CF503863

Overview
NameCF503863
Unique NameCF503863
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length414
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2010 contig Csv1_Contig2010:48..461. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL54_ARATH (GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana GN=At3g27950 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.306e-39
Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1
Query:  100 CGFPAVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSSIRP--GGFSPFHLGIQISQFIQF 414
            C FPAV+NFGDSNSDTG ISAA+ +VPPPNG +FFG  +GR  DGRLIID I E + LPYL+PYLDSVG N+R+GANFATGGS IRP    FSPFHLG Q+SQFI F
Sbjct:   28 CNFPAVFNFGDSNSDTGAISAAIGEVPPPNGVAFFGRSAGRHSDGRLIIDFITENLTLPYLTPYLDSVGANYRHGANFATGGSCIRPTLACFSPFHLGTQVSQFIHF 134          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: FUCO3_ARATH (Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.144e-35
Identity = 70/112 (62.50%), Postives = 84/112 (75.00%), Query Frame = 1
Query:  100 CGFPAVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGG-------SSIRPGGFSPFHLGIQISQFIQF 414
            C FPA++NFGDSNSDTGG+SAA  Q  PP+G SFFG P+GR+CDGRL+ID IAE + LPYLS +LDSVG+NF +GANFAT G       S++R  GFSPF L +Q  QF  F
Sbjct:   26 CHFPAIFNFGDSNSDTGGLSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPYLSAFLDSVGSNFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNF 137          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL53_ARATH (GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana GN=At3g26430 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.278e-34
Identity = 67/112 (59.82%), Postives = 84/112 (75.00%), Query Frame = 1
Query:  100 CGFPAVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSSIRP-------GGFSPFHLGIQISQFIQF 414
            C FPA++NFGDSNSDTGG+SA+  Q P PNG++FF  PSGRF DGRLIID IAE++ LPYL+ +LDS+G+NF +GANFAT GS++RP        G SP  L +Q+ QF  F
Sbjct:   27 CNFPAIFNFGDSNSDTGGLSASFGQAPYPNGQTFFHSPSGRFSDGRLIIDFIAEELGLPYLNAFLDSIGSNFSHGANFATAGSTVRPPNATIAQSGVSPISLDVQLVQFSDF 138          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.069e-33
Identity = 68/113 (60.18%), Postives = 84/113 (74.34%), Query Frame = 1
Query:  100 CGFPAVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSSIR--------PGGFSPFHLGIQISQFIQF 414
            C FPA++NFGDSNSDTGG +AA   + PP GE+FF   +GR+ DGRLIID IAE   LPYLSPYL S+G+NF++GA+FAT GS+I+         GGFSPF+L +Q SQF QF
Sbjct:   30 CDFPAIFNFGDSNSDTGGKAAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIAESFNLPYLSPYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHGGFSPFYLDVQYSQFRQF 142          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.065e-33
Identity = 70/112 (62.50%), Postives = 83/112 (74.11%), Query Frame = 1
Query:  100 CGFPAVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSSIR-------PGGFSPFHLGIQISQFIQF 414
            C FPA+YNFGDSNSDTGGISAA   +  P G+ FF  P+GR  DGRL ID IAE++ LPYLS YL+S+G+NFR+GANFATGGS+IR         G SPF L +QI+QF QF
Sbjct:   37 CTFPAIYNFGDSNSDTGGISAAFEPIRDPYGQGFFHRPTGRDSDGRLTIDFIAERLGLPYLSAYLNSLGSNFRHGANFATGGSTIRRQNETIFQYGISPFSLDMQIAQFDQF 148          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL61_ARATH (GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana GN=At4g01130 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.123e-25
Identity = 58/112 (51.79%), Postives = 75/112 (66.96%), Query Frame = 1
Query:  100 CGFPAVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGS-------SIRPGGFSPFHLGIQISQFIQF 414
            C F A++NFGDSNSDTGG  AA      P G ++F  P+GR  DGRLIID +A+ + +P+LSPYL S+G++FR+GANFAT  S       S+   G SPF L IQ++Q  QF
Sbjct:   30 CDFEAIFNFGDSNSDTGGFWAAFPAQSGPWGMTYFKKPAGRASDGRLIIDFLAKSLGMPFLSPYLQSIGSDFRHGANFATLASTVLLPNTSLFVSGISPFSLAIQLNQMKQF 141          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL49_ARATH (GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana GN=At3g05180 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.079e-25
Identity = 63/139 (45.32%), Postives = 88/139 (63.31%), Query Frame = 1
