExPASy Swiss-Prot
Match: ZDH1_STAES (Zinc-type alcohol dehydrogenase-like protein SE_1777 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1777 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13 Identity = 57/180 (31.67%), Postives = 88/180 (48.89%), Query Frame = 3 Query: 3 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-------ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKE--------NIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSII 497 QV F+ GD V+ P +NGS EY +EE L+A P NL +AASLPL TAYE L + + + GKS+L++ GAGGVG++ Q+AK +G + ++GAD+ +++ K+ +IE + F FD + + VK G + +I+ Sbjct: 75 QVSMFQEGDVVFYS------GSPNQNGSNEEYQLIEEYLVAKAPTNLKSEQAASLPLTGLTAYETLFDVFGISKEPSENKGKSLLIINGAGGVGSIATQIAK-FYGLKVITTASREDTIKWSVNMGADVVLNHKKDLSQQFKDNHIEGVDYIF-CTFDTDMYYEMMVNLVKPRGHIATIV 246
BLAST of CF417753 vs. ExPASy Swiss-Prot
Match: ZDH1_STAEQ (Zinc-type alcohol dehydrogenase-like protein SERP1785 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1785 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13 Identity = 57/180 (31.67%), Postives = 88/180 (48.89%), Query Frame = 3 Query: 3 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-------ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKE--------NIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSII 497 QV F+ GD V+ P +NGS EY +EE L+A P NL +AASLPL TAYE L + + + GKS+L++ GAGGVG++ Q+AK +G + ++GAD+ +++ K+ +IE + F FD + + VK G + +I+ Sbjct: 75 QVSMFQEGDVVFYS------GSPNQNGSNEEYQLIEEYLVAKAPTNLKSEQAASLPLTGLTAYETLFDVFGISKEPSENKGKSLLIINGAGGVGSIATQIAK-FYGLKVITTASREDTIKWSVNMGADVVLNHKKDLSQQFKDNHIEGVDYIF-CTFDTDMYYEMMVNLVKPRGHIATIV 246
BLAST of CF417753 vs. ExPASy Swiss-Prot
Match: QORL2_NEMVE (Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.462e-12 Identity = 69/261 (26.44%), Postives = 115/261 (44.06%), Query Frame = 3 Query: 3 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVG-----QCDKALKAVKEGGRVVSI---IGSVTPPASSFVLTSDGS-------------------MLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKV 683 +V GD V G + G +AE + + L P +LSF +AA+L ++ TAY GL+ A G+++LV AG +G + LA +VFG L +++ +GA IDYT+ENI+D ++ +V+ +AVG QC LK + G ++ + G + ++ +L + S ++K Y ++GK+K F + EAF + ++TGKV Sbjct: 112 KVTSLSKGDRVLGVCGQ--------GGGMAEECVLPQTALWKIPSSLSFTQAAALAISYGTAYIGLKHKANLQPGQTVLVTAAAGALGLASVDLAANVFG-AKVIGASRKEKLVIVQEIGATATIDYTRENIKDKVKELTDGHGANVIMEAVGGDVFKQC---LKCIAWNGYIIPVGFASGEIPQIPANILLVKNCSAVGLYWGAHSKHDPQLLRESVDKTLEYFKNGKLKGPY-ISASFGLDKVNEAFQMILQRKSTGKV 359 The following BLAST results are available for this feature:
BLAST of CF417753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417753 ID=CF417753; Name=CF417753; organism=Citrus sinensis; type=EST; length=685bpback to top |