CF503844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503844 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 2.410e-33 Identity = 55/93 (59.14%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 21 TGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGT 299 +GKCGIA+E SY VCDNYY+CP+S TCCC++EYG C+AWGCCPLE ATCCDDHYSCCPH+YPICNV+ GT Sbjct: 331 SGKCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGT 423
BLAST of CF503844 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.545e-32 Identity = 56/99 (56.57%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 3 NVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGT 299 N+A + +GKCGIA+E SY CD+YY+CPESNTCCC+FEYG CFAWGCCPLEAATCCDD+YSCCPH+YP+C++ GT Sbjct: 334 NIASS-SGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGT 431
BLAST of CF503844 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.750e-27 Identity = 47/93 (50.54%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 21 TGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGT 299 +G CG+A+E SY CD Y C TCCC+ ++ SCF+WGCCPLE ATCC+DHYSCCPHDYPICNVR GT Sbjct: 220 SGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGT 312
BLAST of CF503844 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.180e-25 Identity = 49/99 (49.49%), Postives = 55/99 (55.56%), Query Frame = 3 Query: 21 TGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXA------VCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGT 299 TGKCGIAM ASY VCD+ +SCP +TCCC F + N C WGCCP+E ATCC DH SCCP DYP+CN RAGT Sbjct: 344 TGKCGIAMMASYPTKSGANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGT 442
BLAST of CF503844 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.241e-21 Identity = 43/93 (46.24%), Postives = 49/93 (52.69%), Query Frame = 3 Query: 21 TGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGT 299 TGKCGIAM ASY CD Y CP TCCC + N C WGCCP+E ATCC DH +CCP +YP+CN +A T Sbjct: 361 TGKCGIAMMASYPIKKGPNPKPSPPSPAPSPPQQ--CDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKART 451 The following BLAST results are available for this feature:
BLAST of CF503844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503844 ID=CF503844; Name=CF503844; organism=Citrus sinensis; type=EST; length=301bpback to top |