CF503859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: AB3C_ARATH (ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 2.095e-45 Identity = 88/118 (74.58%), Postives = 99/118 (83.90%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 KAPLIQHF+ET+SG+TTIRSF QE RF NM L DGYSRP F+ A AMEWL FRLDMLS++TF FSLVFL+SIP G IDP++AGLAVTYGL+LN LQA LIW C +ENKIISVERI Sbjct: 1123 KAPLIQHFSETISGATTIRSFSQEFRFRSDNMRLSDGYSRPKFYTAGAMEWLCFRLDMLSSLTFVFSLVFLVSIPTGVIDPSLAGLAVTYGLSLNTLQAWLIWTLCNLENKIISVERI 1240
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: AB9C_ARATH (ABC transporter C family member 9 OS=Arabidopsis thaliana GN=ABCC9 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.718e-39 Identity = 74/118 (62.71%), Postives = 99/118 (83.90%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 +AP++ HFAE+++G+TTIR+FDQ RFI +N+ L+D +SRP FHVA+AMEWL FRL++LS+ FAFSLV L+++P+G I+P+IAGL VTYGL+LN LQA +IW C ENK+ISVERI Sbjct: 1093 RAPILHHFAESLAGATTIRAFDQRDRFISSNLVLIDSHSRPWFHVASAMEWLSFRLNLLSHFVFAFSLVLLVTLPEGVINPSIAGLGVTYGLSLNVLQATVIWNICNAENKMISVERI 1210
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: AB15C_ARATH (Putative ABC transporter C family member 15 OS=Arabidopsis thaliana GN=ABCC15 PE=5 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.718e-39 Identity = 74/118 (62.71%), Postives = 99/118 (83.90%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 +AP++ HFAE+++G+TTIR+FDQ RFI +N+ L+D +SRP FHVA+AMEWL FRL++LS+ FAFSLV L+++P+G I+P+IAGL VTYGL+LN LQA +IW C ENK+ISVERI Sbjct: 640 RAPILHHFAESLAGATTIRAFDQRDRFISSNLVLIDSHSRPWFHVASAMEWLSFRLNLLSHFVFAFSLVLLVTLPEGVINPSIAGLGVTYGLSLNVLQATVIWNICNAENKMISVERI 757
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: AB7C_ARATH (ABC transporter C family member 7 OS=Arabidopsis thaliana GN=ABCC7 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.231e-37 Identity = 75/118 (63.56%), Postives = 92/118 (77.97%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 ++PL+QHF+ET+SG TTIRSFDQE RF M L D YSR FH +AMEWL FRLD+LS + FA SLV L+S+P+G I+P+ AGLAVTY L LN+LQA LIW C +ENK+ISVER+ Sbjct: 1095 RSPLVQHFSETLSGITTIRSFDQEPRFRTDIMRLNDCYSRLRFHAISAMEWLCFRLDLLSTVAFALSLVILVSVPEGVINPSFAGLAVTYALNLNSLQATLIWTLCDLENKMISVERM 1212
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: AB6C_ARATH (ABC transporter C family member 6 OS=Arabidopsis thaliana GN=ABCC6 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 4.379e-35 Identity = 71/118 (60.17%), Postives = 88/118 (74.58%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 ++P++ HF+ET+SG TTIRSFDQE RF M L D YSR FH AMEWL FRL++LS FA SLV L+S P+G I+P++AGLA+TY L LN LQA LIW C +ENK+ISVER+ Sbjct: 1073 RSPVVHHFSETLSGITTIRSFDQEPRFRGDIMRLSDCYSRLKFHSTGAMEWLCFRLELLSTFAFASSLVILVSAPEGVINPSLAGLAITYALNLNTLQATLIWTLCDLENKMISVERM 1190
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: AB5C_ARATH (ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 1.234e-29 Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIF 359 K+P+I F E+++G+ TIR F QE RFI N+ L+D + RP F AA+EWL R+++LS + FAF +V L+S P G IDP++AGLAVTYGL LN + I C++ENKIIS+ERI+ Sbjct: 1122 KSPIIHLFGESIAGAATIRGFGQEKRFIKRNLYLLDCFVRPFFCSIAAIEWLCLRMELLSTLVFAFCMVLLVSFPHGTIDPSMAGLAVTYGLNLNGRLSRWILSFCKLENKIISIERIY 1240
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: AB14C_ARATH (ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.251e-22 Identity = 47/118 (39.83%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 KAP+I HF+E+++G TIR+F ++ F N++ ++ R FH + EWLGFRL+++ + S +F++ +P I P GL+++YGL+LN + I+L+C +ENK++SVERI Sbjct: 1151 KAPVIHHFSESIAGVMTIRAFKKQPMFRQENVKRVNANLRMDFHNNGSNEWLGFRLELIGSWVLCISALFMVMLPSNIIKPENVGLSLSYGLSLNGVLFWAIYLSCFIENKMVSVERI 1268
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 7.252e-22 Identity = 47/118 (39.83%), Postives = 79/118 (66.95%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 KAP+I HF+E+++G TIRSF ++ F N++ ++ R FH + EWLGFRL+++ + S +F++ +P I P GL+++YGL+LN++ I+++C +ENK++SVERI Sbjct: 1128 KAPIIHHFSESIAGVMTIRSFRKQELFRQENVKRVNDNLRMDFHNNGSNEWLGFRLELVGSWVLCISALFMVLLPSNVIRPENVGLSLSYGLSLNSVLFFAIYMSCFVENKMVSVERI 1245
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: AB8C_ARATH (ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 7.505e-19 Identity = 50/118 (42.37%), Postives = 68/118 (57.63%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 KAP++ + AET G TIR+F RF + L+D + F AAMEW+ R++ L N+T + LI IPKG+I P + GL+++Y LTL Q L C + N IISVERI Sbjct: 899 KAPVMNYAAETSLGVVTIRAFGTAERFFKNYLNLVDADAVLFFLSNAAMEWVILRIETLQNVTLFTCALLLILIPKGYIAPGLVGLSLSYALTLTQTQVFLTRWYCTLSNSIISVERI 1016
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.118e-17 Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 21 HFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 H AE+V+G+ TIR+FD+E RF ++ L+D + P FH AA EWL RL+ +S I A + +I +P G G+A++YGL+LN + C + N IISVER+ Sbjct: 1003 HLAESVAGAITIRAFDEEERFFKKSLTLIDTNASPFFHSFAANEWLIQRLETVSAIVLASTAFCMILLPTGTFSSGFIGMALSYGLSLNMGLVYSVQNQCYLANWIISVERL 1114 The following BLAST results are available for this feature:
BLAST of CF503859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503859 ID=CF503859; Name=CF503859; organism=Citrus sinensis; type=EST; length=361bpback to top |