Query:   19 LFYAYL-LPIFAFMGGPMATMGGASLKGCGFPAVYNFGDSNSDTGGISAAMTQVPPPNGE-SFFGHP-SGRFCDGRLIIDLIAEKVKLPYLSPYLDSVG-TNFRNGANFATGGSSIR---PGGFSPFHLGIQISQFIQF 414
            LF+  L L +F  +   ++ + G+      FPAV+NFGDSNSDTG +S+ +  +P P+ E +FF  P SGRFC+GRLI+D + E +  PYL PYLDS+    +R G NFA   S+I+      +SPF  G+Q+SQFI F
Sbjct:    4 LFHTLLRLLLFVAISHTLSPLAGSFRISNDFPAVFNFGDSNSDTGELSSGLGFLPQPSYEITFFRSPTSGRFCNGRLIVDFLMEAIDRPYLRPYLDSISRQTYRRGCNFAAAASTIQKANAASYSPFGFGVQVSQFITF 142          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL2_ARATH (GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.453e-24
Identity = 61/133 (45.86%), Postives = 80/133 (60.15%), Query Frame = 1
Query:   22 FYAYLLPIFAFMGGPMATMGGASLKGCGFPAVYNFGDSNSDTGGISAAMT-QVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDS-VGTNFRNGANFATGGSSIRPGGFSPFHLGIQISQFIQF 414
            F   LLP    +   +A  GG  +     P ++NFGDSNSDTGG+ A +   +  PNG SFF   +GR  DGRL+ID + + +    L+PYLDS VG+ F+NGANFA  GSS  P  + PF L IQ+ QF+ F
Sbjct:   11 FLLVLLPFILILRQNLAVAGGCQVP----PVIFNFGDSNSDTGGLVAGLGYSIGLPNGRSFFQRSTGRLSDGRLVIDFLCQSLNTSLLNPYLDSLVGSKFQNGANFAIVGSSTLP-RYVPFALNIQLMQFLHF 138          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL22_ARATH (GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana GN=At1g54790 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.453e-24
Identity = 55/108 (50.93%), Postives = 76/108 (70.37%), Query Frame = 1
Query:  106 FPAVYNFGDSNSDTGGISAAM-TQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVG-TNFRNGANFATGGSSI---RPGGFSPFHLGIQISQFIQF 414
            +P+ +NFGDSNSDTG + A +  ++  PNG++ F   S RFCDGRL+ID + +++ LP+L+PYLDS+G  NF+ G NFA  GS+I    P   SPF   +QISQFI+F
Sbjct:   29 YPSAFNFGDSNSDTGDLVAGLGIRLDLPNGQNSFKTSSQRFCDGRLVIDFLMDEMDLPFLNPYLDSLGLPNFKKGCNFAAAGSTILPANPTSVSPFSFDLQISQFIRF 136          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL60_ARATH (GDSL esterase/lipase At3g62280 OS=Arabidopsis thaliana GN=At3g62280 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.960e-21
Identity = 51/103 (49.51%), Postives = 66/103 (64.08%), Query Frame = 1
Query:  109 PAVYNFGDSNSDTGGISAAM-TQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSSIRPGGFSPFHLGIQISQFIQF 414
            P + NFGDSNSDTGG+ A +   +  P+G +FF   +GR  DGRLI+D   E +K+ YLSPYLDS+  NF+ G NFA  G++  P     F L IQI QF+ F
Sbjct:   35 PILINFGDSNSDTGGVLAGVGLPIGLPHGITFFHRGTGRLGDGRLIVDFYCEHLKMTYLSPYLDSLSPNFKRGVNFAVSGATALP--IFSFPLAIQIRQFVHF 135          
The following BLAST results are available for this feature:
BLAST of CF503863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
GDL54_ARATH1.306e-3971.96GDSL esterase/lipase At3g27950 OS=Arabidopsis thal... [more]
FUCO3_ARATH1.144e-3562.50Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FX... [more]
GDL53_ARATH6.278e-3459.82GDSL esterase/lipase At3g26430 OS=Arabidopsis thal... [more]
EST_HEVBR4.069e-3360.18Esterase OS=Hevea brasiliensis PE=1 SV=1[more]
GDL76_ARATH9.065e-3362.50GDSL esterase/lipase At5g14450 OS=Arabidopsis thal... [more]
GDL61_ARATH3.123e-2551.79GDSL esterase/lipase At4g01130 OS=Arabidopsis thal... [more]
GDL49_ARATH4.079e-2545.32GDSL esterase/lipase At3g05180 OS=Arabidopsis thal... [more]
GDL2_ARATH3.453e-2445.86GDSL esterase/lipase At1g09390 OS=Arabidopsis thal... [more]
GDL22_ARATH3.453e-2450.93GDSL esterase/lipase At1g54790 OS=Arabidopsis thal... [more]
GDL60_ARATH7.960e-2149.51GDSL esterase/lipase At3g62280 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-350 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503863 ID=CF503863; Name=CF503863; organism=Citrus sinensis; type=EST; length=414bp
GAGCCTGTCGATATAAGGTTATTTTATGCATACCTGCTTCCCATCTTTGC
GTTCATGGGAGGACCAATGGCAACAATGGGTGGCGCCAGTTTAAAGGGAT
GTGGGTTCCCCGCTGTGTACAATTTCGGTGACTCAAATTCAGACACCGGA
GGAATCTCAGCTGCAATGACGCAAGTTCCTCCACCAAATGGTGAATCTTT
CTTTGGACACCCATCAGGAAGATTTTGTGACGGCCGTCTCATCATTGATT
TAATTGCTGAGAAAGTGAAGTTGCCATATCTGAGTCCGTACCTGGATTCA
GTGGGCACAAATTTCAGGAATGGTGCCAATTTTGCAACTGGAGGGTCATC
TATTCGACCTGGTGGCTTTAGTCCATTCCATCTTGGCATTCAAATTTCCC
AATTTATACAATTC
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