CF503832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503832 vs. ExPASy Swiss-Prot
Match: AB15B_ARATH (ABC transporter B family member 15 OS=Arabidopsis thaliana GN=ABCB15 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.904e-17 Identity = 37/40 (92.50%), Postives = 40/40 (100.00%), Query Frame = 1 Query: 1 KILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVA 120 K+LTFEVGWFD+DENSSGAICSRLAKDANVVRSLVGDR+A Sbjct: 755 KVLTFEVGWFDRDENSSGAICSRLAKDANVVRSLVGDRMA 794 HSP 2 Score: 28.4906 bits (62), Expect = 1.904e-17 Identity = 12/19 (63.16%), Postives = 17/19 (89.47%), Query Frame = 2 Query: 116 LPLLVQTLSSITIAFTMSL 172 + L+VQT+S++TIAFTM L Sbjct: 793 MALVVQTVSAVTIAFTMGL 811
BLAST of CF503832 vs. ExPASy Swiss-Prot
Match: MDR_ORYSJ (Putative multidrug resistance protein OS=Oryza sativa subsp. japonica GN=Os02g0190300 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.451e-14 Identity = 36/40 (90.00%), Postives = 40/40 (100.00%), Query Frame = 1 Query: 1 KILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVA 120 KILTFE+GWFD+DENSSGAICS+LAKDANVVRSLVGDR+A Sbjct: 757 KILTFEIGWFDRDENSSGAICSQLAKDANVVRSLVGDRMA 796
BLAST of CF503832 vs. ExPASy Swiss-Prot
Match: AB22B_ARATH (ABC transporter B family member 22 OS=Arabidopsis thaliana GN=ABCB22 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.730e-14 Identity = 34/40 (85.00%), Postives = 39/40 (97.50%), Query Frame = 1 Query: 1 KILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVA 120 K+LTFEV WFD+DENSSG+ICSRLAKDANVVRSLVG+RV+ Sbjct: 777 KLLTFEVSWFDEDENSSGSICSRLAKDANVVRSLVGERVS 816 HSP 2 Score: 23.483 bits (49), Expect = 1.730e-14 Identity = 9/17 (52.94%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 122 LLVQTLSSITIAFTMSL 172 LLVQT+S++++A T+ L Sbjct: 817 LLVQTISAVSVACTLGL 833
BLAST of CF503832 vs. ExPASy Swiss-Prot
Match: AB16B_ARATH (ABC transporter B family member 16 OS=Arabidopsis thaliana GN=ABCB16 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.929e-14 Identity = 34/40 (85.00%), Postives = 39/40 (97.50%), Query Frame = 1 Query: 1 KILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVA 120 KILTFEV WFD++ENSSGAICSRLAKDANVVRSLVG+R++ Sbjct: 741 KILTFEVNWFDEEENSSGAICSRLAKDANVVRSLVGERMS 780 HSP 2 Score: 22.7126 bits (47), Expect = 4.929e-14 Identity = 9/19 (47.37%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 116 LPLLVQTLSSITIAFTMSL 172 + LLVQT+S++ +A T+ L Sbjct: 779 MSLLVQTISTVMVACTIGL 797
BLAST of CF503832 vs. ExPASy Swiss-Prot
Match: AB18B_ARATH (ABC transporter B family member 18 OS=Arabidopsis thaliana GN=ABCB18 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 8.317e-14 Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 1 Query: 1 KILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVA 120 KILTFEV WFD+DENSSGAICSRLAKDAN+VRSLVGDR++ Sbjct: 740 KILTFEVNWFDKDENSSGAICSRLAKDANMVRSLVGDRMS 779 HSP 2 Score: 20.4014 bits (41), Expect = 8.317e-14 Identity = 8/19 (42.11%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 116 LPLLVQTLSSITIAFTMSL 172 + LLVQT+S+++I + L Sbjct: 778 MSLLVQTISAVSITCAIGL 796
BLAST of CF503832 vs. ExPASy Swiss-Prot
Match: AB17B_ARATH (ABC transporter B family member 17 OS=Arabidopsis thaliana GN=ABCB17 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.073e-13 Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 1 Query: 1 KILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVA 120 KILTFEV WFD D+NSSGAICSRLAKDANVVRS+VGDR++ Sbjct: 755 KILTFEVNWFDIDDNSSGAICSRLAKDANVVRSMVGDRMS 794 HSP 2 Score: 20.7866 bits (42), Expect = 3.073e-13 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 116 LPLLVQTLSSITIAFTMSL 172 + LLVQT+S++ IA + L Sbjct: 793 MSLLVQTISAVIIACIIGL 811 The following BLAST results are available for this feature:
BLAST of CF503832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503832 ID=CF503832; Name=CF503832; organism=Citrus sinensis; type=EST; length=172bpback to top |