CF503845

Overview
NameCF503845
Unique NameCF503845
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length455
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig802 contig Csv1_Contig802:108..562. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503845 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.028e-37
Identity = 83/140 (59.29%), Postives = 98/140 (70.00%), Query Frame = 3
Query:   48 DQSFAYANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSL----DGSGARRRYSLNSVSKYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFN 455
            D+   +A QL   +VLPM ++   EL + +I+ KAGPGA LS SDIA+ LPTKN DAP MLDRILRLLASYS++ CSL    DG    R Y L SV K+   N+DGVS+ P   M QDKV +ESW HLKDAILEGGIPFN
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGK-VERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFN 154          
BLAST of CF503845 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 5.900e-37
Identity = 80/142 (56.34%), Postives = 103/142 (72.54%), Query Frame = 3
Query:   42 ERDQSFAYANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSL----DGSGARRRYSLNSVSKYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFN 455
            E +++   A +LA  +VLPM +++  EL + ++I K+GPGA +S S++AAQLPT+N DAP MLDRILRLLASYSV+ C+L    DG G  R YSL  V K+   N+DGVS+   L M QDKV +ESW HLKDA+LEGGIPFN
Sbjct:   15 EEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDG-GIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFN 155          
BLAST of CF503845 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 7.706e-37
Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = 3
Query:   21 MGSI---VDGERDQSFAYANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSL----DGSGARRRYSLNSVSKYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFN 455
            MGSI   +    D++F +A QLA  +VLPM ++A  EL + +I+ K+GPGA +S S++AAQLPTKN +AP MLDR+ RLLA+YSV+ C+L    DG    R YSL  V K+   N DGVS+ P L M QDKV +ESW HL DA+L+GG+PFN
Sbjct:    1 MGSINQSLTQTEDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGR-VERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFN 151          
BLAST of CF503845 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.006e-36
Identity = 78/140 (55.71%), Postives = 101/140 (72.14%), Query Frame = 3
Query:   48 DQSFAYANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSL----DGSGARRRYSLNSVSKYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFN 455
            D++F +A QLA  +VLPM +++  EL + +I+ KAGPGA +S S++AAQLPTKN +AP MLDR+LRLLA+YSV+ C+L    DG    R YSL  V K    N DGVS+ P L M QDKV +ESW HL DA+L+GG+PFN
Sbjct:   13 DEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGR-VERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFN 151          
BLAST of CF503845 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.928e-36
Identity = 80/140 (57.14%), Postives = 99/140 (70.71%), Query Frame = 3
Query:   48 DQSFAYANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSL----DGSGARRRYSLNSVSKYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFN 455
            +++  +A QLA  +VLPM ++   EL + +I+ KAGPGA LS S+IA+ LPTKN DAP MLDRILRLLASYS++ CSL    DG    R Y L  V K+   N+DGVS+ P   M QDKV +ESW +LKDAILEGGIPFN
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGK-VERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFN 155          
BLAST of CF503845 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.928e-36
Identity = 75/139 (53.96%), Postives = 99/139 (71.22%), Query Frame = 3
Query:   48 DQSFAYANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSLDG---SGARRRYSLNSVSKYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFN 455
            +++  +A  LA  +VLPM +++  EL + ++I KAGPGA +S S++AAQLPT N +AP MLDRILRLLA+YSV++C L+     G  R Y L  V K+   N DGVS+ P L M QDKV +ESW HLKDA+L+GGIPFN
Sbjct:    4 EEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFN 142          
BLAST of CF503845 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 4.995e-36
Identity = 81/140 (57.86%), Postives = 97/140 (69.29%), Query Frame = 3
Query:   48 DQSFAYANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSL----DGSGARRRYSLNSVSKYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFN 455
            D+   +A QL   +VLPM ++   EL + +I+ KAGPGA L  SDIA+ LPTKN +AP MLDRILRLLASYS++ CSL    DG    R Y L SV K+   N+DGVS+ P   M QDKV +ESW HLKDAILEGGIPFN
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGK-VERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFN 154          
BLAST of CF503845 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 6.524e-36
Identity = 79/140 (56.43%), Postives = 99/140 (70.71%), Query Frame = 3
Query:   48 DQSFAYANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSL----DGSGARRRYSLNSVSKYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFN 455
            +++  +A QLA  +VLPM ++   EL + +I+ KAGPGA LS S+IA+ LPTKN DAP MLDRILRLLASYS++ CSL    DG    R Y L  V K+   N+DGVS+ P   M QDKV +ESW +LKDAIL+GGIPFN
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGK-VERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFN 155          
BLAST of CF503845 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 8.520e-36
Identity = 79/140 (56.43%), Postives = 99/140 (70.71%), Query Frame = 3
Query:   48 DQSFAYANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVECSL----DGSGARRRYSLNSVSKYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFN 455
            +++  +A QLA  +VLPM ++A  EL + +I+ KAGPG  LS +DIA+QLPTKN DAP MLDR+LRLLASYS++  SL    DG    R Y L  V K+   N++GVS+ P   M QDKV LESW HLKDA+LEGGIPFN
Sbjct:   17 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRMLRLLASYSILTYSLRTLADGK-VERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFN 155          
BLAST of CF503845 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 9.420e-35
Identity = 71/144 (49.31%), Postives = 99/144 (68.75%), Query Frame = 3
Query:   33 VDGERDQSFAYANQLAMGTVLPMAMQAVYELGIFQIIDKAGPGAKLSASDIAAQLPTKNKDAPTMLDRILRLLASYSVVEC---SLDGSGARRRYSLNSVSKYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFN 455
            ++ + +++F +A QLA  +VLPM +++  EL + ++I K+G GA +S  D+AAQLPT N DA  MLDRILRLL SY+++EC   +L   G  R Y L  V K+   N+DGVS+ P   M QDKV +ESW HL DA+++GGIPFN
Sbjct:   10 INSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFN 153          
The following BLAST results are available for this feature:
BLAST of CF503845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT3_POPKI2.028e-3759.29Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_CATRO5.900e-3756.34Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_CAPCH7.706e-3753.29Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_CAPAN1.006e-3655.71Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_POPKI2.928e-3657.14Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_COFCA2.928e-3653.96Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT2_POPTM4.995e-3657.86Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_POPTM6.524e-3656.43Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_PRUDU8.520e-3656.43Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_OCIBA9.420e-3549.31Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-332 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503845 ID=CF503845; Name=CF503845; organism=Citrus sinensis; type=EST; length=455bp
AGAAATTCAAGAAACTTAAAATGGGTTCTATAGTTGATGGAGAAAGAGAC
CAAAGCTTTGCATATGCTAATCAATTGGCGATGGGTACAGTGCTACCCAT
GGCCATGCAAGCGGTGTATGAGCTAGGCATTTTCCAGATCATAGACAAAG
CTGGTCCTGGTGCAAAGCTCTCTGCTTCAGATATTGCAGCCCAGTTGCCC
ACCAAGAACAAAGACGCACCCACGATGCTGGATCGGATTCTCAGGCTTCT
GGCTAGCTACAGTGTTGTTGAATGCTCACTTGATGGTTCTGGTGCCCGGA
GACGATATAGTTTAAATTCTGTCTCCAAATACTATGTGCCTAACAAAGAT
GGCGTCTCACTAGGCCCCGCATTGCAAATGATTCAGGACAAGGTCTTTCT
GGAGAGCTGGTCCCATCTCAAAGATGCTATTCTTGAAGGAGGAATTCCAT
TTAAT
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