CF418022

Overview
NameCF418022
Unique NameCF418022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:534..1216. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 316.235 bits (809), Expect = 9.918e-86
Identity = 148/171 (86.55%), Postives = 161/171 (94.15%), Query Frame = 2
Query:    2 EILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLH 514
            ++LE YLPDHN+S+SVVLE+F +IGID PGLVALLGSHSVGRTHCVKLVHRLYPEVDP+LNPDHVPHMLHKCPD+IPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGL++VDHQLA DKRTRP VKKMAK Q YFFKEF+RAI +LSENNPLTG+KGEIRK CNLANK H
Sbjct:  160 DMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLANKNH 330          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.804e-53
Identity = 95/166 (57.23%), Postives = 122/166 (73.49%), Query Frame = 2
Query:    8 LEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            +E  +P+HNDS+S V+  F +IGID    VALLG+HSVGR HCV LVHRLYP +DP L+P +  ++  +CP   PDP AV Y RNDR TPMV+DN YY+NI+ +KGL+++D +LATD RT P+V KMA   +YF ++FSR + LLSE NPLTG +GEIRK C   N
Sbjct:  162 VETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.036e-22
Identity = 57/167 (34.13%), Postives = 93/167 (55.69%), Query Frame = 2
Query:    5 ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            ++   LP  +  +S ++++F++ G     +VAL G+H++G +HC +  +R+ P      NP     +   C ++  DP    +  ND  TP   DN Y++NI    GL+  DH L +D RTRP+V+  A+ Q  FF +F+ A+  LS +  LTG +GEIR+ C+  N
Sbjct:  164 LVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKKACSNSKNDPTISVF--NDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.940e-21
Identity = 59/162 (36.42%), Postives = 82/162 (50.62%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            LP    + S ++  FA   ++   LVAL G H++G  HC     RLYP  DP +N      +   CP A      V    ND  +P V DN YY ++++ +GL   D  L  DKRTR  V+  A  Q  FF  F+ A+  + + + LTGT+GEIR  C+  N
Sbjct:  182 LPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYPNQDPTMNQFFANSLKRTCPTANSSNTQV----NDIRSPDVFDNKYYVDLMNRQGLFTSDQDLFVDKRTRGIVESFAIDQQLFFDYFTVAMIKMGQMSVLTGTQGEIRSNCSARN 339          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.553e-21
Identity = 60/167 (35.93%), Postives = 91/167 (54.49%), Query Frame = 2
Query:    5 ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            +L   LP  +  +S ++++F + G     +VAL G+HS+G +HC + V R+    +   NP     +   C +   DP    +  ND  TP   DN YY+N+    GL+  DH L +D RTR +V   AK+QD FFK+F++A+  LS     TG +GEIR+ C+  N
Sbjct:  153 LLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGRVGRN-NTGYNPRFAVALKKACANYPKDPTISVF--NDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20
Identity = 58/172 (33.72%), Postives = 89/172 (51.74%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK-RTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHD 517
            +P    ++  +L  F   G+D   LVALLGSH++G + C+    RLY        D  LN D+   +   CP +  D         D  TP   DN YY+N+++ +GL+  D  L T    T   VK  A+++  FF++F++++  +   +PLTGT GEIR++C   N  HD
Sbjct:  177 IPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNL---DYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRICRRVN--HD 343          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.544e-20
Identity = 56/167 (33.53%), Postives = 85/167 (50.90%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            LP   D ++ +   FA  G+    ++AL G+H++G  HC K+ +R+Y      +VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+   KGL   D  L TD+R++P V   A +   F + F  ++  L      TG+ G IR+ C   N
Sbjct:  166 LPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNI-DPRVA--INMDPTTPRQFDNVYYKNLQQGKGLFTSDQVLFTDRRSKPTVDLWANNGQLFNQAFINSMIKLGRVGVKTGSNGNIRRDCGAFN 329          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.544e-20
Identity = 53/168 (31.55%), Postives = 94/168 (55.95%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            +P  N++ + ++ RF   G+D   +VAL GSH++G + C     RLY +      D  L   +  ++  +CP +  D    +   N  G     DN+Y++N+++N GL+  D  L ++++++R  VKK A+ Q+ FF++F+ ++  +   +PLTG+ GEIRK C   N
Sbjct:  172 IPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINSAGR---FDNSYFKNLIENMGLLNSDEVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 336          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.235e-19
Identity = 53/168 (31.55%), Postives = 93/168 (55.36%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            +P  N++   +L +F   G+D   LV+L GSH++G + C     RLY +      D  L+  +   +  +CP +  D         D  TP   DN+Y++N++  KGL+  D  L T +K+++  V+  A++Q+ FF++F++++  +   +PLTG KGEIR++C   N
Sbjct:  169 IPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFL---DFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRRVN 333          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.107e-19
Identity = 54/170 (31.76%), Postives = 89/170 (52.35%), Query Frame = 2
Query:    8 LEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDP----ALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            +E  L   N +M  ++  F + G+    +VAL+G+H++G +HC +   R++ + D      +NP +   +   C +   D +   +  ND  TP   DN YY+N+    GL+  DH +A D RTR  V   A+ +  FF  F++A+  +SE N  TG  GE+R+ C+  N
Sbjct:  155 VEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNKSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAF--NDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEVRRRCDQYN 322          
The following BLAST results are available for this feature:
BLAST of CF418022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PER42_ARATH9.918e-8686.55Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH3.804e-5357.23Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER63_ARATH2.036e-2234.13Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER12_ARATH2.940e-2136.42Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER31_ARATH8.553e-2135.93Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER36_ARATH1.905e-2033.72Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER50_ARATH5.544e-2033.53Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER15_ARATH5.544e-2031.55Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER72_ARATH1.235e-1931.55Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER6_ARATH2.107e-1931.76Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-952 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF418022 ID=CF418022; Name=CF418022; organism=Citrus sinensis; type=EST; length=683bp
AGAGATACTTGAGCAGTATCTCCCAGATCACAATGACAGCATGTCTGTTG
TTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCT
CTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCA
CCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGC
ATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAG
TATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTA
TAGGAACATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAG
CCACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCAAGAGTCAA
GACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTTTCTGAGAA
CAACCCTCTCACAGGTACAAAGGGTGAGATCCGAAAGGTTTGCAATCTTG
CCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACAGCTGTATTAGCTAC
AACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTTCTTCTATGAGGAAG
AAAAGAGTGTGAGATGAGCTCCCAATAAGATGGTTTTTCTAGATCGGTTT
GTTTCCTGTGAGATGTTCGTATTACTGCTATTA
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