CF503836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503836 vs. ExPASy Swiss-Prot
Match: ERF3B_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus GN=Gspt2 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.463e-23 Identity = 52/92 (56.52%), Postives = 70/92 (76.09%), Query Frame = 1 Query: 70 PEPKVKH--KEVSAVEDAESQQETEGNNKR-HLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 336 PE VK +E V ++S G K+ H+NVVFIGHVDAGKST GGQI+FL+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER Sbjct: 176 PEESVKEVMEEKEEVRKSKSVSIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEER 267
BLAST of CF503836 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.462e-22 Identity = 44/63 (69.84%), Postives = 58/63 (92.06%), Query Frame = 1 Query: 148 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 336 K H+NVVFIGHVDAGKST GGQI+FL+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER Sbjct: 201 KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEER 263
BLAST of CF503836 vs. ExPASy Swiss-Prot
Match: ERF3B_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Homo sapiens GN=GSPT2 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 2.462e-22 Identity = 44/63 (69.84%), Postives = 58/63 (92.06%), Query Frame = 1 Query: 148 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 336 K H+NVVFIGHVDAGKST GGQI+FL+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER Sbjct: 201 KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEER 263
BLAST of CF503836 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.216e-22 Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 25 EEDSEEVQAVSQPVHPEPKVKHKEVSAVEDAESQQETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 336 EE ++E+ + + P+PK SAV + + K H+NVVFIGHVDAGKST GGQI++L+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER Sbjct: 44 EESTQEMMEEEEEI-PKPK------SAVAPPGAPK------KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEER 134
BLAST of CF503836 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.486e-22 Identity = 43/63 (68.25%), Postives = 58/63 (92.06%), Query Frame = 1 Query: 148 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 336 K H+NVVFIGHVDAGKST GGQI++L+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER Sbjct: 72 KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEER 134
BLAST of CF503836 vs. ExPASy Swiss-Prot
Match: ERF3_YEAST (Eukaryotic peptide chain release factor GTP-binding subunit OS=Saccharomyces cerevisiae GN=SUP35 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.556e-21 Identity = 52/121 (42.98%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 4 VEVVDKMEEDSE----EVQAVSQPVHPEPKVKHKEVSA-VEDAESQQETEGNN-----KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 336 V+ +K EE SE E +S+ H A +++ E + + E N K H++++F+GHVDAGKST GG +L+L+G VD RTI+KYE+EAKD R+ WY++++MDTN+EER Sbjct: 200 VQTEEKTEEKSELPKVEDLKISESTHNTNNANVTSADALIKEQEEEVDDEVVNDMFGGKDHVSLIFMGHVDAGKSTMGGNLLYLTGSVDKRTIEKYEREAKDAGRQGWYLSWVMDTNKEER 320
BLAST of CF503836 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 4.644e-21 Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 13 VDKMEEDSEEVQAVSQPVHPEPKVKHKEVSAVEDAESQQETEGNN----KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 336 V K + V + S PV V + A E + E + K H++++F+GHVDAGKST GG IL+L+G VD RT++KYE+EAKD R+ WY++++MDTN+EER Sbjct: 238 VKKESTPTPSVASKSAPVSASASVVTADALAKEQEDEVDEEVVKDMFGGKDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVEKYEREAKDAGRQGWYLSWVMDTNKEER 349
BLAST of CF503836 vs. ExPASy Swiss-Prot
Match: ERF3_PICPI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Pichia pinus GN=SUP2 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.065e-21 Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 1 Query: 34 SEEVQAVSQPVHPEPKVKHKEVSA------VEDAESQQETEGNN-----KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 336 S+EV A + + E KE + V++ E Q + N K H++++F+GHVDAGKST GG +LFL+G VD RT++KYE+EAKD R+ WY+++IMDTN+EER Sbjct: 267 SKEVAAAAAALKKEVSQAKKESNVTNADALVKEQEEQIDASIVNDMFGGKDHMSIIFMGHVDAGKSTMGGNLLFLTGAVDKRTVEKYEREAKDAGRQGWYLSWIMDTNKEER 378
BLAST of CF503836 vs. ExPASy Swiss-Prot
Match: ERF3_DICDI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Dictyostelium discoideum GN=erf3 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.351e-20 Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 7 EVVDKMEEDSEEVQAVSQPVHPEPKVKHKEVSAVEDAESQQETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 336 +V D ED +EV V++ + KV ++ ++ HLN+VF+GHVDAGKST G I+ L+GQVD T+ KYE+EAK+ RE W AYIMDTNEEER Sbjct: 84 KVEDDDIEDDDEVDEVAEKIEQVVKVLPED----------------SREHLNIVFLGHVDAGKSTLSGSIMVLTGQVDPHTLAKYEREAKENHREGWIYAYIMDTNEEER 177
BLAST of CF503836 vs. ExPASy Swiss-Prot
Match: ERF3_DEBHA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Debaryomyces hansenii GN=SUP35 PE=3 SV=4) HSP 1 Score: 97.8265 bits (242), Expect = 1.765e-20 Identity = 47/94 (50.00%), Postives = 68/94 (72.34%), Query Frame = 1 Query: 55 SQPVHPEPKVKHKEVSAVEDAESQQETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 336 S PV + KV ++V V++ + G K H++++F+GHVDAGKST GG IL+L+G VD RT+ KYE+EAKD R+ WY++++MDTN+EER Sbjct: 248 STPVTSD-KVIQEQVDEVDEEVVKDMFGG--KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVDKYEREAKDAGRQGWYLSWVMDTNKEER 338 The following BLAST results are available for this feature:
BLAST of CF503836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503836 ID=CF503836; Name=CF503836; organism=Citrus sinensis; type=EST; length=341bpback to top |