CF418023
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF418023 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.377e-29 Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 1 Query: 1 SGVGVGSIGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 228 +GVGV SIGK LVNSKE PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYLSEAALG+AN DA+ +G FYG Sbjct: 362 TGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
BLAST of CF418023 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 3.795e-27 Identity = 57/75 (76.00%), Postives = 69/75 (92.00%), Query Frame = 1 Query: 1 SGVGVGSIGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFY 225 SGVGV + GK LVNSKE PTF+QP+M+++KLL+YGNM+VQEQENVKRVQLADKYL+EAALG ANEDAI+SG+F+ Sbjct: 364 SGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
BLAST of CF418023 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.195e-26 Identity = 56/75 (74.67%), Postives = 68/75 (90.67%), Query Frame = 1 Query: 1 SGVGVGSIGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFY 225 SGVGV S+GK LVNSKE PTF+QP+MT++KLL Y +M+VQEQENVKRVQLAD+YL+EAALG ANEDAI+SG+F+ Sbjct: 366 SGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440
BLAST of CF418023 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.195e-26 Identity = 56/74 (75.68%), Postives = 67/74 (90.54%), Query Frame = 1 Query: 1 SGVGVGSIGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNF 222 S VGV +IGK LVNSKE PTFEQP+MT++KLL+YGNM+V+EQENVKRVQLADKY+SEAALG+AN+DAI+ G F Sbjct: 362 SEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435
BLAST of CF418023 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.195e-26 Identity = 57/76 (75.00%), Postives = 66/76 (86.84%), Query Frame = 1 Query: 1 SGVGVGSIGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 228 S VGV +IGK LVNSKE P+FEQP+MT++KLL YG M+VQEQENVKRVQLADKY+SEAALG+AN DAI+ G FYG Sbjct: 362 SEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437
BLAST of CF418023 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.346e-26 Identity = 54/74 (72.97%), Postives = 68/74 (91.89%), Query Frame = 1 Query: 7 VGVGSIGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 228 +GV +I K LVNS+E PTF+QP+MT+EKL+EYG+M+VQEQENVKRVQLADKYLSEAALG+AN+DA+++G FYG Sbjct: 351 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424
BLAST of CF418023 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 4.639e-25 Identity = 52/76 (68.42%), Postives = 65/76 (85.53%), Query Frame = 1 Query: 1 SGVGVGSIGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 228 + VGV ++GK LVNSK+ P FEQP MT++KL+EYGNM+VQEQENVKRVQLAD+Y+S AALG+AN+DAI G F+G Sbjct: 360 NSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435 HSP 2 Score: 67.0106 bits (162), Expect = 8.493e-11 Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 2 Query: 365 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYTL 478 GKAAQQ+++PV +GCTDP A+N+DPTARSDDGSC Y L Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
BLAST of CF418023 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.058e-25 Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 1 SGVGVGSIGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFY 225 SG G+ IG L+NS + PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYL EAALG+AN DAI +G+F+ Sbjct: 366 SGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440
BLAST of CF418023 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.033e-24 Identity = 54/75 (72.00%), Postives = 67/75 (89.33%), Query Frame = 1 Query: 1 SGVGVGSIGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFY 225 S GV +I + LVNSKE PTFEQP++T+EKLLEYG+M+V EQENVKRVQLADKYL+EAALGEANEDA+++G+F+ Sbjct: 358 SETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432
BLAST of CF418023 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 1.763e-24 Identity = 53/76 (69.74%), Postives = 67/76 (88.16%), Query Frame = 1 Query: 1 SGVGVGSIGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 228 S GV +IGK LVNS+E P FEQP+MT+EKL+EYG M+V+EQENVKRVQLA++YLSEAALG+AN DA+++G+FYG Sbjct: 353 SDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 428 The following BLAST results are available for this feature:
BLAST of CF418023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF418023 ID=CF418023; Name=CF418023; organism=Citrus sinensis; type=EST; length=613bpback to top |